EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000012270 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 28934 bases
Position: chr23:21398178-21427111
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	1	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	2	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	3	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	4	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	5	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	6	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	7	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	8	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	9	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	10	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	11	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	12	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	13	14
ENSAPEP00000017259	KH_1	PF00013.29	8.3e-189	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000017749	-	7773	-	ENSAPEP00000017259	1268 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000012270	hdlbpb	100	71.797	ENSAPEG00000000522	hdlbpa	100	71.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012270	hdlbpb	100	99.211	ENSAPOG00000006904	hdlbpb	100	99.211	Acanthochromis_polyacanthus
ENSAPEG00000012270	hdlbpb	100	92.229	ENSACIG00000016154	hdlbpb	100	92.229	Amphilophus_citrinellus
ENSAPEG00000012270	hdlbpb	100	99.921	ENSAOCG00000004083	hdlbpb	100	99.921	Amphiprion_ocellaris
ENSAPEG00000012270	hdlbpb	100	97.397	ENSATEG00000019877	hdlbpb	100	97.397	Anabas_testudineus
ENSAPEG00000012270	hdlbpb	100	82.571	ENSACAG00000003606	-	100	82.571	Anolis_carolinensis
ENSAPEG00000012270	hdlbpb	100	97.871	ENSACLG00000006618	hdlbpb	100	97.871	Astatotilapia_calliptera
ENSAPEG00000012270	hdlbpb	100	78.268	ENSAMXG00000019946	hdlbpb	100	78.268	Astyanax_mexicanus
ENSAPEG00000012270	hdlbpb	100	96.609	ENSCSEG00000000955	hdlbpb	100	96.609	Cynoglossus_semilaevis
ENSAPEG00000012270	hdlbpb	100	96.136	ENSCVAG00000005345	hdlbpb	100	96.136	Cyprinodon_variegatus
ENSAPEG00000012270	hdlbpb	99	85.872	ENSDARG00000061864	hdlbpb	99	85.872	Danio_rerio
ENSAPEG00000012270	hdlbpb	92	70.256	ENSEBUG00000005304	hdlbpb	96	70.256	Eptatretus_burgeri
ENSAPEG00000012270	hdlbpb	100	78.728	ENSELUG00000019925	hdlbpb	100	78.885	Esox_lucius
ENSAPEG00000012270	hdlbpb	87	34.713	ENSFHEG00000001701	hdlbpb	100	91.246	Fundulus_heteroclitus
ENSAPEG00000012270	hdlbpb	95	88.310	ENSGMOG00000004522	hdlbpb	78	88.310	Gadus_morhua
ENSAPEG00000012270	hdlbpb	100	96.136	ENSGAFG00000005278	hdlbpb	100	96.136	Gambusia_affinis
ENSAPEG00000012270	hdlbpb	99	93.528	ENSGACG00000019361	hdlbpb	100	93.765	Gasterosteus_aculeatus
ENSAPEG00000012270	hdlbpb	100	97.713	ENSHBUG00000018434	hdlbpb	100	97.713	Haplochromis_burtoni
ENSAPEG00000012270	hdlbpb	100	85.591	ENSIPUG00000003291	HDLBP	100	85.963	Ictalurus_punctatus
ENSAPEG00000012270	hdlbpb	100	97.319	ENSKMAG00000016562	hdlbpb	100	97.319	Kryptolebias_marmoratus
ENSAPEG00000012270	hdlbpb	100	97.713	ENSLBEG00000027855	hdlbpb	100	97.713	Labrus_bergylta
ENSAPEG00000012270	hdlbpb	100	85.189	ENSLACG00000007661	hdlbpb	90	85.189	Latimeria_chalumnae
ENSAPEG00000012270	hdlbpb	100	83.452	ENSLOCG00000013909	hdlbpb	100	83.452	Lepisosteus_oculatus
ENSAPEG00000012270	hdlbpb	100	98.028	ENSMAMG00000003035	hdlbpb	100	98.028	Mastacembelus_armatus
ENSAPEG00000012270	hdlbpb	100	97.871	ENSMZEG00005021465	hdlbpb	100	97.871	Maylandia_zebra
ENSAPEG00000012270	hdlbpb	100	96.767	ENSMMOG00000012525	hdlbpb	100	96.767	Mola_mola
ENSAPEG00000012270	hdlbpb	100	95.899	ENSMALG00000008938	hdlbpb	100	95.899	Monopterus_albus
ENSAPEG00000012270	hdlbpb	100	97.950	ENSNBRG00000002236	hdlbpb	100	97.950	Neolamprologus_brichardi
ENSAPEG00000012270	hdlbpb	100	97.555	ENSONIG00000009211	hdlbpb	100	97.555	Oreochromis_niloticus
ENSAPEG00000012270	hdlbpb	100	95.662	ENSORLG00000006581	hdlbpb	100	95.662	Oryzias_latipes
ENSAPEG00000012270	hdlbpb	100	95.820	ENSORLG00020010012	hdlbpb	100	95.820	Oryzias_latipes_hni
ENSAPEG00000012270	hdlbpb	100	96.057	ENSORLG00015006863	hdlbpb	100	96.057	Oryzias_latipes_hsok
ENSAPEG00000012270	hdlbpb	100	96.057	ENSOMEG00000011131	hdlbpb	100	96.057	Oryzias_melastigma
ENSAPEG00000012270	hdlbpb	100	89.432	ENSPKIG00000005966	hdlbpb	100	89.432	Paramormyrops_kingsleyae
ENSAPEG00000012270	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSAPEG00000012270	hdlbpb	92	64.901	ENSPMAG00000000249	-	99	64.968	Petromyzon_marinus
ENSAPEG00000012270	hdlbpb	94	74.781	ENSPMAG00000002131	hdlbpb	100	74.781	Petromyzon_marinus
ENSAPEG00000012270	hdlbpb	100	95.554	ENSPFOG00000008755	hdlbpb	100	95.554	Poecilia_formosa
ENSAPEG00000012270	hdlbpb	100	96.530	ENSPLAG00000007055	hdlbpb	100	96.530	Poecilia_latipinna
ENSAPEG00000012270	hdlbpb	100	96.451	ENSPMEG00000001952	hdlbpb	100	96.451	Poecilia_mexicana
ENSAPEG00000012270	hdlbpb	100	96.609	ENSPREG00000012848	hdlbpb	100	96.609	Poecilia_reticulata
ENSAPEG00000012270	hdlbpb	100	97.713	ENSPNYG00000022467	hdlbpb	100	97.713	Pundamilia_nyererei
ENSAPEG00000012270	hdlbpb	100	88.249	ENSPNAG00000011104	hdlbpb	100	88.249	Pygocentrus_nattereri
ENSAPEG00000012270	hdlbpb	100	88.565	ENSSFOG00015023199	hdlbpb	100	88.565	Scleropages_formosus
ENSAPEG00000012270	hdlbpb	100	97.555	ENSSMAG00000008790	hdlbpb	100	97.555	Scophthalmus_maximus
ENSAPEG00000012270	hdlbpb	100	98.817	ENSSDUG00000020694	hdlbpb	100	98.817	Seriola_dumerili
ENSAPEG00000012270	hdlbpb	100	98.265	ENSSLDG00000020807	hdlbpb	100	98.265	Seriola_lalandi_dorsalis
ENSAPEG00000012270	hdlbpb	100	83.123	ENSSPUG00000018688	-	100	83.123	Sphenodon_punctatus
ENSAPEG00000012270	hdlbpb	100	99.448	ENSSPAG00000016969	hdlbpb	100	99.448	Stegastes_partitus
ENSAPEG00000012270	hdlbpb	98	93.349	ENSTRUG00000012888	hdlbpb	99	93.349	Takifugu_rubripes
ENSAPEG00000012270	hdlbpb	99	94.597	ENSTNIG00000002555	hdlbpb	100	94.597	Tetraodon_nigroviridis
ENSAPEG00000012270	hdlbpb	100	84.229	ENSXCOG00000001797	hdlbpb	100	68.722	Xiphophorus_couchianus
ENSAPEG00000012270	hdlbpb	100	95.741	ENSXMAG00000015633	hdlbpb	100	95.741	Xiphophorus_maculatus