EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000011117 (Gene tree)
Gene ID: -
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 14587 bases
Position: chr3:19927815-19942401
Accession: ZDB-GENE-021125-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015725	ResIII	PF04851.15	9.3e-11	1	1
ENSAPEP00000015744	ResIII	PF04851.15	1.7e-08	1	1
ENSAPEP00000015725	DEAD	PF00270.29	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000016154	-	2553	-	ENSAPEP00000015744	850 (aa)	-	-
ENSAPET00000016134	-	5441	-	ENSAPEP00000015725	1036 (aa)	-	UPI000B9077CC

Gene Model

Click here to download ENSAPEG00000011117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000011117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000011117	smarca5	50	33.049	ENSAPEG00000001673	rad54b	58	33.465
ENSAPEG00000011117	smarca5	56	40.323	ENSAPEG00000001422	hells	73	41.443
ENSAPEG00000011117	smarca5	60	39.147	ENSAPEG00000017450	chd1l	59	39.162
ENSAPEG00000011117	smarca5	50	31.953	ENSAPEG00000022533	ERCC6L	51	32.406
ENSAPEG00000011117	smarca5	50	31.250	ENSAPEG00000020658	rad54l	65	32.627
ENSAPEG00000011117	smarca5	60	38.953	ENSAPEG00000017573	chd1l	59	39.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000011117	smarca5	99	84.080	ENSG00000102038	SMARCA1	92	83.709	Homo_sapiens
ENSAPEG00000011117	smarca5	100	100.000	ENSAPOG00000016035	smarca5	100	100.000	Acanthochromis_polyacanthus
ENSAPEG00000011117	smarca5	99	83.140	ENSAMEG00000015218	SMARCA1	92	82.692	Ailuropoda_melanoleuca
ENSAPEG00000011117	smarca5	99	98.345	ENSACIG00000016982	smarca5	100	98.446	Amphilophus_citrinellus
ENSAPEG00000011117	smarca5	100	100.000	ENSAOCG00000015578	smarca5	100	100.000	Amphiprion_ocellaris
ENSAPEG00000011117	smarca5	100	98.069	ENSATEG00000012894	smarca5	100	98.069	Anabas_testudineus
ENSAPEG00000011117	smarca5	99	84.670	ENSAPLG00000013149	SMARCA1	99	84.426	Anas_platyrhynchos
ENSAPEG00000011117	smarca5	99	85.006	ENSACAG00000011376	SMARCA1	93	84.939	Anolis_carolinensis
ENSAPEG00000011117	smarca5	99	78.538	ENSANAG00000023098	SMARCA1	92	78.893	Aotus_nancymaae
ENSAPEG00000011117	smarca5	100	97.683	ENSACLG00000025356	smarca5	100	97.683	Astatotilapia_calliptera
ENSAPEG00000011117	smarca5	99	84.752	ENSAMXG00000011227	smarca1	99	85.645	Astyanax_mexicanus
ENSAPEG00000011117	smarca5	99	96.454	ENSAMXG00000005709	smarca5	97	93.855	Astyanax_mexicanus
ENSAPEG00000011117	smarca5	99	84.323	ENSBTAG00000002292	SMARCA1	90	83.667	Bos_taurus
ENSAPEG00000011117	smarca5	99	66.824	WBGene00002169	isw-1	95	64.087	Caenorhabditis_elegans
ENSAPEG00000011117	smarca5	99	84.080	ENSCJAG00000002868	SMARCA1	92	83.709	Callithrix_jacchus
ENSAPEG00000011117	smarca5	99	75.410	ENSCAFG00000018673	SMARCA1	99	75.410	Canis_familiaris
ENSAPEG00000011117	smarca5	99	84.316	ENSCAFG00020001751	SMARCA1	92	83.811	Canis_lupus_dingo
ENSAPEG00000011117	smarca5	99	83.962	ENSCHIG00000009837	SMARCA1	92	83.402	Capra_hircus
ENSAPEG00000011117	smarca5	99	84.316	ENSTSYG00000004240	SMARCA1	94	84.697	Carlito_syrichta
ENSAPEG00000011117	smarca5	99	83.608	ENSCPOG00000013601	SMARCA1	93	82.383	Cavia_porcellus
ENSAPEG00000011117	smarca5	99	81.132	ENSCCAG00000030817	SMARCA1	92	81.045	Cebus_capucinus
ENSAPEG00000011117	smarca5	97	85.437	ENSCATG00000015921	SMARCA1	90	84.952	Cercocebus_atys
ENSAPEG00000011117	smarca5	99	83.608	ENSCLAG00000002171	SMARCA1	92	82.992	Chinchilla_lanigera
ENSAPEG00000011117	smarca5	99	84.080	ENSCSAG00000008460	SMARCA1	92	83.709	Chlorocebus_sabaeus
ENSAPEG00000011117	smarca5	99	84.788	ENSCPBG00000001146	SMARCA1	92	84.734	Chrysemys_picta_bellii
ENSAPEG00000011117	smarca5	99	77.267	ENSCING00000004110	swi/snf	99	74.155	Ciona_intestinalis
ENSAPEG00000011117	smarca5	99	77.358	ENSCSAVG00000004620	-	99	76.286	Ciona_savignyi
ENSAPEG00000011117	smarca5	99	84.080	ENSCANG00000007183	SMARCA1	92	83.811	Colobus_angolensis_palliatus
ENSAPEG00000011117	smarca5	99	83.137	ENSCGRG00001010776	Smarca1	92	82.684	Cricetulus_griseus_chok1gshd
ENSAPEG00000011117	smarca5	97	84.223	ENSCGRG00000015301	Smarca1	94	83.227	Cricetulus_griseus_crigri
ENSAPEG00000011117	smarca5	99	98.463	ENSCSEG00000000328	smarca5	100	97.394	Cynoglossus_semilaevis
ENSAPEG00000011117	smarca5	99	97.872	ENSCVAG00000008668	smarca5	99	97.872	Cyprinodon_variegatus
ENSAPEG00000011117	smarca5	99	83.045	ENSDARG00000012776	smarca1	96	82.915	Danio_rerio
ENSAPEG00000011117	smarca5	99	95.508	ENSDARG00000052348	smarca5	100	91.506	Danio_rerio
ENSAPEG00000011117	smarca5	97	85.073	ENSDNOG00000004315	SMARCA1	90	84.632	Dasypus_novemcinctus
ENSAPEG00000011117	smarca5	97	85.194	ENSDORG00000009270	Smarca1	90	84.845	Dipodomys_ordii
ENSAPEG00000011117	smarca5	97	79.252	FBgn0011604	Iswi	97	74.400	Drosophila_melanogaster
ENSAPEG00000011117	smarca5	89	78.571	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSAPEG00000011117	smarca5	99	83.630	ENSEBUG00000001239	smarca5	99	80.834	Eptatretus_burgeri
ENSAPEG00000011117	smarca5	99	80.913	ENSEASG00005008218	SMARCA1	99	79.735	Equus_asinus_asinus
ENSAPEG00000011117	smarca5	99	84.316	ENSECAG00000012106	SMARCA1	92	83.709	Equus_caballus
ENSAPEG00000011117	smarca5	79	87.151	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSAPEG00000011117	smarca5	99	84.634	ENSELUG00000010515	smarca1	95	85.377	Esox_lucius
ENSAPEG00000011117	smarca5	99	84.198	ENSFCAG00000018496	SMARCA1	92	83.709	Felis_catus
ENSAPEG00000011117	smarca5	93	86.076	ENSFALG00000000209	SMARCA1	98	85.339	Ficedula_albicollis
ENSAPEG00000011117	smarca5	97	83.732	ENSFDAG00000009818	SMARCA1	93	83.246	Fukomys_damarensis
ENSAPEG00000011117	smarca5	99	97.400	ENSFHEG00000007687	smarca5	100	94.365	Fundulus_heteroclitus
ENSAPEG00000011117	smarca5	97	85.732	ENSGALG00000008431	SMARCA1	94	85.340	Gallus_gallus
ENSAPEG00000011117	smarca5	100	97.297	ENSGAFG00000017731	smarca5	100	97.297	Gambusia_affinis
ENSAPEG00000011117	smarca5	99	84.652	ENSGAGG00000023575	SMARCA1	99	84.671	Gopherus_agassizii
ENSAPEG00000011117	smarca5	70	96.000	ENSGGOG00000012841	-	91	80.118	Gorilla_gorilla
ENSAPEG00000011117	smarca5	99	83.255	ENSHGLG00000003080	SMARCA1	92	82.787	Heterocephalus_glaber_female
ENSAPEG00000011117	smarca5	99	83.255	ENSHGLG00100001102	SMARCA1	98	82.281	Heterocephalus_glaber_male
ENSAPEG00000011117	smarca5	99	99.409	ENSHCOG00000005458	smarca5	100	97.782	Hippocampus_comes
ENSAPEG00000011117	smarca5	99	85.106	ENSIPUG00000016905	Smarca1	99	84.189	Ictalurus_punctatus
ENSAPEG00000011117	smarca5	99	95.390	ENSIPUG00000005229	SMARCA5	96	95.277	Ictalurus_punctatus
ENSAPEG00000011117	smarca5	99	83.844	ENSSTOG00000014524	SMARCA1	97	81.700	Ictidomys_tridecemlineatus
ENSAPEG00000011117	smarca5	99	83.137	ENSJJAG00000002593	Smarca1	92	82.263	Jaculus_jaculus
ENSAPEG00000011117	smarca5	99	98.109	ENSKMAG00000003777	smarca5	100	97.104	Kryptolebias_marmoratus
ENSAPEG00000011117	smarca5	99	98.345	ENSLBEG00000018112	smarca5	100	96.718	Labrus_bergylta
ENSAPEG00000011117	smarca5	93	98.354	ENSLBEG00000013295	SMARCA1	100	98.354	Labrus_bergylta
ENSAPEG00000011117	smarca5	99	85.511	ENSLACG00000016697	SMARCA1	95	85.258	Latimeria_chalumnae
ENSAPEG00000011117	smarca5	99	86.187	ENSLOCG00000014591	smarca1	95	85.949	Lepisosteus_oculatus
ENSAPEG00000011117	smarca5	99	83.373	ENSLAFG00000000896	SMARCA1	98	82.485	Loxodonta_africana
ENSAPEG00000011117	smarca5	99	84.080	ENSMFAG00000002117	SMARCA1	93	84.771	Macaca_fascicularis
ENSAPEG00000011117	smarca5	97	85.437	ENSMMUG00000008818	SMARCA1	97	84.829	Macaca_mulatta
ENSAPEG00000011117	smarca5	97	85.437	ENSMNEG00000041768	SMARCA1	93	84.771	Macaca_nemestrina
ENSAPEG00000011117	smarca5	99	84.080	ENSMLEG00000043198	SMARCA1	92	83.709	Mandrillus_leucophaeus
ENSAPEG00000011117	smarca5	99	99.409	ENSMAMG00000014294	smarca5	100	97.979	Mastacembelus_armatus
ENSAPEG00000011117	smarca5	100	97.683	ENSMZEG00005009369	smarca5	100	97.683	Maylandia_zebra
ENSAPEG00000011117	smarca5	99	83.372	ENSMGAG00000007042	SMARCA1	97	83.300	Meleagris_gallopavo
ENSAPEG00000011117	smarca5	97	84.466	ENSMAUG00000008133	Smarca1	90	83.121	Mesocricetus_auratus
ENSAPEG00000011117	smarca5	99	84.316	ENSMICG00000015768	SMARCA1	92	84.016	Microcebus_murinus
ENSAPEG00000011117	smarca5	99	83.019	ENSMOCG00000009464	Smarca1	92	81.957	Microtus_ochrogaster
ENSAPEG00000011117	smarca5	99	97.400	ENSMMOG00000005547	smarca5	100	97.384	Mola_mola
ENSAPEG00000011117	smarca5	99	84.770	ENSMODG00000013187	-	94	84.205	Monodelphis_domestica
ENSAPEG00000011117	smarca5	99	99.173	ENSMALG00000002081	smarca5	100	97.782	Monopterus_albus
ENSAPEG00000011117	smarca5	99	83.373	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.263	Mus_caroli
ENSAPEG00000011117	smarca5	99	83.373	ENSMUSG00000031099	Smarca1	92	82.263	Mus_musculus
ENSAPEG00000011117	smarca5	99	83.710	MGP_PahariEiJ_G0031579	Smarca1	92	82.546	Mus_pahari
ENSAPEG00000011117	smarca5	99	83.373	MGP_SPRETEiJ_G0034192	Smarca1	92	82.263	Mus_spretus
ENSAPEG00000011117	smarca5	99	83.140	ENSMPUG00000017423	SMARCA1	87	82.794	Mustela_putorius_furo
ENSAPEG00000011117	smarca5	99	81.671	ENSMLUG00000029614	SMARCA1	92	81.212	Myotis_lucifugus
ENSAPEG00000011117	smarca5	97	84.830	ENSNGAG00000006492	Smarca1	90	83.652	Nannospalax_galili
ENSAPEG00000011117	smarca5	99	98.582	ENSNBRG00000004463	smarca5	99	98.390	Neolamprologus_brichardi
ENSAPEG00000011117	smarca5	97	84.587	ENSNLEG00000015179	SMARCA1	94	84.043	Nomascus_leucogenys
ENSAPEG00000011117	smarca5	93	75.531	ENSMEUG00000008819	SMARCA1	97	76.319	Notamacropus_eugenii
ENSAPEG00000011117	smarca5	97	83.852	ENSODEG00000012163	SMARCA1	90	83.246	Octodon_degus
ENSAPEG00000011117	smarca5	100	97.780	ENSONIG00000009993	smarca5	100	97.780	Oreochromis_niloticus
ENSAPEG00000011117	smarca5	99	85.124	ENSOANG00000002862	SMARCA1	99	84.979	Ornithorhynchus_anatinus
ENSAPEG00000011117	smarca5	99	84.198	ENSOCUG00000001047	SMARCA1	92	83.811	Oryctolagus_cuniculus
ENSAPEG00000011117	smarca5	99	98.345	ENSORLG00000021998	smarca5	100	96.923	Oryzias_latipes
ENSAPEG00000011117	smarca5	99	98.463	ENSORLG00020017679	smarca5	100	97.016	Oryzias_latipes_hni
ENSAPEG00000011117	smarca5	99	98.345	ENSORLG00015017210	smarca5	100	97.303	Oryzias_latipes_hsok
ENSAPEG00000011117	smarca5	100	97.300	ENSOMEG00000000086	smarca5	100	97.300	Oryzias_melastigma
ENSAPEG00000011117	smarca5	97	84.431	ENSOGAG00000004399	SMARCA1	90	84.089	Otolemur_garnettii
ENSAPEG00000011117	smarca5	99	83.962	ENSOARG00000014638	SMARCA1	99	83.402	Ovis_aries
ENSAPEG00000011117	smarca5	99	84.080	ENSPPAG00000034647	SMARCA1	92	83.709	Pan_paniscus
ENSAPEG00000011117	smarca5	99	84.316	ENSPPRG00000008929	SMARCA1	92	83.811	Panthera_pardus
ENSAPEG00000011117	smarca5	99	82.197	ENSPTIG00000000915	SMARCA1	96	81.974	Panthera_tigris_altaica
ENSAPEG00000011117	smarca5	99	84.080	ENSPTRG00000049876	SMARCA1	90	84.952	Pan_troglodytes
ENSAPEG00000011117	smarca5	99	84.080	ENSPANG00000003871	SMARCA1	92	83.709	Papio_anubis
ENSAPEG00000011117	smarca5	97	84.318	ENSPKIG00000013411	smarca1	96	83.912	Paramormyrops_kingsleyae
ENSAPEG00000011117	smarca5	99	84.652	ENSPSIG00000010101	SMARCA1	99	84.671	Pelodiscus_sinensis
ENSAPEG00000011117	smarca5	97	84.587	ENSPEMG00000017503	Smarca1	90	83.439	Peromyscus_maniculatus_bairdii
ENSAPEG00000011117	smarca5	99	84.888	ENSPCIG00000015460	SMARCA1	96	84.631	Phascolarctos_cinereus
ENSAPEG00000011117	smarca5	100	97.394	ENSPFOG00000007649	smarca5	100	97.394	Poecilia_formosa
ENSAPEG00000011117	smarca5	100	97.394	ENSPLAG00000003363	smarca5	100	97.394	Poecilia_latipinna
ENSAPEG00000011117	smarca5	100	97.490	ENSPMEG00000019849	smarca5	100	97.490	Poecilia_mexicana
ENSAPEG00000011117	smarca5	100	97.394	ENSPREG00000023250	smarca5	100	97.394	Poecilia_reticulata
ENSAPEG00000011117	smarca5	99	80.778	ENSPPYG00000020703	SMARCA1	92	80.840	Pongo_abelii
ENSAPEG00000011117	smarca5	77	78.125	ENSPCOG00000020722	SMARCA1	93	80.415	Propithecus_coquereli
ENSAPEG00000011117	smarca5	90	83.484	ENSPVAG00000003805	SMARCA1	84	83.574	Pteropus_vampyrus
ENSAPEG00000011117	smarca5	58	98.417	ENSPNYG00000012299	smarca5	92	98.417	Pundamilia_nyererei
ENSAPEG00000011117	smarca5	99	83.137	ENSRNOG00000003762	Smarca1	92	82.480	Rattus_norvegicus
ENSAPEG00000011117	smarca5	99	84.080	ENSRROG00000034167	SMARCA1	92	83.811	Rhinopithecus_roxellana
ENSAPEG00000011117	smarca5	99	84.080	ENSSBOG00000020641	SMARCA1	99	83.607	Saimiri_boliviensis_boliviensis
ENSAPEG00000011117	smarca5	99	81.132	ENSSHAG00000013518	SMARCA1	99	79.733	Sarcophilus_harrisii
ENSAPEG00000011117	smarca5	99	85.579	ENSSFOG00015009043	smarca1	95	85.010	Scleropages_formosus
ENSAPEG00000011117	smarca5	99	94.208	ENSSFOG00015016794	smarca5	100	93.814	Scleropages_formosus
ENSAPEG00000011117	smarca5	99	97.991	ENSSMAG00000004801	smarca5	100	96.724	Scophthalmus_maximus
ENSAPEG00000011117	smarca5	100	97.973	ENSSDUG00000020690	smarca5	100	97.973	Seriola_dumerili
ENSAPEG00000011117	smarca5	100	97.973	ENSSLDG00000025190	smarca5	100	97.973	Seriola_lalandi_dorsalis
ENSAPEG00000011117	smarca5	88	85.116	ENSSARG00000000842	SMARCA1	81	83.986	Sorex_araneus
ENSAPEG00000011117	smarca5	97	85.732	ENSSPUG00000000590	SMARCA1	92	85.445	Sphenodon_punctatus
ENSAPEG00000011117	smarca5	100	99.421	ENSSPAG00000002894	smarca5	100	99.421	Stegastes_partitus
ENSAPEG00000011117	smarca5	99	84.080	ENSSSCG00000012649	SMARCA1	95	83.214	Sus_scrofa
ENSAPEG00000011117	smarca5	99	84.552	ENSTGUG00000003899	-	99	84.119	Taeniopygia_guttata
ENSAPEG00000011117	smarca5	100	96.622	ENSTRUG00000014094	smarca5	100	96.139	Takifugu_rubripes
ENSAPEG00000011117	smarca5	99	98.345	ENSTNIG00000017717	smarca5	97	95.870	Tetraodon_nigroviridis
ENSAPEG00000011117	smarca5	95	83.942	ENSTBEG00000014973	SMARCA1	89	82.638	Tupaia_belangeri
ENSAPEG00000011117	smarca5	97	80.622	ENSTTRG00000006168	SMARCA1	96	80.400	Tursiops_truncatus
ENSAPEG00000011117	smarca5	99	84.080	ENSUAMG00000020201	SMARCA1	92	83.504	Ursus_americanus
ENSAPEG00000011117	smarca5	99	79.953	ENSUMAG00000004073	SMARCA1	95	85.360	Ursus_maritimus
ENSAPEG00000011117	smarca5	75	87.629	ENSVPAG00000010492	-	77	87.197	Vicugna_pacos
ENSAPEG00000011117	smarca5	99	84.316	ENSVVUG00000008878	SMARCA1	98	85.059	Vulpes_vulpes
ENSAPEG00000011117	smarca5	99	84.716	ENSXETG00000001526	smarca1	97	84.671	Xenopus_tropicalis
ENSAPEG00000011117	smarca5	99	97.991	ENSXCOG00000011170	smarca5	100	97.423	Xiphophorus_couchianus
ENSAPEG00000011117	smarca5	100	97.201	ENSXMAG00000009678	smarca5	100	97.201	Xiphophorus_maculatus