EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000010735 (Gene tree)
Gene ID: -
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a%2C subunit 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 6642 bases
Position: chr5:18920464-18927105
Accession: ZDB-GENE-030616-156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015107	PRP21_like_P	PF12230.8	1.2e-51	1	1
ENSAPEP00000015107	Surp	PF01805.20	6.3e-46	1	2
ENSAPEP00000015107	Surp	PF01805.20	6.3e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015500	-	4151	-	ENSAPEP00000015107	786 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010735	sf3a1	99	85.419	ENSG00000099995	SF3A1	100	83.000	Homo_sapiens
ENSAPEG00000010735	sf3a1	100	99.618	ENSAPOG00000020465	sf3a1	100	99.618	Acanthochromis_polyacanthus
ENSAPEG00000010735	sf3a1	99	85.548	ENSAMEG00000007737	SF3A1	100	83.167	Ailuropoda_melanoleuca
ENSAPEG00000010735	sf3a1	100	96.819	ENSACIG00000020672	sf3a1	100	96.819	Amphilophus_citrinellus
ENSAPEG00000010735	sf3a1	100	99.873	ENSAOCG00000003060	sf3a1	100	99.873	Amphiprion_ocellaris
ENSAPEG00000010735	sf3a1	97	96.863	ENSATEG00000021201	sf3a1	96	96.863	Anabas_testudineus
ENSAPEG00000010735	sf3a1	96	84.980	ENSAPLG00000009057	SF3A1	100	84.802	Anas_platyrhynchos
ENSAPEG00000010735	sf3a1	100	81.852	ENSACAG00000009415	SF3A1	100	82.099	Anolis_carolinensis
ENSAPEG00000010735	sf3a1	99	85.038	ENSANAG00000032045	SF3A1	100	83.375	Aotus_nancymaae
ENSAPEG00000010735	sf3a1	100	96.565	ENSACLG00000012622	sf3a1	100	96.565	Astatotilapia_calliptera
ENSAPEG00000010735	sf3a1	99	89.682	ENSAMXG00000005382	sf3a1	99	89.936	Astyanax_mexicanus
ENSAPEG00000010735	sf3a1	99	85.038	ENSBTAG00000003390	SF3A1	100	83.375	Bos_taurus
ENSAPEG00000010735	sf3a1	81	45.472	WBGene00004188	prp-21	59	50.508	Caenorhabditis_elegans
ENSAPEG00000010735	sf3a1	99	84.910	ENSCJAG00000010370	SF3A1	100	83.250	Callithrix_jacchus
ENSAPEG00000010735	sf3a1	99	85.038	ENSCAFG00000012559	SF3A1	100	83.375	Canis_familiaris
ENSAPEG00000010735	sf3a1	99	85.038	ENSCAFG00020000838	SF3A1	100	83.375	Canis_lupus_dingo
ENSAPEG00000010735	sf3a1	99	85.166	ENSCHIG00000018642	SF3A1	100	83.500	Capra_hircus
ENSAPEG00000010735	sf3a1	99	85.548	ENSTSYG00000004739	SF3A1	100	83.375	Carlito_syrichta
ENSAPEG00000010735	sf3a1	97	68.594	ENSCAPG00000015414	SF3A1	99	68.857	Cavia_aperea
ENSAPEG00000010735	sf3a1	99	85.038	ENSCPOG00000014589	SF3A1	100	83.375	Cavia_porcellus
ENSAPEG00000010735	sf3a1	99	85.038	ENSCCAG00000032006	SF3A1	100	83.375	Cebus_capucinus
ENSAPEG00000010735	sf3a1	99	84.910	ENSCATG00000029241	SF3A1	100	83.000	Cercocebus_atys
ENSAPEG00000010735	sf3a1	97	86.144	ENSCLAG00000006508	SF3A1	100	83.000	Chinchilla_lanigera
ENSAPEG00000010735	sf3a1	99	84.910	ENSCSAG00000009470	SF3A1	100	83.000	Chlorocebus_sabaeus
ENSAPEG00000010735	sf3a1	59	90.476	ENSCHOG00000005201	SF3A1	61	90.000	Choloepus_hoffmanni
ENSAPEG00000010735	sf3a1	100	82.346	ENSCPBG00000007595	SF3A1	100	82.346	Chrysemys_picta_bellii
ENSAPEG00000010735	sf3a1	92	63.158	ENSCSAVG00000005608	-	92	65.972	Ciona_savignyi
ENSAPEG00000010735	sf3a1	99	84.910	ENSCANG00000033564	SF3A1	100	83.000	Colobus_angolensis_palliatus
ENSAPEG00000010735	sf3a1	97	86.316	ENSCGRG00001008933	Sf3a1	100	83.270	Cricetulus_griseus_chok1gshd
ENSAPEG00000010735	sf3a1	97	86.316	ENSCGRG00000006127	Sf3a1	100	83.270	Cricetulus_griseus_crigri
ENSAPEG00000010735	sf3a1	100	92.513	ENSCSEG00000010792	sf3a1	100	92.513	Cynoglossus_semilaevis
ENSAPEG00000010735	sf3a1	100	93.011	ENSCVAG00000004560	sf3a1	100	93.011	Cyprinodon_variegatus
ENSAPEG00000010735	sf3a1	100	87.690	ENSDARG00000041887	sf3a1	100	90.909	Danio_rerio
ENSAPEG00000010735	sf3a1	99	85.696	ENSDNOG00000010629	SF3A1	98	84.030	Dasypus_novemcinctus
ENSAPEG00000010735	sf3a1	99	85.038	ENSDORG00000005613	Sf3a1	100	83.375	Dipodomys_ordii
ENSAPEG00000010735	sf3a1	83	61.582	FBgn0266917	Sf3a1	98	51.471	Drosophila_melanogaster
ENSAPEG00000010735	sf3a1	85	85.052	ENSETEG00000017194	SF3A1	95	85.650	Echinops_telfairi
ENSAPEG00000010735	sf3a1	97	67.790	ENSEBUG00000001285	sf3a1	95	70.013	Eptatretus_burgeri
ENSAPEG00000010735	sf3a1	99	85.038	ENSEASG00005010254	SF3A1	100	83.375	Equus_asinus_asinus
ENSAPEG00000010735	sf3a1	99	85.038	ENSECAG00000023962	SF3A1	100	83.375	Equus_caballus
ENSAPEG00000010735	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSAPEG00000010735	sf3a1	100	87.452	ENSELUG00000022578	sf3a1	100	86.946	Esox_lucius
ENSAPEG00000010735	sf3a1	99	84.910	ENSFCAG00000011932	SF3A1	100	83.250	Felis_catus
ENSAPEG00000010735	sf3a1	96	84.433	ENSFALG00000006944	SF3A1	100	83.753	Ficedula_albicollis
ENSAPEG00000010735	sf3a1	99	85.419	ENSFDAG00000009560	SF3A1	100	83.000	Fukomys_damarensis
ENSAPEG00000010735	sf3a1	100	93.901	ENSFHEG00000010866	sf3a1	100	93.901	Fundulus_heteroclitus
ENSAPEG00000010735	sf3a1	100	88.295	ENSGMOG00000016024	sf3a1	100	88.295	Gadus_morhua
ENSAPEG00000010735	sf3a1	96	85.092	ENSGALG00000007937	SF3A1	100	84.005	Gallus_gallus
ENSAPEG00000010735	sf3a1	100	94.663	ENSGAFG00000009111	sf3a1	100	94.663	Gambusia_affinis
ENSAPEG00000010735	sf3a1	100	91.288	ENSGACG00000011893	sf3a1	100	90.783	Gasterosteus_aculeatus
ENSAPEG00000010735	sf3a1	96	81.842	ENSGAGG00000000762	SF3A1	99	81.842	Gopherus_agassizii
ENSAPEG00000010735	sf3a1	99	85.419	ENSGGOG00000012631	SF3A1	100	83.000	Gorilla_gorilla
ENSAPEG00000010735	sf3a1	100	96.565	ENSHBUG00000015795	sf3a1	100	96.565	Haplochromis_burtoni
ENSAPEG00000010735	sf3a1	99	84.910	ENSHGLG00000007907	SF3A1	100	83.250	Heterocephalus_glaber_female
ENSAPEG00000010735	sf3a1	99	84.910	ENSHGLG00100013799	SF3A1	100	83.250	Heterocephalus_glaber_male
ENSAPEG00000010735	sf3a1	100	90.089	ENSHCOG00000015423	sf3a1	100	89.835	Hippocampus_comes
ENSAPEG00000010735	sf3a1	98	86.658	ENSIPUG00000002470	sf3a1	98	87.500	Ictalurus_punctatus
ENSAPEG00000010735	sf3a1	97	86.144	ENSSTOG00000013892	SF3A1	100	83.648	Ictidomys_tridecemlineatus
ENSAPEG00000010735	sf3a1	99	85.419	ENSJJAG00000022566	Sf3a1	100	83.668	Jaculus_jaculus
ENSAPEG00000010735	sf3a1	100	93.766	ENSKMAG00000002400	sf3a1	100	93.766	Kryptolebias_marmoratus
ENSAPEG00000010735	sf3a1	100	93.639	ENSLBEG00000022974	sf3a1	100	93.257	Labrus_bergylta
ENSAPEG00000010735	sf3a1	100	84.324	ENSLACG00000003565	SF3A1	100	84.324	Latimeria_chalumnae
ENSAPEG00000010735	sf3a1	100	88.228	ENSLOCG00000008251	sf3a1	99	88.861	Lepisosteus_oculatus
ENSAPEG00000010735	sf3a1	97	56.718	ENSLAFG00000026032	-	97	56.298	Loxodonta_africana
ENSAPEG00000010735	sf3a1	99	85.422	ENSLAFG00000000448	SF3A1	100	83.500	Loxodonta_africana
ENSAPEG00000010735	sf3a1	99	84.783	ENSMFAG00000031979	SF3A1	100	82.875	Macaca_fascicularis
ENSAPEG00000010735	sf3a1	99	84.783	ENSMMUG00000005547	SF3A1	100	82.875	Macaca_mulatta
ENSAPEG00000010735	sf3a1	99	84.910	ENSMNEG00000037229	SF3A1	100	83.000	Macaca_nemestrina
ENSAPEG00000010735	sf3a1	99	84.910	ENSMLEG00000041908	SF3A1	100	83.000	Mandrillus_leucophaeus
ENSAPEG00000010735	sf3a1	99	96.159	ENSMAMG00000006460	sf3a1	98	96.159	Mastacembelus_armatus
ENSAPEG00000010735	sf3a1	100	96.565	ENSMZEG00005009633	sf3a1	100	96.565	Maylandia_zebra
ENSAPEG00000010735	sf3a1	96	85.092	ENSMGAG00000001330	SF3A1	100	84.981	Meleagris_gallopavo
ENSAPEG00000010735	sf3a1	93	82.016	ENSMAUG00000020317	Sf3a1	100	78.508	Mesocricetus_auratus
ENSAPEG00000010735	sf3a1	99	85.038	ENSMICG00000010038	SF3A1	100	82.375	Microcebus_murinus
ENSAPEG00000010735	sf3a1	97	85.882	ENSMOCG00000008438	Sf3a1	100	82.875	Microtus_ochrogaster
ENSAPEG00000010735	sf3a1	100	91.349	ENSMMOG00000015588	sf3a1	99	92.112	Mola_mola
ENSAPEG00000010735	sf3a1	99	83.162	ENSMODG00000009270	SF3A1	100	83.123	Monodelphis_domestica
ENSAPEG00000010735	sf3a1	100	95.063	ENSMALG00000000148	sf3a1	100	95.443	Monopterus_albus
ENSAPEG00000010735	sf3a1	99	84.704	MGP_CAROLIEiJ_G0016029	Sf3a1	99	83.165	Mus_caroli
ENSAPEG00000010735	sf3a1	99	84.704	ENSMUSG00000002129	Sf3a1	99	83.165	Mus_musculus
ENSAPEG00000010735	sf3a1	99	83.548	MGP_PahariEiJ_G0016862	Sf3a1	99	83.165	Mus_pahari
ENSAPEG00000010735	sf3a1	99	84.704	MGP_SPRETEiJ_G0016870	Sf3a1	99	83.165	Mus_spretus
ENSAPEG00000010735	sf3a1	99	84.399	ENSMPUG00000013144	SF3A1	100	83.250	Mustela_putorius_furo
ENSAPEG00000010735	sf3a1	99	84.910	ENSMLUG00000002139	SF3A1	100	83.522	Myotis_lucifugus
ENSAPEG00000010735	sf3a1	99	84.910	ENSNGAG00000016977	Sf3a1	100	83.125	Nannospalax_galili
ENSAPEG00000010735	sf3a1	100	96.066	ENSNBRG00000016642	sf3a1	100	96.066	Neolamprologus_brichardi
ENSAPEG00000010735	sf3a1	99	84.910	ENSNLEG00000003686	SF3A1	100	83.000	Nomascus_leucogenys
ENSAPEG00000010735	sf3a1	97	86.928	ENSOPRG00000016636	SF3A1	100	84.422	Ochotona_princeps
ENSAPEG00000010735	sf3a1	99	85.548	ENSODEG00000002571	SF3A1	100	83.249	Octodon_degus
ENSAPEG00000010735	sf3a1	100	96.947	ENSONIG00000010848	sf3a1	100	96.947	Oreochromis_niloticus
ENSAPEG00000010735	sf3a1	97	86.275	ENSOCUG00000007633	SF3A1	100	83.250	Oryctolagus_cuniculus
ENSAPEG00000010735	sf3a1	96	93.625	ENSORLG00000013050	sf3a1	99	93.360	Oryzias_latipes
ENSAPEG00000010735	sf3a1	99	91.165	ENSORLG00020003236	sf3a1	97	91.484	Oryzias_latipes_hni
ENSAPEG00000010735	sf3a1	100	93.257	ENSORLG00015017411	sf3a1	100	93.003	Oryzias_latipes_hsok
ENSAPEG00000010735	sf3a1	100	93.639	ENSOMEG00000013362	sf3a1	100	93.384	Oryzias_melastigma
ENSAPEG00000010735	sf3a1	99	85.677	ENSOGAG00000012931	SF3A1	100	83.250	Otolemur_garnettii
ENSAPEG00000010735	sf3a1	99	83.760	ENSOARG00000006849	SF3A1	100	82.000	Ovis_aries
ENSAPEG00000010735	sf3a1	99	84.645	ENSPPAG00000041790	SF3A1	100	82.250	Pan_paniscus
ENSAPEG00000010735	sf3a1	99	84.910	ENSPPRG00000004391	SF3A1	100	83.250	Panthera_pardus
ENSAPEG00000010735	sf3a1	99	85.290	ENSPTIG00000000844	SF3A1	99	84.774	Panthera_tigris_altaica
ENSAPEG00000010735	sf3a1	99	85.419	ENSPTRG00000014240	SF3A1	100	83.000	Pan_troglodytes
ENSAPEG00000010735	sf3a1	99	84.910	ENSPANG00000020772	SF3A1	100	83.000	Papio_anubis
ENSAPEG00000010735	sf3a1	82	91.209	ENSPSIG00000012803	SF3A1	99	91.209	Pelodiscus_sinensis
ENSAPEG00000010735	sf3a1	97	91.242	ENSPMGG00000023096	sf3a1	100	91.895	Periophthalmus_magnuspinnatus
ENSAPEG00000010735	sf3a1	97	86.184	ENSPEMG00000009494	Sf3a1	100	83.145	Peromyscus_maniculatus_bairdii
ENSAPEG00000010735	sf3a1	69	78.467	ENSPMAG00000007139	-	100	73.719	Petromyzon_marinus
ENSAPEG00000010735	sf3a1	97	84.967	ENSPCIG00000022692	SF3A1	100	83.501	Phascolarctos_cinereus
ENSAPEG00000010735	sf3a1	100	84.478	ENSPFOG00000016768	sf3a1	100	84.478	Poecilia_formosa
ENSAPEG00000010735	sf3a1	100	95.299	ENSPLAG00000017268	sf3a1	100	95.299	Poecilia_latipinna
ENSAPEG00000010735	sf3a1	96	95.038	ENSPMEG00000019811	sf3a1	100	95.038	Poecilia_mexicana
ENSAPEG00000010735	sf3a1	100	95.044	ENSPREG00000010347	sf3a1	100	95.044	Poecilia_reticulata
ENSAPEG00000010735	sf3a1	99	84.910	ENSPPYG00000011707	SF3A1	100	83.000	Pongo_abelii
ENSAPEG00000010735	sf3a1	58	84.762	ENSPCAG00000003266	SF3A1	57	84.762	Procavia_capensis
ENSAPEG00000010735	sf3a1	99	84.783	ENSPCOG00000026630	SF3A1	100	82.375	Propithecus_coquereli
ENSAPEG00000010735	sf3a1	95	85.676	ENSPVAG00000017719	SF3A1	94	85.944	Pteropus_vampyrus
ENSAPEG00000010735	sf3a1	100	96.565	ENSPNYG00000018706	sf3a1	100	96.565	Pundamilia_nyererei
ENSAPEG00000010735	sf3a1	99	89.809	ENSPNAG00000003721	sf3a1	99	89.554	Pygocentrus_nattereri
ENSAPEG00000010735	sf3a1	99	85.032	ENSRNOG00000005218	Sf3a1	99	83.227	Rattus_norvegicus
ENSAPEG00000010735	sf3a1	99	84.910	ENSRBIG00000032167	SF3A1	100	83.000	Rhinopithecus_bieti
ENSAPEG00000010735	sf3a1	99	84.910	ENSRROG00000044908	SF3A1	100	83.000	Rhinopithecus_roxellana
ENSAPEG00000010735	sf3a1	94	86.259	ENSSBOG00000021960	SF3A1	98	86.527	Saimiri_boliviensis_boliviensis
ENSAPEG00000010735	sf3a1	100	80.203	ENSSHAG00000003666	SF3A1	99	80.964	Sarcophilus_harrisii
ENSAPEG00000010735	sf3a1	100	90.139	ENSSFOG00015004579	sf3a1	100	91.024	Scleropages_formosus
ENSAPEG00000010735	sf3a1	100	91.985	ENSSMAG00000004275	sf3a1	100	91.476	Scophthalmus_maximus
ENSAPEG00000010735	sf3a1	100	96.819	ENSSDUG00000022219	sf3a1	100	96.819	Seriola_dumerili
ENSAPEG00000010735	sf3a1	100	96.819	ENSSLDG00000012642	sf3a1	100	96.819	Seriola_lalandi_dorsalis
ENSAPEG00000010735	sf3a1	97	83.268	ENSSARG00000005960	SF3A1	99	83.529	Sorex_araneus
ENSAPEG00000010735	sf3a1	97	84.286	ENSSPUG00000018863	SF3A1	100	83.147	Sphenodon_punctatus
ENSAPEG00000010735	sf3a1	100	98.473	ENSSPAG00000011856	sf3a1	100	98.473	Stegastes_partitus
ENSAPEG00000010735	sf3a1	99	84.399	ENSSSCG00000010002	SF3A1	100	83.250	Sus_scrofa
ENSAPEG00000010735	sf3a1	96	85.000	ENSTGUG00000010547	SF3A1	99	85.622	Taeniopygia_guttata
ENSAPEG00000010735	sf3a1	100	90.204	ENSTRUG00000006118	sf3a1	100	90.076	Takifugu_rubripes
ENSAPEG00000010735	sf3a1	62	88.848	ENSTNIG00000005713	sf3a1	88	88.496	Tetraodon_nigroviridis
ENSAPEG00000010735	sf3a1	98	79.297	ENSTBEG00000012771	SF3A1	100	77.736	Tupaia_belangeri
ENSAPEG00000010735	sf3a1	99	84.547	ENSTTRG00000001535	SF3A1	100	83.770	Tursiops_truncatus
ENSAPEG00000010735	sf3a1	99	82.872	ENSUAMG00000006750	SF3A1	99	82.368	Ursus_americanus
ENSAPEG00000010735	sf3a1	99	85.548	ENSUMAG00000016665	SF3A1	100	83.756	Ursus_maritimus
ENSAPEG00000010735	sf3a1	99	85.038	ENSVVUG00000003075	SF3A1	100	83.375	Vulpes_vulpes
ENSAPEG00000010735	sf3a1	100	79.151	ENSXETG00000016144	sf3a1	96	85.484	Xenopus_tropicalis
ENSAPEG00000010735	sf3a1	100	94.663	ENSXCOG00000015653	sf3a1	100	94.663	Xiphophorus_couchianus
ENSAPEG00000010735	sf3a1	100	94.917	ENSXMAG00000002753	sf3a1	100	94.917	Xiphophorus_maculatus