EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000011679 (Gene tree)
Gene ID: -
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 11664 bases
Position: chr14:29379083-29390746
Accession: ZDB-GENE-990415-180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000016379	zf-CCCH	PF00642.24	3.5e-20	1	2
ENSAPEP00000016379	zf-CCCH	PF00642.24	3.5e-20	2	2
ENSAPEP00000016379	zf-CCHC	PF00098.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000016822	-	5071	-	ENSAPEP00000016379	265 (aa)	-	UPI000C310968

Gene Model

Click here to download ENSAPEG00000011679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000011679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000011679	cpsf4	100	84.815	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSAPEG00000011679	cpsf4	67	90.960	ENSAPOG00000004921	cpsf4	100	90.960	Acanthochromis_polyacanthus
ENSAPEG00000011679	cpsf4	100	85.185	ENSAMEG00000006252	CPSF4	100	85.185	Ailuropoda_melanoleuca
ENSAPEG00000011679	cpsf4	100	85.283	ENSACIG00000009248	cpsf4	100	85.660	Amphilophus_citrinellus
ENSAPEG00000011679	cpsf4	100	100.000	ENSAOCG00000019616	cpsf4	100	100.000	Amphiprion_ocellaris
ENSAPEG00000011679	cpsf4	100	94.007	ENSATEG00000007010	cpsf4	100	94.007	Anabas_testudineus
ENSAPEG00000011679	cpsf4	100	83.704	ENSACAG00000012941	CPSF4	89	83.704	Anolis_carolinensis
ENSAPEG00000011679	cpsf4	100	84.815	ENSANAG00000021360	CPSF4	100	84.815	Aotus_nancymaae
ENSAPEG00000011679	cpsf4	100	93.962	ENSACLG00000010374	cpsf4	100	93.962	Astatotilapia_calliptera
ENSAPEG00000011679	cpsf4	100	85.556	ENSAMXG00000031647	cpsf4	100	85.556	Astyanax_mexicanus
ENSAPEG00000011679	cpsf4	100	81.509	ENSBTAG00000002090	CPSF4	100	81.509	Bos_taurus
ENSAPEG00000011679	cpsf4	100	84.815	ENSCJAG00000015826	CPSF4	100	84.815	Callithrix_jacchus
ENSAPEG00000011679	cpsf4	100	85.185	ENSCAFG00000015036	CPSF4	99	86.826	Canis_familiaris
ENSAPEG00000011679	cpsf4	100	80.741	ENSCAFG00020014462	CPSF4	100	80.741	Canis_lupus_dingo
ENSAPEG00000011679	cpsf4	100	84.815	ENSCHIG00000014313	CPSF4	100	84.815	Capra_hircus
ENSAPEG00000011679	cpsf4	100	74.436	ENSTSYG00000014604	-	100	74.436	Carlito_syrichta
ENSAPEG00000011679	cpsf4	89	75.949	ENSTSYG00000008195	-	99	76.016	Carlito_syrichta
ENSAPEG00000011679	cpsf4	100	81.887	ENSTSYG00000005712	-	100	81.887	Carlito_syrichta
ENSAPEG00000011679	cpsf4	82	85.068	ENSCAPG00000013881	CPSF4	88	84.305	Cavia_aperea
ENSAPEG00000011679	cpsf4	100	81.509	ENSCPOG00000001783	CPSF4	100	81.509	Cavia_porcellus
ENSAPEG00000011679	cpsf4	100	84.815	ENSCCAG00000028291	CPSF4	100	84.815	Cebus_capucinus
ENSAPEG00000011679	cpsf4	100	84.815	ENSCATG00000038440	CPSF4	100	84.815	Cercocebus_atys
ENSAPEG00000011679	cpsf4	100	84.815	ENSCLAG00000007050	CPSF4	100	84.815	Chinchilla_lanigera
ENSAPEG00000011679	cpsf4	100	84.815	ENSCSAG00000017795	CPSF4	100	84.815	Chlorocebus_sabaeus
ENSAPEG00000011679	cpsf4	63	78.313	ENSCPBG00000010269	-	100	78.313	Chrysemys_picta_bellii
ENSAPEG00000011679	cpsf4	80	84.332	ENSCPBG00000020869	CPSF4	100	84.332	Chrysemys_picta_bellii
ENSAPEG00000011679	cpsf4	97	55.859	ENSCING00000021080	-	97	55.859	Ciona_intestinalis
ENSAPEG00000011679	cpsf4	96	54.417	ENSCSAVG00000011469	-	97	54.417	Ciona_savignyi
ENSAPEG00000011679	cpsf4	100	84.815	ENSCANG00000019384	CPSF4	100	84.815	Colobus_angolensis_palliatus
ENSAPEG00000011679	cpsf4	100	81.509	ENSCGRG00001024184	Cpsf4	100	81.509	Cricetulus_griseus_chok1gshd
ENSAPEG00000011679	cpsf4	100	85.185	ENSCGRG00000013892	Cpsf4	100	85.185	Cricetulus_griseus_crigri
ENSAPEG00000011679	cpsf4	100	91.698	ENSCSEG00000019055	cpsf4	100	91.698	Cynoglossus_semilaevis
ENSAPEG00000011679	cpsf4	100	90.943	ENSCVAG00000016528	cpsf4	100	90.943	Cyprinodon_variegatus
ENSAPEG00000011679	cpsf4	100	84.133	ENSDARG00000020217	cpsf4	100	84.133	Danio_rerio
ENSAPEG00000011679	cpsf4	100	85.185	ENSDNOG00000006344	CPSF4	100	85.185	Dasypus_novemcinctus
ENSAPEG00000011679	cpsf4	80	84.862	ENSDORG00000000742	Cpsf4	100	84.862	Dipodomys_ordii
ENSAPEG00000011679	cpsf4	100	54.515	FBgn0015621	Clp	99	54.967	Drosophila_melanogaster
ENSAPEG00000011679	cpsf4	71	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSAPEG00000011679	cpsf4	99	64.528	ENSEBUG00000012552	cpsf4	98	64.528	Eptatretus_burgeri
ENSAPEG00000011679	cpsf4	100	81.509	ENSEASG00005002487	CPSF4	100	81.509	Equus_asinus_asinus
ENSAPEG00000011679	cpsf4	100	85.185	ENSECAG00000007525	CPSF4	100	85.185	Equus_caballus
ENSAPEG00000011679	cpsf4	63	94.030	ENSEEUG00000002158	CPSF4	73	94.030	Erinaceus_europaeus
ENSAPEG00000011679	cpsf4	100	85.662	ENSELUG00000011481	cpsf4	100	85.662	Esox_lucius
ENSAPEG00000011679	cpsf4	100	85.185	ENSFCAG00000015070	CPSF4	100	85.185	Felis_catus
ENSAPEG00000011679	cpsf4	100	80.377	ENSFALG00000013799	CPSF4	100	80.377	Ficedula_albicollis
ENSAPEG00000011679	cpsf4	62	55.814	ENSFALG00000012906	-	100	55.814	Ficedula_albicollis
ENSAPEG00000011679	cpsf4	90	84.426	ENSFDAG00000014092	CPSF4	100	84.426	Fukomys_damarensis
ENSAPEG00000011679	cpsf4	100	91.321	ENSFHEG00000010880	cpsf4	100	91.321	Fundulus_heteroclitus
ENSAPEG00000011679	cpsf4	100	82.288	ENSGMOG00000002330	cpsf4	100	82.288	Gadus_morhua
ENSAPEG00000011679	cpsf4	100	80.755	ENSGALG00000004714	CPSF4	100	80.755	Gallus_gallus
ENSAPEG00000011679	cpsf4	99	37.158	ENSGALG00000004441	-	92	37.158	Gallus_gallus
ENSAPEG00000011679	cpsf4	100	90.566	ENSGAFG00000010580	cpsf4	100	90.566	Gambusia_affinis
ENSAPEG00000011679	cpsf4	100	86.940	ENSGACG00000007792	cpsf4	100	86.940	Gasterosteus_aculeatus
ENSAPEG00000011679	cpsf4	100	85.185	ENSGAGG00000021835	CPSF4	100	85.185	Gopherus_agassizii
ENSAPEG00000011679	cpsf4	69	75.275	ENSGAGG00000020579	-	100	75.275	Gopherus_agassizii
ENSAPEG00000011679	cpsf4	100	84.815	ENSGGOG00000015131	CPSF4	100	84.815	Gorilla_gorilla
ENSAPEG00000011679	cpsf4	100	93.962	ENSHBUG00000013699	cpsf4	100	93.962	Haplochromis_burtoni
ENSAPEG00000011679	cpsf4	100	84.502	ENSHGLG00000017150	CPSF4	100	84.502	Heterocephalus_glaber_female
ENSAPEG00000011679	cpsf4	87	82.203	ENSHGLG00100009215	-	100	82.203	Heterocephalus_glaber_male
ENSAPEG00000011679	cpsf4	67	64.407	ENSHGLG00100017302	-	89	65.263	Heterocephalus_glaber_male
ENSAPEG00000011679	cpsf4	100	88.722	ENSHCOG00000004397	cpsf4	100	88.722	Hippocampus_comes
ENSAPEG00000011679	cpsf4	100	83.026	ENSIPUG00000017147	cpsf4	100	84.133	Ictalurus_punctatus
ENSAPEG00000011679	cpsf4	100	85.185	ENSSTOG00000001688	CPSF4	100	85.185	Ictidomys_tridecemlineatus
ENSAPEG00000011679	cpsf4	100	84.815	ENSJJAG00000019426	Cpsf4	100	84.815	Jaculus_jaculus
ENSAPEG00000011679	cpsf4	100	91.698	ENSKMAG00000015642	cpsf4	100	91.698	Kryptolebias_marmoratus
ENSAPEG00000011679	cpsf4	100	84.871	ENSLACG00000010938	CPSF4	100	84.871	Latimeria_chalumnae
ENSAPEG00000011679	cpsf4	100	59.551	ENSLACG00000018470	-	100	59.551	Latimeria_chalumnae
ENSAPEG00000011679	cpsf4	100	82.963	ENSLOCG00000004814	cpsf4	100	84.015	Lepisosteus_oculatus
ENSAPEG00000011679	cpsf4	100	84.815	ENSLAFG00000000159	CPSF4	100	84.815	Loxodonta_africana
ENSAPEG00000011679	cpsf4	100	84.815	ENSMFAG00000001462	CPSF4	100	84.815	Macaca_fascicularis
ENSAPEG00000011679	cpsf4	100	84.815	ENSMMUG00000019191	CPSF4	100	84.815	Macaca_mulatta
ENSAPEG00000011679	cpsf4	100	84.815	ENSMNEG00000032306	CPSF4	100	84.815	Macaca_nemestrina
ENSAPEG00000011679	cpsf4	100	84.815	ENSMLEG00000034721	CPSF4	100	84.815	Mandrillus_leucophaeus
ENSAPEG00000011679	cpsf4	100	93.609	ENSMAMG00000006244	cpsf4	100	93.609	Mastacembelus_armatus
ENSAPEG00000011679	cpsf4	100	93.962	ENSMZEG00005007515	cpsf4	100	93.962	Maylandia_zebra
ENSAPEG00000011679	cpsf4	87	79.221	ENSMGAG00000004235	CPSF4	100	79.221	Meleagris_gallopavo
ENSAPEG00000011679	cpsf4	100	85.185	ENSMAUG00000021253	Cpsf4	100	85.185	Mesocricetus_auratus
ENSAPEG00000011679	cpsf4	100	84.815	ENSMICG00000017429	CPSF4	100	84.815	Microcebus_murinus
ENSAPEG00000011679	cpsf4	100	85.185	ENSMOCG00000014901	Cpsf4	100	85.185	Microtus_ochrogaster
ENSAPEG00000011679	cpsf4	100	93.233	ENSMMOG00000001813	cpsf4	100	93.233	Mola_mola
ENSAPEG00000011679	cpsf4	100	85.926	ENSMODG00000001367	CPSF4	100	85.926	Monodelphis_domestica
ENSAPEG00000011679	cpsf4	100	93.609	ENSMALG00000012611	cpsf4	100	93.609	Monopterus_albus
ENSAPEG00000011679	cpsf4	100	85.185	MGP_CAROLIEiJ_G0028012	Cpsf4	100	85.185	Mus_caroli
ENSAPEG00000011679	cpsf4	100	85.185	ENSMUSG00000029625	Cpsf4	100	85.185	Mus_musculus
ENSAPEG00000011679	cpsf4	100	85.185	MGP_PahariEiJ_G0024581	Cpsf4	100	85.185	Mus_pahari
ENSAPEG00000011679	cpsf4	100	84.815	MGP_SPRETEiJ_G0029013	Cpsf4	100	84.815	Mus_spretus
ENSAPEG00000011679	cpsf4	100	85.185	ENSMPUG00000016508	CPSF4	100	85.185	Mustela_putorius_furo
ENSAPEG00000011679	cpsf4	87	80.087	ENSMLUG00000010980	CPSF4	100	80.087	Myotis_lucifugus
ENSAPEG00000011679	cpsf4	100	85.556	ENSNGAG00000001567	Cpsf4	100	85.556	Nannospalax_galili
ENSAPEG00000011679	cpsf4	91	93.776	ENSNBRG00000003943	cpsf4	98	93.776	Neolamprologus_brichardi
ENSAPEG00000011679	cpsf4	100	82.836	ENSNLEG00000011074	CPSF4	100	82.707	Nomascus_leucogenys
ENSAPEG00000011679	cpsf4	100	85.926	ENSMEUG00000006955	CPSF4	100	85.926	Notamacropus_eugenii
ENSAPEG00000011679	cpsf4	100	84.444	ENSOPRG00000013663	CPSF4	100	84.444	Ochotona_princeps
ENSAPEG00000011679	cpsf4	98	69.349	ENSODEG00000018283	-	91	69.349	Octodon_degus
ENSAPEG00000011679	cpsf4	100	65.799	ENSODEG00000009779	-	100	65.799	Octodon_degus
ENSAPEG00000011679	cpsf4	100	85.185	ENSODEG00000011181	-	100	85.185	Octodon_degus
ENSAPEG00000011679	cpsf4	100	93.962	ENSONIG00000008495	cpsf4	100	93.962	Oreochromis_niloticus
ENSAPEG00000011679	cpsf4	87	82.773	ENSOANG00000007729	CPSF4	100	82.773	Ornithorhynchus_anatinus
ENSAPEG00000011679	cpsf4	100	53.025	ENSOANG00000009568	-	100	53.025	Ornithorhynchus_anatinus
ENSAPEG00000011679	cpsf4	100	84.444	ENSOCUG00000002437	CPSF4	70	84.444	Oryctolagus_cuniculus
ENSAPEG00000011679	cpsf4	100	92.830	ENSORLG00000022798	cpsf4	100	92.830	Oryzias_latipes
ENSAPEG00000011679	cpsf4	100	92.830	ENSORLG00020008548	cpsf4	100	92.830	Oryzias_latipes_hni
ENSAPEG00000011679	cpsf4	100	93.208	ENSORLG00015019575	cpsf4	100	93.208	Oryzias_latipes_hsok
ENSAPEG00000011679	cpsf4	100	91.698	ENSOMEG00000005176	cpsf4	100	91.698	Oryzias_melastigma
ENSAPEG00000011679	cpsf4	100	84.815	ENSOGAG00000010884	CPSF4	100	84.815	Otolemur_garnettii
ENSAPEG00000011679	cpsf4	100	74.088	ENSOARG00000018668	CPSF4	100	74.088	Ovis_aries
ENSAPEG00000011679	cpsf4	100	84.815	ENSPPAG00000043355	CPSF4	100	84.815	Pan_paniscus
ENSAPEG00000011679	cpsf4	100	85.185	ENSPPRG00000003134	CPSF4	100	85.185	Panthera_pardus
ENSAPEG00000011679	cpsf4	90	84.774	ENSPTIG00000005604	CPSF4	90	84.774	Panthera_tigris_altaica
ENSAPEG00000011679	cpsf4	100	84.815	ENSPTRG00000019453	CPSF4	100	84.815	Pan_troglodytes
ENSAPEG00000011679	cpsf4	100	84.815	ENSPANG00000023123	CPSF4	100	84.815	Papio_anubis
ENSAPEG00000011679	cpsf4	100	83.577	ENSPKIG00000014278	cpsf4	100	83.577	Paramormyrops_kingsleyae
ENSAPEG00000011679	cpsf4	81	58.411	ENSPSIG00000018198	-	100	58.411	Pelodiscus_sinensis
ENSAPEG00000011679	cpsf4	80	83.871	ENSPSIG00000011229	CPSF4	100	83.871	Pelodiscus_sinensis
ENSAPEG00000011679	cpsf4	100	78.491	ENSPMGG00000017735	cpsf4	100	78.491	Periophthalmus_magnuspinnatus
ENSAPEG00000011679	cpsf4	100	85.185	ENSPEMG00000004508	Cpsf4	100	85.185	Peromyscus_maniculatus_bairdii
ENSAPEG00000011679	cpsf4	100	85.926	ENSPCIG00000024776	CPSF4	100	85.926	Phascolarctos_cinereus
ENSAPEG00000011679	cpsf4	100	90.566	ENSPFOG00000014912	cpsf4	100	90.566	Poecilia_formosa
ENSAPEG00000011679	cpsf4	100	82.642	ENSPLAG00000009599	cpsf4	100	82.642	Poecilia_latipinna
ENSAPEG00000011679	cpsf4	100	90.566	ENSPMEG00000009790	cpsf4	100	90.566	Poecilia_mexicana
ENSAPEG00000011679	cpsf4	100	89.811	ENSPREG00000018166	cpsf4	100	89.811	Poecilia_reticulata
ENSAPEG00000011679	cpsf4	87	83.830	ENSPPYG00000017378	CPSF4	100	83.830	Pongo_abelii
ENSAPEG00000011679	cpsf4	100	84.815	ENSPCAG00000001892	CPSF4	100	84.815	Procavia_capensis
ENSAPEG00000011679	cpsf4	100	85.185	ENSPCOG00000012771	CPSF4	100	85.185	Propithecus_coquereli
ENSAPEG00000011679	cpsf4	100	80.000	ENSPVAG00000007531	CPSF4	100	80.000	Pteropus_vampyrus
ENSAPEG00000011679	cpsf4	100	93.962	ENSPNYG00000018559	cpsf4	100	93.962	Pundamilia_nyererei
ENSAPEG00000011679	cpsf4	100	85.556	ENSPNAG00000003736	cpsf4	100	85.556	Pygocentrus_nattereri
ENSAPEG00000011679	cpsf4	100	81.887	ENSRNOG00000000985	Cpsf4	100	81.887	Rattus_norvegicus
ENSAPEG00000011679	cpsf4	87	84.255	ENSRBIG00000033886	CPSF4	100	84.255	Rhinopithecus_bieti
ENSAPEG00000011679	cpsf4	100	81.132	ENSRROG00000040431	CPSF4	100	81.132	Rhinopithecus_roxellana
ENSAPEG00000011679	cpsf4	100	84.815	ENSSBOG00000020493	CPSF4	100	84.815	Saimiri_boliviensis_boliviensis
ENSAPEG00000011679	cpsf4	100	85.926	ENSSHAG00000011533	CPSF4	100	85.926	Sarcophilus_harrisii
ENSAPEG00000011679	cpsf4	100	83.333	ENSSFOG00015007883	cpsf4	100	83.333	Scleropages_formosus
ENSAPEG00000011679	cpsf4	100	83.083	ENSSMAG00000006374	cpsf4	100	83.083	Scophthalmus_maximus
ENSAPEG00000011679	cpsf4	100	95.113	ENSSDUG00000018887	cpsf4	100	95.113	Seriola_dumerili
ENSAPEG00000011679	cpsf4	100	95.113	ENSSLDG00000019078	cpsf4	100	95.113	Seriola_lalandi_dorsalis
ENSAPEG00000011679	cpsf4	87	84.255	ENSSARG00000012416	CPSF4	100	84.255	Sorex_araneus
ENSAPEG00000011679	cpsf4	100	83.333	ENSSPUG00000003549	CPSF4	100	83.333	Sphenodon_punctatus
ENSAPEG00000011679	cpsf4	96	59.449	ENSSPUG00000014803	-	97	59.449	Sphenodon_punctatus
ENSAPEG00000011679	cpsf4	100	87.170	ENSSPAG00000006174	cpsf4	100	87.170	Stegastes_partitus
ENSAPEG00000011679	cpsf4	100	81.132	ENSSSCG00000026896	CPSF4	100	81.132	Sus_scrofa
ENSAPEG00000011679	cpsf4	100	79.401	ENSTGUG00000007552	CPSF4	100	79.401	Taeniopygia_guttata
ENSAPEG00000011679	cpsf4	100	87.925	ENSTRUG00000024220	cpsf4	100	87.925	Takifugu_rubripes
ENSAPEG00000011679	cpsf4	100	89.434	ENSTNIG00000006265	cpsf4	100	89.434	Tetraodon_nigroviridis
ENSAPEG00000011679	cpsf4	87	75.319	ENSTBEG00000011406	CPSF4	100	75.319	Tupaia_belangeri
ENSAPEG00000011679	cpsf4	100	73.234	ENSTTRG00000003007	CPSF4	100	73.234	Tursiops_truncatus
ENSAPEG00000011679	cpsf4	92	80.658	ENSUAMG00000008051	CPSF4	85	80.658	Ursus_americanus
ENSAPEG00000011679	cpsf4	100	81.887	ENSUMAG00000009474	CPSF4	100	81.887	Ursus_maritimus
ENSAPEG00000011679	cpsf4	100	81.509	ENSVVUG00000008824	CPSF4	100	81.509	Vulpes_vulpes
ENSAPEG00000011679	cpsf4	100	79.570	ENSXETG00000009892	cpsf4	100	79.570	Xenopus_tropicalis
ENSAPEG00000011679	cpsf4	99	58.647	ENSXETG00000004641	cpsf4l	99	58.647	Xenopus_tropicalis
ENSAPEG00000011679	cpsf4	100	90.189	ENSXCOG00000016040	cpsf4	100	90.189	Xiphophorus_couchianus
ENSAPEG00000011679	cpsf4	100	90.566	ENSXMAG00000024670	cpsf4	100	90.566	Xiphophorus_maculatus