EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000011605 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 44298 bases
Position: chr21:18598170-18642467
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018355	DRIM	PF07539.12	6.5e-176	1	1
ENSAPEP00000018437	DRIM	PF07539.12	4.2e-174	1	1
ENSAPEP00000018257	DRIM	PF07539.12	2e-173	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018946	-	8184	-	ENSAPEP00000018437	2727 (aa)	-	-
ENSAPET00000018765	-	8256	-	ENSAPEP00000018257	2751 (aa)	-	-
ENSAPET00000018863	-	8256	-	ENSAPEP00000018355	2751 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000011605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000011605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000011605	utp20	99	57.720	ENSG00000120800	UTP20	100	56.479	Homo_sapiens
ENSAPEG00000011605	utp20	100	92.013	ENSAPOG00000002429	utp20	100	92.040	Acanthochromis_polyacanthus
ENSAPEG00000011605	utp20	99	56.711	ENSAMEG00000016416	UTP20	100	56.480	Ailuropoda_melanoleuca
ENSAPEG00000011605	utp20	99	82.955	ENSACIG00000007987	utp20	100	81.585	Amphilophus_citrinellus
ENSAPEG00000011605	utp20	60	98.195	ENSAOCG00000015055	utp20	96	98.195	Amphiprion_ocellaris
ENSAPEG00000011605	utp20	98	81.411	ENSATEG00000005601	utp20	100	81.593	Anabas_testudineus
ENSAPEG00000011605	utp20	99	57.535	ENSAPLG00000015651	UTP20	100	57.403	Anas_platyrhynchos
ENSAPEG00000011605	utp20	99	56.456	ENSACAG00000011671	UTP20	100	55.922	Anolis_carolinensis
ENSAPEG00000011605	utp20	99	55.052	ENSANAG00000027152	UTP20	100	54.857	Aotus_nancymaae
ENSAPEG00000011605	utp20	96	86.052	ENSACLG00000008064	utp20	99	86.052	Astatotilapia_calliptera
ENSAPEG00000011605	utp20	100	66.148	ENSAMXG00000021039	utp20	100	65.982	Astyanax_mexicanus
ENSAPEG00000011605	utp20	99	57.591	ENSBTAG00000003239	UTP20	100	57.224	Bos_taurus
ENSAPEG00000011605	utp20	100	56.003	ENSCJAG00000001913	UTP20	100	56.053	Callithrix_jacchus
ENSAPEG00000011605	utp20	99	56.574	ENSCAFG00000006964	UTP20	100	56.483	Canis_familiaris
ENSAPEG00000011605	utp20	99	56.645	ENSCAFG00020024305	UTP20	100	56.554	Canis_lupus_dingo
ENSAPEG00000011605	utp20	99	57.133	ENSCHIG00000009221	UTP20	100	56.611	Capra_hircus
ENSAPEG00000011605	utp20	99	55.806	ENSTSYG00000003040	UTP20	100	55.769	Carlito_syrichta
ENSAPEG00000011605	utp20	99	53.095	ENSCAPG00000014920	UTP20	100	52.772	Cavia_aperea
ENSAPEG00000011605	utp20	100	54.750	ENSCPOG00000003129	UTP20	100	54.359	Cavia_porcellus
ENSAPEG00000011605	utp20	99	57.233	ENSCCAG00000031422	UTP20	100	56.388	Cebus_capucinus
ENSAPEG00000011605	utp20	99	55.744	ENSCATG00000035636	UTP20	100	54.220	Cercocebus_atys
ENSAPEG00000011605	utp20	100	56.444	ENSCLAG00000011569	UTP20	100	56.111	Chinchilla_lanigera
ENSAPEG00000011605	utp20	99	57.739	ENSCSAG00000003388	UTP20	100	56.656	Chlorocebus_sabaeus
ENSAPEG00000011605	utp20	92	72.727	ENSCHOG00000003532	UTP20	94	72.727	Choloepus_hoffmanni
ENSAPEG00000011605	utp20	95	57.635	ENSCPBG00000004844	UTP20	99	57.624	Chrysemys_picta_bellii
ENSAPEG00000011605	utp20	92	30.564	ENSCSAVG00000008252	-	95	30.368	Ciona_savignyi
ENSAPEG00000011605	utp20	97	57.847	ENSCANG00000034768	UTP20	100	57.827	Colobus_angolensis_palliatus
ENSAPEG00000011605	utp20	99	56.606	ENSCGRG00001017151	Utp20	100	55.678	Cricetulus_griseus_chok1gshd
ENSAPEG00000011605	utp20	99	56.360	ENSCGRG00000008595	Utp20	100	55.429	Cricetulus_griseus_crigri
ENSAPEG00000011605	utp20	98	77.460	ENSCSEG00000014760	utp20	99	77.313	Cynoglossus_semilaevis
ENSAPEG00000011605	utp20	99	78.152	ENSCVAG00000001727	utp20	100	78.259	Cyprinodon_variegatus
ENSAPEG00000011605	utp20	99	66.276	ENSDARG00000099280	utp20	99	66.133	Danio_rerio
ENSAPEG00000011605	utp20	99	56.514	ENSDNOG00000016845	UTP20	100	56.243	Dasypus_novemcinctus
ENSAPEG00000011605	utp20	97	58.556	ENSDORG00000014762	Utp20	98	60.242	Dipodomys_ordii
ENSAPEG00000011605	utp20	89	75.362	ENSETEG00000019983	UTP20	89	75.362	Echinops_telfairi
ENSAPEG00000011605	utp20	99	57.518	ENSEASG00005019981	UTP20	100	56.150	Equus_asinus_asinus
ENSAPEG00000011605	utp20	99	57.706	ENSECAG00000006876	UTP20	100	56.328	Equus_caballus
ENSAPEG00000011605	utp20	72	67.857	ENSEEUG00000003774	UTP20	75	66.176	Erinaceus_europaeus
ENSAPEG00000011605	utp20	100	70.772	ENSELUG00000000798	utp20	100	71.353	Esox_lucius
ENSAPEG00000011605	utp20	99	56.964	ENSFCAG00000006150	UTP20	100	56.554	Felis_catus
ENSAPEG00000011605	utp20	94	56.751	ENSFALG00000011135	UTP20	100	56.394	Ficedula_albicollis
ENSAPEG00000011605	utp20	93	53.088	ENSFDAG00000007567	UTP20	94	69.421	Fukomys_damarensis
ENSAPEG00000011605	utp20	98	77.592	ENSFHEG00000004142	utp20	100	76.996	Fundulus_heteroclitus
ENSAPEG00000011605	utp20	99	66.595	ENSGMOG00000006762	utp20	100	66.964	Gadus_morhua
ENSAPEG00000011605	utp20	99	57.939	ENSGALG00000011643	UTP20	100	57.872	Gallus_gallus
ENSAPEG00000011605	utp20	98	77.721	ENSGAFG00000006986	utp20	100	77.855	Gambusia_affinis
ENSAPEG00000011605	utp20	99	77.889	ENSGACG00000019092	utp20	100	77.738	Gasterosteus_aculeatus
ENSAPEG00000011605	utp20	68	60.128	ENSGAGG00000011169	UTP20	97	59.861	Gopherus_agassizii
ENSAPEG00000011605	utp20	99	56.929	ENSGGOG00000004904	UTP20	100	55.962	Gorilla_gorilla
ENSAPEG00000011605	utp20	100	81.270	ENSHBUG00000010613	utp20	100	81.627	Haplochromis_burtoni
ENSAPEG00000011605	utp20	100	55.167	ENSHGLG00000006422	UTP20	100	54.761	Heterocephalus_glaber_female
ENSAPEG00000011605	utp20	100	54.126	ENSHGLG00100001086	UTP20	100	53.764	Heterocephalus_glaber_male
ENSAPEG00000011605	utp20	94	81.579	ENSHCOG00000005421	utp20	97	81.579	Hippocampus_comes
ENSAPEG00000011605	utp20	100	66.228	ENSIPUG00000013717	utp20	100	65.802	Ictalurus_punctatus
ENSAPEG00000011605	utp20	100	57.016	ENSSTOG00000015995	UTP20	100	56.580	Ictidomys_tridecemlineatus
ENSAPEG00000011605	utp20	99	56.009	ENSJJAG00000019321	Utp20	100	55.611	Jaculus_jaculus
ENSAPEG00000011605	utp20	100	77.172	ENSKMAG00000005972	utp20	100	77.382	Kryptolebias_marmoratus
ENSAPEG00000011605	utp20	98	80.546	ENSLBEG00000000781	utp20	100	80.349	Labrus_bergylta
ENSAPEG00000011605	utp20	78	60.072	ENSLACG00000010098	UTP20	99	59.810	Latimeria_chalumnae
ENSAPEG00000011605	utp20	93	63.040	ENSLOCG00000015197	utp20	93	78.977	Lepisosteus_oculatus
ENSAPEG00000011605	utp20	100	56.210	ENSLAFG00000012983	UTP20	100	55.972	Loxodonta_africana
ENSAPEG00000011605	utp20	99	57.448	ENSMFAG00000037766	UTP20	100	56.301	Macaca_fascicularis
ENSAPEG00000011605	utp20	99	57.448	ENSMMUG00000012891	UTP20	100	56.337	Macaca_mulatta
ENSAPEG00000011605	utp20	99	56.497	ENSMNEG00000037418	UTP20	100	54.864	Macaca_nemestrina
ENSAPEG00000011605	utp20	99	55.932	ENSMLEG00000029148	UTP20	100	54.964	Mandrillus_leucophaeus
ENSAPEG00000011605	utp20	100	81.306	ENSMAMG00000002063	utp20	100	81.591	Mastacembelus_armatus
ENSAPEG00000011605	utp20	100	83.250	ENSMZEG00005018123	utp20	100	83.113	Maylandia_zebra
ENSAPEG00000011605	utp20	99	57.779	ENSMGAG00000011726	UTP20	100	57.771	Meleagris_gallopavo
ENSAPEG00000011605	utp20	63	56.685	ENSMAUG00000011898	Utp20	99	54.490	Mesocricetus_auratus
ENSAPEG00000011605	utp20	99	54.532	ENSMICG00000015736	UTP20	100	54.097	Microcebus_murinus
ENSAPEG00000011605	utp20	99	55.991	ENSMOCG00000015242	Utp20	100	55.821	Microtus_ochrogaster
ENSAPEG00000011605	utp20	99	76.282	ENSMMOG00000003360	utp20	100	75.641	Mola_mola
ENSAPEG00000011605	utp20	99	56.297	ENSMODG00000003141	UTP20	100	56.081	Monodelphis_domestica
ENSAPEG00000011605	utp20	100	80.380	ENSMALG00000002723	utp20	100	80.323	Monopterus_albus
ENSAPEG00000011605	utp20	99	56.542	MGP_CAROLIEiJ_G0015713	Utp20	100	56.154	Mus_caroli
ENSAPEG00000011605	utp20	99	56.670	ENSMUSG00000004356	Utp20	100	56.540	Mus_musculus
ENSAPEG00000011605	utp20	99	56.450	MGP_PahariEiJ_G0031372	Utp20	100	56.489	Mus_pahari
ENSAPEG00000011605	utp20	99	56.650	MGP_SPRETEiJ_G0016531	Utp20	94	69.048	Mus_spretus
ENSAPEG00000011605	utp20	100	56.603	ENSMPUG00000011641	UTP20	100	56.722	Mustela_putorius_furo
ENSAPEG00000011605	utp20	99	56.809	ENSMLUG00000002313	UTP20	100	56.662	Myotis_lucifugus
ENSAPEG00000011605	utp20	99	57.227	ENSNGAG00000013738	Utp20	100	56.190	Nannospalax_galili
ENSAPEG00000011605	utp20	80	92.537	ENSNBRG00000019464	utp20	99	92.537	Neolamprologus_brichardi
ENSAPEG00000011605	utp20	99	56.765	ENSNLEG00000006166	UTP20	100	56.565	Nomascus_leucogenys
ENSAPEG00000011605	utp20	91	81.481	ENSMEUG00000015457	UTP20	90	55.632	Notamacropus_eugenii
ENSAPEG00000011605	utp20	87	77.707	ENSOPRG00000010546	UTP20	87	77.707	Ochotona_princeps
ENSAPEG00000011605	utp20	100	55.880	ENSODEG00000013411	UTP20	100	55.394	Octodon_degus
ENSAPEG00000011605	utp20	100	83.245	ENSONIG00000009910	utp20	100	83.245	Oreochromis_niloticus
ENSAPEG00000011605	utp20	98	58.779	ENSOANG00000005578	UTP20	98	58.113	Ornithorhynchus_anatinus
ENSAPEG00000011605	utp20	99	56.562	ENSOCUG00000010475	UTP20	100	56.600	Oryctolagus_cuniculus
ENSAPEG00000011605	utp20	95	74.895	ENSORLG00000008900	utp20	99	74.895	Oryzias_latipes
ENSAPEG00000011605	utp20	95	75.070	ENSORLG00020005879	utp20	99	74.044	Oryzias_latipes_hni
ENSAPEG00000011605	utp20	98	73.196	ENSORLG00015002843	utp20	99	73.162	Oryzias_latipes_hsok
ENSAPEG00000011605	utp20	98	76.328	ENSOMEG00000023583	utp20	100	76.492	Oryzias_melastigma
ENSAPEG00000011605	utp20	99	55.920	ENSOGAG00000015130	UTP20	100	55.638	Otolemur_garnettii
ENSAPEG00000011605	utp20	99	57.245	ENSOARG00000014722	UTP20	100	57.037	Ovis_aries
ENSAPEG00000011605	utp20	99	57.675	ENSPPAG00000001381	UTP20	100	56.585	Pan_paniscus
ENSAPEG00000011605	utp20	99	56.964	ENSPPRG00000001026	UTP20	100	56.554	Panthera_pardus
ENSAPEG00000011605	utp20	99	56.893	ENSPTIG00000020972	UTP20	100	56.519	Panthera_tigris_altaica
ENSAPEG00000011605	utp20	99	57.629	ENSPTRG00000005349	UTP20	100	56.550	Pan_troglodytes
ENSAPEG00000011605	utp20	99	57.584	ENSPANG00000020388	UTP20	100	56.408	Papio_anubis
ENSAPEG00000011605	utp20	100	65.315	ENSPKIG00000007196	utp20	100	65.279	Paramormyrops_kingsleyae
ENSAPEG00000011605	utp20	94	57.460	ENSPSIG00000016689	UTP20	100	57.105	Pelodiscus_sinensis
ENSAPEG00000011605	utp20	100	75.900	ENSPMGG00000004066	utp20	100	76.007	Periophthalmus_magnuspinnatus
ENSAPEG00000011605	utp20	99	57.036	ENSPEMG00000024120	Utp20	100	56.945	Peromyscus_maniculatus_bairdii
ENSAPEG00000011605	utp20	99	55.599	ENSPCIG00000009298	UTP20	100	55.362	Phascolarctos_cinereus
ENSAPEG00000011605	utp20	92	78.374	ENSPFOG00000003312	utp20	100	78.580	Poecilia_formosa
ENSAPEG00000011605	utp20	98	77.461	ENSPLAG00000012874	utp20	100	77.611	Poecilia_latipinna
ENSAPEG00000011605	utp20	95	82.389	ENSPMEG00000005915	utp20	100	76.872	Poecilia_mexicana
ENSAPEG00000011605	utp20	98	77.154	ENSPREG00000013285	utp20	100	77.221	Poecilia_reticulata
ENSAPEG00000011605	utp20	88	56.384	ENSPPYG00000004871	UTP20	100	56.142	Pongo_abelii
ENSAPEG00000011605	utp20	81	70.707	ENSPCAG00000012791	UTP20	82	70.707	Procavia_capensis
ENSAPEG00000011605	utp20	96	57.048	ENSPCOG00000024948	UTP20	100	57.274	Propithecus_coquereli
ENSAPEG00000011605	utp20	99	55.603	ENSPVAG00000008113	UTP20	100	55.417	Pteropus_vampyrus
ENSAPEG00000011605	utp20	100	81.599	ENSPNYG00000011561	utp20	100	81.728	Pundamilia_nyererei
ENSAPEG00000011605	utp20	100	65.908	ENSPNAG00000006176	utp20	100	65.933	Pygocentrus_nattereri
ENSAPEG00000011605	utp20	99	56.404	ENSRNOG00000005823	Utp20	100	56.083	Rattus_norvegicus
ENSAPEG00000011605	utp20	99	56.140	ENSRBIG00000025384	UTP20	100	54.980	Rhinopithecus_bieti
ENSAPEG00000011605	utp20	99	57.811	ENSRROG00000041254	UTP20	100	56.585	Rhinopithecus_roxellana
ENSAPEG00000011605	utp20	99	57.460	ENSSBOG00000035762	UTP20	100	56.241	Saimiri_boliviensis_boliviensis
ENSAPEG00000011605	utp20	98	54.861	ENSSHAG00000002298	UTP20	99	54.830	Sarcophilus_harrisii
ENSAPEG00000011605	utp20	99	67.201	ENSSFOG00015001674	utp20	100	66.917	Scleropages_formosus
ENSAPEG00000011605	utp20	98	80.490	ENSSMAG00000016460	utp20	100	80.264	Scophthalmus_maximus
ENSAPEG00000011605	utp20	100	84.186	ENSSDUG00000013730	utp20	100	84.150	Seriola_dumerili
ENSAPEG00000011605	utp20	100	85.076	ENSSLDG00000012844	utp20	100	85.324	Seriola_lalandi_dorsalis
ENSAPEG00000011605	utp20	55	74.242	ENSSARG00000002796	-	55	74.242	Sorex_araneus
ENSAPEG00000011605	utp20	99	56.297	ENSSPUG00000004513	UTP20	99	55.635	Sphenodon_punctatus
ENSAPEG00000011605	utp20	100	86.974	ENSSPAG00000014674	utp20	100	87.152	Stegastes_partitus
ENSAPEG00000011605	utp20	99	56.709	ENSSSCG00000000869	UTP20	100	56.297	Sus_scrofa
ENSAPEG00000011605	utp20	76	57.328	ENSTGUG00000009053	-	100	57.249	Taeniopygia_guttata
ENSAPEG00000011605	utp20	99	78.436	ENSTRUG00000005849	utp20	99	78.872	Takifugu_rubripes
ENSAPEG00000011605	utp20	99	76.307	ENSTNIG00000006921	utp20	100	76.272	Tetraodon_nigroviridis
ENSAPEG00000011605	utp20	92	52.941	ENSTBEG00000011917	UTP20	92	53.059	Tupaia_belangeri
ENSAPEG00000011605	utp20	97	56.584	ENSTTRG00000017195	UTP20	98	56.515	Tursiops_truncatus
ENSAPEG00000011605	utp20	99	56.586	ENSUAMG00000016363	UTP20	100	56.469	Ursus_americanus
ENSAPEG00000011605	utp20	99	56.110	ENSUMAG00000000077	UTP20	100	55.831	Ursus_maritimus
ENSAPEG00000011605	utp20	89	57.613	ENSVPAG00000011620	UTP20	92	57.959	Vicugna_pacos
ENSAPEG00000011605	utp20	99	56.483	ENSVVUG00000018110	UTP20	100	56.377	Vulpes_vulpes
ENSAPEG00000011605	utp20	98	56.291	ENSXETG00000032346	UTP20	99	56.173	Xenopus_tropicalis
ENSAPEG00000011605	utp20	98	76.674	ENSXMAG00000006503	utp20	100	76.546	Xiphophorus_maculatus