EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000010758 (Gene tree)
Gene ID: -
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 12846 bases
Position: chr9:29575657-29588502
Accession: ZDB-GENE-030131-5181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015281	Npa1	PF11707.8	3.8e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015677	-	6387	-	ENSAPEP00000015281	2128 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010758	urb1	98	53.221	ENSG00000142207	URB1	97	53.221	Homo_sapiens
ENSAPEG00000010758	urb1	100	83.979	ENSAPOG00000020308	urb1	100	83.979	Acanthochromis_polyacanthus
ENSAPEG00000010758	urb1	99	52.892	ENSAMEG00000011998	URB1	97	52.892	Ailuropoda_melanoleuca
ENSAPEG00000010758	urb1	96	70.079	ENSACIG00000003248	urb1	98	70.126	Amphilophus_citrinellus
ENSAPEG00000010758	urb1	100	89.173	ENSAOCG00000010364	urb1	100	89.173	Amphiprion_ocellaris
ENSAPEG00000010758	urb1	99	76.994	ENSATEG00000011790	urb1	97	76.994	Anabas_testudineus
ENSAPEG00000010758	urb1	96	55.776	ENSAPLG00000012791	URB1	97	56.326	Anas_platyrhynchos
ENSAPEG00000010758	urb1	99	42.845	ENSACAG00000002817	URB1	99	42.888	Anolis_carolinensis
ENSAPEG00000010758	urb1	99	52.898	ENSANAG00000024617	URB1	97	52.898	Aotus_nancymaae
ENSAPEG00000010758	urb1	99	77.719	ENSACLG00000024865	urb1	97	77.719	Astatotilapia_calliptera
ENSAPEG00000010758	urb1	99	56.270	ENSAMXG00000012306	urb1	97	56.270	Astyanax_mexicanus
ENSAPEG00000010758	urb1	98	51.255	ENSBTAG00000012412	URB1	96	51.569	Bos_taurus
ENSAPEG00000010758	urb1	99	53.165	ENSCJAG00000009118	URB1	97	52.544	Callithrix_jacchus
ENSAPEG00000010758	urb1	99	52.192	ENSCAFG00000008892	URB1	97	52.192	Canis_familiaris
ENSAPEG00000010758	urb1	99	52.471	ENSCAFG00020025994	-	97	52.471	Canis_lupus_dingo
ENSAPEG00000010758	urb1	99	52.270	ENSCAFG00020025987	-	97	52.270	Canis_lupus_dingo
ENSAPEG00000010758	urb1	99	41.899	ENSCHIG00000015645	URB1	99	41.768	Capra_hircus
ENSAPEG00000010758	urb1	99	51.844	ENSTSYG00000013286	URB1	97	51.844	Carlito_syrichta
ENSAPEG00000010758	urb1	97	50.943	ENSCAPG00000015589	URB1	96	50.943	Cavia_aperea
ENSAPEG00000010758	urb1	99	52.532	ENSCPOG00000006748	URB1	97	52.532	Cavia_porcellus
ENSAPEG00000010758	urb1	99	53.102	ENSCCAG00000021299	URB1	97	53.102	Cebus_capucinus
ENSAPEG00000010758	urb1	100	42.994	ENSCATG00000042630	URB1	99	42.994	Cercocebus_atys
ENSAPEG00000010758	urb1	100	42.963	ENSCLAG00000005262	URB1	99	42.919	Chinchilla_lanigera
ENSAPEG00000010758	urb1	99	50.830	ENSCSAG00000009584	URB1	97	50.934	Chlorocebus_sabaeus
ENSAPEG00000010758	urb1	99	55.277	ENSCPBG00000006454	URB1	97	55.799	Chrysemys_picta_bellii
ENSAPEG00000010758	urb1	99	53.214	ENSCANG00000031088	URB1	97	53.319	Colobus_angolensis_palliatus
ENSAPEG00000010758	urb1	98	51.623	ENSCGRG00001010616	Urb1	97	50.947	Cricetulus_griseus_chok1gshd
ENSAPEG00000010758	urb1	97	52.155	ENSCGRG00000015840	Urb1	97	52.155	Cricetulus_griseus_crigri
ENSAPEG00000010758	urb1	99	73.319	ENSCSEG00000012616	urb1	96	73.319	Cynoglossus_semilaevis
ENSAPEG00000010758	urb1	95	69.468	ENSCVAG00000009076	urb1	99	69.868	Cyprinodon_variegatus
ENSAPEG00000010758	urb1	99	61.064	ENSDARG00000060308	urb1	97	61.170	Danio_rerio
ENSAPEG00000010758	urb1	85	53.571	ENSDNOG00000015586	URB1	96	53.571	Dasypus_novemcinctus
ENSAPEG00000010758	urb1	99	51.899	ENSDORG00000006735	Urb1	97	51.899	Dipodomys_ordii
ENSAPEG00000010758	urb1	85	52.823	ENSETEG00000009080	URB1	85	52.823	Echinops_telfairi
ENSAPEG00000010758	urb1	99	50.738	ENSEASG00005007711	URB1	97	50.738	Equus_asinus_asinus
ENSAPEG00000010758	urb1	99	52.321	ENSECAG00000013206	URB1	99	47.506	Equus_caballus
ENSAPEG00000010758	urb1	99	56.532	ENSELUG00000020516	urb1	94	63.166	Esox_lucius
ENSAPEG00000010758	urb1	99	52.737	ENSFCAG00000002177	URB1	99	41.460	Felis_catus
ENSAPEG00000010758	urb1	97	42.347	ENSFALG00000004636	URB1	98	42.328	Ficedula_albicollis
ENSAPEG00000010758	urb1	99	51.844	ENSFDAG00000007288	URB1	92	51.949	Fukomys_damarensis
ENSAPEG00000010758	urb1	100	61.710	ENSFHEG00000000202	urb1	96	69.800	Fundulus_heteroclitus
ENSAPEG00000010758	urb1	93	56.328	ENSGMOG00000001838	urb1	94	56.150	Gadus_morhua
ENSAPEG00000010758	urb1	98	45.547	ENSGALG00000015887	URB1	98	45.635	Gallus_gallus
ENSAPEG00000010758	urb1	99	65.544	ENSGAFG00000020694	urb1	98	67.173	Gambusia_affinis
ENSAPEG00000010758	urb1	99	77.717	ENSGACG00000011703	urb1	97	77.717	Gasterosteus_aculeatus
ENSAPEG00000010758	urb1	99	55.428	ENSGAGG00000022544	URB1	97	55.428	Gopherus_agassizii
ENSAPEG00000010758	urb1	99	53.635	ENSGGOG00000000285	URB1	97	53.635	Gorilla_gorilla
ENSAPEG00000010758	urb1	99	77.505	ENSHBUG00000001904	urb1	97	77.505	Haplochromis_burtoni
ENSAPEG00000010758	urb1	99	50.154	ENSHGLG00000004907	URB1	97	50.154	Heterocephalus_glaber_female
ENSAPEG00000010758	urb1	99	51.848	ENSHGLG00100010749	URB1	97	51.848	Heterocephalus_glaber_male
ENSAPEG00000010758	urb1	77	74.319	ENSHCOG00000018683	urb1	98	74.319	Hippocampus_comes
ENSAPEG00000010758	urb1	99	47.238	ENSIPUG00000014721	urb1	99	47.238	Ictalurus_punctatus
ENSAPEG00000010758	urb1	98	53.413	ENSSTOG00000004539	URB1	97	52.366	Ictidomys_tridecemlineatus
ENSAPEG00000010758	urb1	99	72.101	ENSKMAG00000006001	urb1	99	73.990	Kryptolebias_marmoratus
ENSAPEG00000010758	urb1	96	69.187	ENSLBEG00000027208	urb1	99	69.140	Labrus_bergylta
ENSAPEG00000010758	urb1	99	42.882	ENSLACG00000017059	URB1	100	42.943	Latimeria_chalumnae
ENSAPEG00000010758	urb1	99	64.899	ENSLOCG00000009190	urb1	97	64.899	Lepisosteus_oculatus
ENSAPEG00000010758	urb1	99	52.727	ENSLAFG00000010407	URB1	96	52.727	Loxodonta_africana
ENSAPEG00000010758	urb1	99	53.158	ENSMFAG00000034391	URB1	94	53.263	Macaca_fascicularis
ENSAPEG00000010758	urb1	99	53.053	ENSMMUG00000010295	URB1	97	53.158	Macaca_mulatta
ENSAPEG00000010758	urb1	99	51.684	ENSMNEG00000032981	URB1	97	51.789	Macaca_nemestrina
ENSAPEG00000010758	urb1	99	53.319	ENSMLEG00000041435	URB1	97	53.425	Mandrillus_leucophaeus
ENSAPEG00000010758	urb1	99	70.139	ENSMAMG00000011238	urb1	99	70.139	Mastacembelus_armatus
ENSAPEG00000010758	urb1	99	72.618	ENSMZEG00005011862	urb1	97	72.538	Maylandia_zebra
ENSAPEG00000010758	urb1	97	46.047	ENSMGAG00000014512	URB1	98	46.092	Meleagris_gallopavo
ENSAPEG00000010758	urb1	88	52.853	ENSMAUG00000010516	Urb1	92	52.263	Mesocricetus_auratus
ENSAPEG00000010758	urb1	99	52.643	ENSMICG00000016424	URB1	97	52.643	Microcebus_murinus
ENSAPEG00000010758	urb1	99	41.775	ENSMOCG00000012613	Urb1	99	41.732	Microtus_ochrogaster
ENSAPEG00000010758	urb1	99	42.092	ENSMODG00000021076	URB1	99	42.092	Monodelphis_domestica
ENSAPEG00000010758	urb1	99	71.202	ENSMALG00000017411	urb1	99	71.202	Monopterus_albus
ENSAPEG00000010758	urb1	99	51.217	MGP_CAROLIEiJ_G0020948	Urb1	96	51.217	Mus_caroli
ENSAPEG00000010758	urb1	99	42.057	ENSMUSG00000039929	Urb1	99	42.014	Mus_musculus
ENSAPEG00000010758	urb1	99	51.474	MGP_PahariEiJ_G0016653	Urb1	96	51.474	Mus_pahari
ENSAPEG00000010758	urb1	99	42.194	MGP_SPRETEiJ_G0021854	Urb1	99	42.151	Mus_spretus
ENSAPEG00000010758	urb1	99	51.899	ENSMPUG00000001123	URB1	97	51.899	Mustela_putorius_furo
ENSAPEG00000010758	urb1	99	51.435	ENSNGAG00000001905	Urb1	96	51.435	Nannospalax_galili
ENSAPEG00000010758	urb1	83	70.201	ENSNBRG00000001049	urb1	99	69.854	Neolamprologus_brichardi
ENSAPEG00000010758	urb1	96	52.532	ENSNLEG00000026872	URB1	95	52.848	Nomascus_leucogenys
ENSAPEG00000010758	urb1	95	44.550	ENSMEUG00000010828	URB1	92	44.868	Notamacropus_eugenii
ENSAPEG00000010758	urb1	99	50.475	ENSOPRG00000013482	URB1	97	50.475	Ochotona_princeps
ENSAPEG00000010758	urb1	99	53.198	ENSODEG00000002587	URB1	96	53.198	Octodon_degus
ENSAPEG00000010758	urb1	99	77.932	ENSONIG00000005599	urb1	97	77.932	Oreochromis_niloticus
ENSAPEG00000010758	urb1	99	42.782	ENSOCUG00000009381	URB1	99	42.608	Oryctolagus_cuniculus
ENSAPEG00000010758	urb1	99	74.200	ENSORLG00000003429	urb1	97	74.200	Oryzias_latipes
ENSAPEG00000010758	urb1	99	74.414	ENSORLG00020013785	urb1	97	74.528	Oryzias_latipes_hni
ENSAPEG00000010758	urb1	99	71.786	ENSORLG00015019421	urb1	97	71.786	Oryzias_latipes_hsok
ENSAPEG00000010758	urb1	84	67.040	ENSOMEG00000002094	urb1	98	67.074	Oryzias_melastigma
ENSAPEG00000010758	urb1	99	52.447	ENSOGAG00000017140	URB1	97	52.447	Otolemur_garnettii
ENSAPEG00000010758	urb1	94	51.761	ENSOARG00000013679	URB1	90	50.777	Ovis_aries
ENSAPEG00000010758	urb1	99	53.319	ENSPPAG00000003423	URB1	97	53.319	Pan_paniscus
ENSAPEG00000010758	urb1	99	52.787	ENSPPRG00000023131	URB1	97	52.787	Panthera_pardus
ENSAPEG00000010758	urb1	87	51.913	ENSPTIG00000016125	URB1	89	51.913	Panthera_tigris_altaica
ENSAPEG00000010758	urb1	99	53.109	ENSPTRG00000013852	URB1	97	53.109	Pan_troglodytes
ENSAPEG00000010758	urb1	98	54.435	ENSPANG00000021964	URB1	97	53.319	Papio_anubis
ENSAPEG00000010758	urb1	99	51.182	ENSPKIG00000003683	urb1	99	51.427	Paramormyrops_kingsleyae
ENSAPEG00000010758	urb1	98	51.592	ENSPEMG00000021205	Urb1	95	51.592	Peromyscus_maniculatus_bairdii
ENSAPEG00000010758	urb1	67	39.021	ENSPMAG00000009733	URB1	81	38.546	Petromyzon_marinus
ENSAPEG00000010758	urb1	99	52.211	ENSPCIG00000016350	URB1	97	52.211	Phascolarctos_cinereus
ENSAPEG00000010758	urb1	96	74.078	ENSPLAG00000004371	urb1	97	74.194	Poecilia_latipinna
ENSAPEG00000010758	urb1	99	74.414	ENSPMEG00000006634	urb1	97	74.520	Poecilia_mexicana
ENSAPEG00000010758	urb1	99	73.885	ENSPREG00000013453	urb1	97	74.098	Poecilia_reticulata
ENSAPEG00000010758	urb1	99	43.304	ENSPPYG00000011359	URB1	99	42.975	Pongo_abelii
ENSAPEG00000010758	urb1	97	50.577	ENSPCAG00000007430	URB1	93	50.577	Procavia_capensis
ENSAPEG00000010758	urb1	99	53.079	ENSPCOG00000022695	URB1	97	53.185	Propithecus_coquereli
ENSAPEG00000010758	urb1	99	51.271	ENSPVAG00000000889	URB1	97	51.271	Pteropus_vampyrus
ENSAPEG00000010758	urb1	100	73.376	ENSPNYG00000010589	urb1	100	73.330	Pundamilia_nyererei
ENSAPEG00000010758	urb1	99	49.174	ENSPNAG00000019324	urb1	99	49.272	Pygocentrus_nattereri
ENSAPEG00000010758	urb1	99	50.526	ENSRNOG00000002080	Urb1	96	50.526	Rattus_norvegicus
ENSAPEG00000010758	urb1	99	52.687	ENSRBIG00000033122	URB1	97	52.792	Rhinopithecus_bieti
ENSAPEG00000010758	urb1	99	52.687	ENSRROG00000040237	URB1	97	52.792	Rhinopithecus_roxellana
ENSAPEG00000010758	urb1	98	53.838	ENSSBOG00000027672	URB1	97	53.115	Saimiri_boliviensis_boliviensis
ENSAPEG00000010758	urb1	99	53.151	ENSSHAG00000005140	URB1	97	53.151	Sarcophilus_harrisii
ENSAPEG00000010758	urb1	92	62.474	ENSSFOG00015000339	urb1	96	63.002	Scleropages_formosus
ENSAPEG00000010758	urb1	99	80.340	ENSSMAG00000003782	urb1	97	80.340	Scophthalmus_maximus
ENSAPEG00000010758	urb1	100	81.885	ENSSDUG00000012313	urb1	97	81.885	Seriola_dumerili
ENSAPEG00000010758	urb1	100	81.152	ENSSLDG00000023179	urb1	97	81.152	Seriola_lalandi_dorsalis
ENSAPEG00000010758	urb1	99	55.094	ENSSPUG00000012447	URB1	97	55.094	Sphenodon_punctatus
ENSAPEG00000010758	urb1	99	87.821	ENSSPAG00000006325	urb1	97	87.821	Stegastes_partitus
ENSAPEG00000010758	urb1	99	52.261	ENSSSCG00000032024	URB1	97	52.261	Sus_scrofa
ENSAPEG00000010758	urb1	73	54.026	ENSTGUG00000013442	URB1	96	54.026	Taeniopygia_guttata
ENSAPEG00000010758	urb1	99	73.376	ENSTRUG00000009372	urb1	97	73.376	Takifugu_rubripes
ENSAPEG00000010758	urb1	98	72.944	ENSTNIG00000016277	urb1	97	72.944	Tetraodon_nigroviridis
ENSAPEG00000010758	urb1	68	49.138	ENSTBEG00000010044	URB1	65	49.138	Tupaia_belangeri
ENSAPEG00000010758	urb1	90	50.945	ENSTTRG00000007712	URB1	89	51.111	Tursiops_truncatus
ENSAPEG00000010758	urb1	99	52.576	ENSUAMG00000012231	URB1	96	52.576	Ursus_americanus
ENSAPEG00000010758	urb1	85	55.489	ENSUMAG00000017419	URB1	91	52.119	Ursus_maritimus
ENSAPEG00000010758	urb1	64	62.400	ENSVPAG00000001164	URB1	61	62.400	Vicugna_pacos
ENSAPEG00000010758	urb1	98	54.443	ENSVVUG00000000551	URB1	97	52.516	Vulpes_vulpes
ENSAPEG00000010758	urb1	99	44.717	ENSXETG00000009895	urb1	99	44.349	Xenopus_tropicalis
ENSAPEG00000010758	urb1	100	64.849	ENSXCOG00000005500	urb1	100	64.939	Xiphophorus_couchianus
ENSAPEG00000010758	urb1	100	65.096	ENSXMAG00000007253	urb1	100	65.186	Xiphophorus_maculatus