EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000012300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8819 bases
Position: chr13:25374538-25383356
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000017173	zf-C2H2	PF00096.26	4.4e-22	1	3
ENSAPEP00000017173	zf-C2H2	PF00096.26	4.4e-22	2	3
ENSAPEP00000017173	zf-C2H2	PF00096.26	4.4e-22	3	3
ENSAPEP00000017173	zf-met	PF12874.7	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000017661	-	2851	-	ENSAPEP00000017173	428 (aa)	-	UPI000C30741D

Gene Model

Click here to download ENSAPEG00000012300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000012300	-	54	49.558	ENSAPEG00000015337	-	98	45.133
ENSAPEG00000012300	-	51	49.524	ENSAPEG00000018332	-	69	49.524
ENSAPEG00000012300	-	50	47.872	ENSAPEG00000012963	-	84	47.872
ENSAPEG00000012300	-	51	49.524	ENSAPEG00000018316	-	69	49.524
ENSAPEG00000012300	-	97	44.037	ENSAPEG00000016462	-	92	44.037
ENSAPEG00000012300	-	50	45.133	ENSAPEG00000013088	-	85	45.133
ENSAPEG00000012300	-	57	42.478	ENSAPEG00000002661	-	95	42.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012300	-	100	94.159	ENSAPOG00000008360	-	100	94.159	Acanthochromis_polyacanthus
ENSAPEG00000012300	-	100	100.000	ENSAOCG00000010567	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000012300	-	99	63.953	ENSCVAG00000021152	-	99	63.953	Cyprinodon_variegatus
ENSAPEG00000012300	-	97	46.018	ENSELUG00000004677	-	99	46.018	Esox_lucius
ENSAPEG00000012300	-	100	63.279	ENSFHEG00000014608	-	100	63.279	Fundulus_heteroclitus
ENSAPEG00000012300	-	56	55.556	ENSHCOG00000013256	-	88	55.556	Hippocampus_comes
ENSAPEG00000012300	-	100	71.462	ENSKMAG00000012097	-	100	71.462	Kryptolebias_marmoratus
ENSAPEG00000012300	-	67	38.043	ENSLBEG00000009663	-	88	38.043	Labrus_bergylta
ENSAPEG00000012300	-	96	52.239	ENSOMEG00000019811	-	95	52.239	Oryzias_melastigma
ENSAPEG00000012300	-	98	45.133	ENSPNAG00000025882	-	99	45.133	Pygocentrus_nattereri
ENSAPEG00000012300	-	58	50.685	ENSSMAG00000013663	-	92	47.561	Scophthalmus_maximus
ENSAPEG00000012300	-	60	52.703	ENSSPAG00000008950	-	69	52.703	Stegastes_partitus
ENSAPEG00000012300	-	100	89.977	ENSSPAG00000018010	-	100	89.977	Stegastes_partitus