EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000010913 (Gene tree)
Gene ID: -
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: SR-related CTD-associated factor 4b
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 24495 bases
Position: chr9:29590690-29615184
Accession: ZDB-GENE-050506-42
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015334	RRM_1	PF00076.22	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015733	-	3088	-	ENSAPEP00000015334	754 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010913	scaf4b	61	66.216	ENSAPOG00000002946	scaf4a	63	59.567	Acanthochromis_polyacanthus
ENSAPEG00000010913	scaf4b	100	94.048	ENSAPOG00000019615	scaf4b	100	94.577	Acanthochromis_polyacanthus
ENSAPEG00000010913	scaf4b	54	76.923	ENSAOCG00000000615	scaf4a	63	58.845	Amphiprion_ocellaris
ENSAPEG00000010913	scaf4b	100	99.469	ENSAOCG00000010433	scaf4b	100	99.469	Amphiprion_ocellaris
ENSAPEG00000010913	scaf4b	98	77.540	ENSATEG00000011758	scaf4b	100	77.273	Anabas_testudineus
ENSAPEG00000010913	scaf4b	66	59.574	ENSACAG00000002569	SCAF4	62	57.194	Anolis_carolinensis
ENSAPEG00000010913	scaf4b	100	80.423	ENSACLG00000024833	scaf4b	100	79.101	Astatotilapia_calliptera
ENSAPEG00000010913	scaf4b	55	73.418	ENSCJAG00000008993	SCAF4	57	64.734	Callithrix_jacchus
ENSAPEG00000010913	scaf4b	53	74.051	ENSCAFG00020026019	SCAF4	77	52.126	Canis_lupus_dingo
ENSAPEG00000010913	scaf4b	53	73.418	ENSTSYG00000011344	SCAF4	52	64.734	Carlito_syrichta
ENSAPEG00000010913	scaf4b	71	53.601	ENSCSEG00000019549	scaf4a	60	55.172	Cynoglossus_semilaevis
ENSAPEG00000010913	scaf4b	100	64.351	ENSCSEG00000012808	-	99	64.089	Cynoglossus_semilaevis
ENSAPEG00000010913	scaf4b	100	71.900	ENSCVAG00000009142	scaf4b	100	71.900	Cyprinodon_variegatus
ENSAPEG00000010913	scaf4b	99	47.514	ENSDARG00000077093	scaf4a	79	46.597	Danio_rerio
ENSAPEG00000010913	scaf4b	53	67.974	ENSDARG00000018854	scaf4b	68	57.193	Danio_rerio
ENSAPEG00000010913	scaf4b	61	53.191	ENSEBUG00000003891	SCAF8	53	51.923	Eptatretus_burgeri
ENSAPEG00000010913	scaf4b	62	51.471	ENSELUG00000002779	SCAF8	78	48.163	Esox_lucius
ENSAPEG00000010913	scaf4b	100	74.406	ENSFHEG00000007634	scaf4b	100	74.406	Fundulus_heteroclitus
ENSAPEG00000010913	scaf4b	56	68.862	ENSGMOG00000015188	scaf4a	55	59.623	Gadus_morhua
ENSAPEG00000010913	scaf4b	52	72.857	ENSGACG00000020580	scaf4a	50	59.470	Gasterosteus_aculeatus
ENSAPEG00000010913	scaf4b	58	61.386	ENSHBUG00000007920	scaf4a	59	50.434	Haplochromis_burtoni
ENSAPEG00000010913	scaf4b	55	75.316	ENSJJAG00000019447	Scaf4	58	65.044	Jaculus_jaculus
ENSAPEG00000010913	scaf4b	100	76.649	ENSKMAG00000005742	scaf4b	100	76.649	Kryptolebias_marmoratus
ENSAPEG00000010913	scaf4b	76	55.510	ENSLBEG00000014675	scaf4a	56	54.365	Labrus_bergylta
ENSAPEG00000010913	scaf4b	84	56.508	ENSLOCG00000009162	scaf4a	85	47.495	Lepisosteus_oculatus
ENSAPEG00000010913	scaf4b	79	54.380	ENSMALG00000013825	scaf4a	68	58.303	Monopterus_albus
ENSAPEG00000010913	scaf4b	71	67.087	ENSONIG00000005610	scaf4b	87	76.289	Oreochromis_niloticus
ENSAPEG00000010913	scaf4b	100	69.404	ENSORLG00000003420	scaf4b	100	70.238	Oryzias_latipes
ENSAPEG00000010913	scaf4b	100	69.444	ENSORLG00020013853	scaf4b	100	70.277	Oryzias_latipes_hni
ENSAPEG00000010913	scaf4b	59	64.824	ENSPKIG00000022408	scaf4a	70	61.172	Paramormyrops_kingsleyae
ENSAPEG00000010913	scaf4b	57	52.465	ENSPMAG00000006192	SCAF8	64	56.000	Petromyzon_marinus
ENSAPEG00000010913	scaf4b	98	55.531	ENSPFOG00000003261	scaf4b	78	71.852	Poecilia_formosa
ENSAPEG00000010913	scaf4b	79	54.225	ENSPFOG00000017156	scaf4a	67	57.746	Poecilia_formosa
ENSAPEG00000010913	scaf4b	100	69.494	ENSPLAG00000004403	-	100	69.620	Poecilia_latipinna
ENSAPEG00000010913	scaf4b	100	69.747	ENSPMEG00000006666	-	100	69.747	Poecilia_mexicana
ENSAPEG00000010913	scaf4b	100	69.406	ENSPREG00000013510	scaf4b	100	69.406	Poecilia_reticulata
ENSAPEG00000010913	scaf4b	55	73.418	ENSPCOG00000018710	SCAF4	58	58.364	Propithecus_coquereli
ENSAPEG00000010913	scaf4b	100	80.291	ENSPNYG00000010526	scaf4b	100	78.968	Pundamilia_nyererei
ENSAPEG00000010913	scaf4b	98	75.887	ENSPNAG00000015199	-	56	75.887	Pygocentrus_nattereri
ENSAPEG00000010913	scaf4b	62	44.318	ENSSFOG00015006338	scaf4a	80	45.775	Scleropages_formosus
ENSAPEG00000010913	scaf4b	100	79.030	ENSSMAG00000003738	scaf4b	100	78.506	Scophthalmus_maximus
ENSAPEG00000010913	scaf4b	100	83.071	ENSSDUG00000012380	scaf4b	100	82.808	Seriola_dumerili
ENSAPEG00000010913	scaf4b	100	82.940	ENSSLDG00000023152	-	100	82.677	Seriola_lalandi_dorsalis
ENSAPEG00000010913	scaf4b	100	62.781	ENSTRUG00000009536	-	100	62.119	Takifugu_rubripes
ENSAPEG00000010913	scaf4b	60	60.825	ENSTNIG00000016885	SCAF8	56	48.026	Tetraodon_nigroviridis