EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000012435 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 13651 bases
Position: chr15:8002371-8016021
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000017366	RNase_T	PF00929.24	7.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000017862	-	1768	-	ENSAPEP00000017366	270 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012435's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012435	smfn	71	80.311	ENSG00000076043	REXO2	96	80.110	Homo_sapiens
ENSAPEG00000012435	smfn	71	80.311	ENSAMEG00000013263	REXO2	81	80.311	Ailuropoda_melanoleuca
ENSAPEG00000012435	smfn	68	90.761	ENSACIG00000023553	smfn	99	90.761	Amphilophus_citrinellus
ENSAPEG00000012435	smfn	50	98.507	ENSAOCG00000011565	smfn	82	98.507	Amphiprion_ocellaris
ENSAPEG00000012435	smfn	98	74.444	ENSATEG00000015385	smfn	97	74.444	Anabas_testudineus
ENSAPEG00000012435	smfn	69	77.540	ENSAPLG00000005045	REXO2	91	77.540	Anas_platyrhynchos
ENSAPEG00000012435	smfn	68	72.131	ENSACAG00000011631	REXO2	98	65.865	Anolis_carolinensis
ENSAPEG00000012435	smfn	71	80.829	ENSANAG00000020834	REXO2	81	80.829	Aotus_nancymaae
ENSAPEG00000012435	smfn	90	74.206	ENSACLG00000024566	smfn	95	91.160	Astatotilapia_calliptera
ENSAPEG00000012435	smfn	71	80.311	ENSBTAG00000005843	REXO2	81	80.311	Bos_taurus
ENSAPEG00000012435	smfn	67	48.066	WBGene00007429	C08B6.8	93	54.795	Caenorhabditis_elegans
ENSAPEG00000012435	smfn	71	80.311	ENSCJAG00000012434	REXO2	81	80.311	Callithrix_jacchus
ENSAPEG00000012435	smfn	71	79.275	ENSCAFG00000013511	REXO2	81	79.275	Canis_familiaris
ENSAPEG00000012435	smfn	71	80.311	ENSCAFG00020002513	REXO2	81	80.311	Canis_lupus_dingo
ENSAPEG00000012435	smfn	71	80.311	ENSCHIG00000009264	REXO2	81	80.311	Capra_hircus
ENSAPEG00000012435	smfn	70	69.681	ENSTSYG00000027948	-	96	69.681	Carlito_syrichta
ENSAPEG00000012435	smfn	71	80.311	ENSTSYG00000002237	REXO2	81	80.311	Carlito_syrichta
ENSAPEG00000012435	smfn	67	80.663	ENSCAPG00000006093	REXO2	96	80.663	Cavia_aperea
ENSAPEG00000012435	smfn	74	78.894	ENSCPOG00000010548	REXO2	84	78.894	Cavia_porcellus
ENSAPEG00000012435	smfn	71	80.829	ENSCCAG00000034979	REXO2	81	80.829	Cebus_capucinus
ENSAPEG00000012435	smfn	71	80.311	ENSCATG00000015278	REXO2	81	80.311	Cercocebus_atys
ENSAPEG00000012435	smfn	75	77.833	ENSCLAG00000011195	REXO2	86	77.833	Chinchilla_lanigera
ENSAPEG00000012435	smfn	71	80.311	ENSCSAG00000002754	REXO2	81	80.311	Chlorocebus_sabaeus
ENSAPEG00000012435	smfn	71	78.756	ENSCHOG00000000642	-	81	78.756	Choloepus_hoffmanni
ENSAPEG00000012435	smfn	51	73.188	ENSCPBG00000009359	REXO2	95	73.188	Chrysemys_picta_bellii
ENSAPEG00000012435	smfn	69	59.788	ENSCING00000009858	-	91	59.788	Ciona_intestinalis
ENSAPEG00000012435	smfn	71	80.311	ENSCANG00000034756	REXO2	81	80.311	Colobus_angolensis_palliatus
ENSAPEG00000012435	smfn	76	76.585	ENSCGRG00001019814	-	86	76.585	Cricetulus_griseus_chok1gshd
ENSAPEG00000012435	smfn	71	79.275	ENSCGRG00001013673	-	94	79.275	Cricetulus_griseus_chok1gshd
ENSAPEG00000012435	smfn	71	77.720	ENSCGRG00001010922	-	94	77.720	Cricetulus_griseus_chok1gshd
ENSAPEG00000012435	smfn	76	76.585	ENSCGRG00000006235	Rexo2	86	76.585	Cricetulus_griseus_crigri
ENSAPEG00000012435	smfn	70	87.302	ENSCSEG00000007214	smfn	97	67.897	Cynoglossus_semilaevis
ENSAPEG00000012435	smfn	67	86.667	ENSCVAG00000012008	smfn	97	86.667	Cyprinodon_variegatus
ENSAPEG00000012435	smfn	86	72.034	ENSDARG00000009806	smfn	89	72.034	Danio_rerio
ENSAPEG00000012435	smfn	64	81.977	ENSDNOG00000046533	REXO2	82	81.977	Dasypus_novemcinctus
ENSAPEG00000012435	smfn	69	62.567	ENSDORG00000025142	-	84	61.140	Dipodomys_ordii
ENSAPEG00000012435	smfn	71	80.829	ENSDORG00000011255	Rexo2	81	80.829	Dipodomys_ordii
ENSAPEG00000012435	smfn	67	53.297	FBgn0039115	CG10214	86	53.297	Drosophila_melanogaster
ENSAPEG00000012435	smfn	66	75.978	ENSEBUG00000013964	REXO2	61	75.978	Eptatretus_burgeri
ENSAPEG00000012435	smfn	71	80.311	ENSEASG00005006674	REXO2	81	80.311	Equus_asinus_asinus
ENSAPEG00000012435	smfn	71	80.311	ENSECAG00000005988	REXO2	81	80.311	Equus_caballus
ENSAPEG00000012435	smfn	74	81.592	ENSELUG00000020072	smfn	70	81.592	Esox_lucius
ENSAPEG00000012435	smfn	85	71.304	ENSFCAG00000018632	REXO2	95	71.304	Felis_catus
ENSAPEG00000012435	smfn	67	78.571	ENSFALG00000010044	REXO2	90	78.571	Ficedula_albicollis
ENSAPEG00000012435	smfn	74	78.894	ENSFDAG00000011764	REXO2	84	78.894	Fukomys_damarensis
ENSAPEG00000012435	smfn	69	85.405	ENSGMOG00000006370	smfn	96	85.405	Gadus_morhua
ENSAPEG00000012435	smfn	70	79.474	ENSGALG00000035980	REXO2	88	75.243	Gallus_gallus
ENSAPEG00000012435	smfn	76	85.437	ENSGAFG00000015349	smfn	74	85.437	Gambusia_affinis
ENSAPEG00000012435	smfn	72	87.692	ENSGACG00000020096	smfn	96	87.692	Gasterosteus_aculeatus
ENSAPEG00000012435	smfn	74	76.884	ENSGAGG00000021126	REXO2	87	76.884	Gopherus_agassizii
ENSAPEG00000012435	smfn	71	80.311	ENSGGOG00000023267	REXO2	81	80.311	Gorilla_gorilla
ENSAPEG00000012435	smfn	88	56.452	ENSHBUG00000020097	REXO2	99	56.452	Haplochromis_burtoni
ENSAPEG00000012435	smfn	74	78.392	ENSHGLG00000013556	REXO2	84	78.392	Heterocephalus_glaber_female
ENSAPEG00000012435	smfn	74	78.894	ENSHGLG00100005257	REXO2	84	78.894	Heterocephalus_glaber_male
ENSAPEG00000012435	smfn	67	81.667	ENSHCOG00000007122	smfn	98	81.667	Hippocampus_comes
ENSAPEG00000012435	smfn	71	87.047	ENSIPUG00000020440	rexo2	80	77.974	Ictalurus_punctatus
ENSAPEG00000012435	smfn	71	80.829	ENSSTOG00000012465	REXO2	81	80.829	Ictidomys_tridecemlineatus
ENSAPEG00000012435	smfn	73	56.853	ENSJJAG00000022605	-	79	56.853	Jaculus_jaculus
ENSAPEG00000012435	smfn	85	71.739	ENSJJAG00000013710	-	95	71.739	Jaculus_jaculus
ENSAPEG00000012435	smfn	99	67.857	ENSKMAG00000016795	smfn	99	68.705	Kryptolebias_marmoratus
ENSAPEG00000012435	smfn	67	87.912	ENSLBEG00000006021	smfn	96	87.912	Labrus_bergylta
ENSAPEG00000012435	smfn	76	67.773	ENSLACG00000018623	REXO2	86	67.773	Latimeria_chalumnae
ENSAPEG00000012435	smfn	73	82.741	ENSLOCG00000002389	smfn	94	82.741	Lepisosteus_oculatus
ENSAPEG00000012435	smfn	71	80.829	ENSLAFG00000012451	REXO2	81	80.829	Loxodonta_africana
ENSAPEG00000012435	smfn	71	80.311	ENSMFAG00000041155	REXO2	81	80.311	Macaca_fascicularis
ENSAPEG00000012435	smfn	71	80.311	ENSMMUG00000012269	REXO2	81	80.311	Macaca_mulatta
ENSAPEG00000012435	smfn	71	80.311	ENSMNEG00000033379	REXO2	81	80.311	Macaca_nemestrina
ENSAPEG00000012435	smfn	71	80.311	ENSMLEG00000036571	REXO2	81	80.311	Mandrillus_leucophaeus
ENSAPEG00000012435	smfn	99	74.725	ENSMAMG00000021209	smfn	99	74.725	Mastacembelus_armatus
ENSAPEG00000012435	smfn	90	74.206	ENSMZEG00005020730	REXO2	97	74.206	Maylandia_zebra
ENSAPEG00000012435	smfn	90	74.206	ENSMZEG00005023224	-	97	74.206	Maylandia_zebra
ENSAPEG00000012435	smfn	57	76.923	ENSMGAG00000003026	REXO2	96	76.923	Meleagris_gallopavo
ENSAPEG00000012435	smfn	76	76.585	ENSMAUG00000014576	Rexo2	86	76.585	Mesocricetus_auratus
ENSAPEG00000012435	smfn	84	72.052	ENSMICG00000010094	REXO2	81	80.829	Microcebus_murinus
ENSAPEG00000012435	smfn	71	80.311	ENSMOCG00000009016	Rexo2	81	80.311	Microtus_ochrogaster
ENSAPEG00000012435	smfn	94	72.587	ENSMMOG00000006430	smfn	94	72.587	Mola_mola
ENSAPEG00000012435	smfn	71	82.383	ENSMODG00000013913	REXO2	82	82.383	Monodelphis_domestica
ENSAPEG00000012435	smfn	97	70.182	ENSMALG00000018130	smfn	79	70.182	Monopterus_albus
ENSAPEG00000012435	smfn	71	79.275	MGP_CAROLIEiJ_G0032166	Rexo2	81	79.275	Mus_caroli
ENSAPEG00000012435	smfn	71	79.275	ENSMUSG00000032026	Rexo2	81	79.275	Mus_musculus
ENSAPEG00000012435	smfn	71	79.275	MGP_PahariEiJ_G0015034	Rexo2	81	79.275	Mus_pahari
ENSAPEG00000012435	smfn	71	79.275	MGP_SPRETEiJ_G0033305	Rexo2	81	79.275	Mus_spretus
ENSAPEG00000012435	smfn	71	80.311	ENSMPUG00000003947	REXO2	81	80.311	Mustela_putorius_furo
ENSAPEG00000012435	smfn	84	71.616	ENSMLUG00000009030	REXO2	94	71.616	Myotis_lucifugus
ENSAPEG00000012435	smfn	71	80.311	ENSNGAG00000008819	Rexo2	94	80.311	Nannospalax_galili
ENSAPEG00000012435	smfn	68	89.674	ENSNBRG00000006529	smfn	97	89.674	Neolamprologus_brichardi
ENSAPEG00000012435	smfn	71	80.311	ENSNLEG00000029745	REXO2	81	80.311	Nomascus_leucogenys
ENSAPEG00000012435	smfn	71	81.865	ENSMEUG00000011558	REXO2	89	81.865	Notamacropus_eugenii
ENSAPEG00000012435	smfn	75	53.922	ENSOPRG00000011076	REXO2	93	51.101	Ochotona_princeps
ENSAPEG00000012435	smfn	67	80.663	ENSODEG00000009750	-	96	80.663	Octodon_degus
ENSAPEG00000012435	smfn	68	62.295	ENSODEG00000016046	-	92	62.295	Octodon_degus
ENSAPEG00000012435	smfn	78	87.678	ENSONIG00000001954	smfn	90	87.678	Oreochromis_niloticus
ENSAPEG00000012435	smfn	71	79.793	ENSOANG00000001754	REXO2	85	76.355	Ornithorhynchus_anatinus
ENSAPEG00000012435	smfn	71	80.829	ENSOCUG00000004274	REXO2	90	71.739	Oryctolagus_cuniculus
ENSAPEG00000012435	smfn	96	69.349	ENSORLG00000005119	smfn	85	69.349	Oryzias_latipes
ENSAPEG00000012435	smfn	96	69.732	ENSORLG00020010121	smfn	85	69.732	Oryzias_latipes_hni
ENSAPEG00000012435	smfn	96	69.962	ENSORLG00015015699	smfn	85	69.962	Oryzias_latipes_hsok
ENSAPEG00000012435	smfn	75	81.683	ENSOMEG00000016878	REXO2	74	81.683	Oryzias_melastigma
ENSAPEG00000012435	smfn	51	79.710	ENSOMEG00000008940	-	97	79.710	Oryzias_melastigma
ENSAPEG00000012435	smfn	85	71.739	ENSOGAG00000016860	REXO2	95	71.739	Otolemur_garnettii
ENSAPEG00000012435	smfn	71	80.311	ENSOARG00000001040	REXO2	91	80.311	Ovis_aries
ENSAPEG00000012435	smfn	71	80.311	ENSPPAG00000039849	REXO2	81	80.311	Pan_paniscus
ENSAPEG00000012435	smfn	85	71.304	ENSPPRG00000007255	REXO2	95	71.304	Panthera_pardus
ENSAPEG00000012435	smfn	67	80.110	ENSPTIG00000015578	REXO2	96	80.110	Panthera_tigris_altaica
ENSAPEG00000012435	smfn	71	80.311	ENSPTRG00000004306	REXO2	81	80.311	Pan_troglodytes
ENSAPEG00000012435	smfn	71	80.311	ENSPANG00000010675	REXO2	81	80.311	Papio_anubis
ENSAPEG00000012435	smfn	71	84.375	ENSPKIG00000000911	smfn	77	85.811	Paramormyrops_kingsleyae
ENSAPEG00000012435	smfn	71	80.829	ENSPSIG00000005151	REXO2	72	79.695	Pelodiscus_sinensis
ENSAPEG00000012435	smfn	67	84.615	ENSPMGG00000007442	smfn	97	84.615	Periophthalmus_magnuspinnatus
ENSAPEG00000012435	smfn	71	65.285	ENSPEMG00000001421	Rexo2	80	64.767	Peromyscus_maniculatus_bairdii
ENSAPEG00000012435	smfn	71	82.383	ENSPCIG00000011227	REXO2	66	68.000	Phascolarctos_cinereus
ENSAPEG00000012435	smfn	99	68.459	ENSPFOG00000017861	smfn	99	87.065	Poecilia_formosa
ENSAPEG00000012435	smfn	68	81.967	ENSPLAG00000007327	REXO2	69	81.967	Poecilia_latipinna
ENSAPEG00000012435	smfn	99	68.817	ENSPMEG00000017343	smfn	99	68.817	Poecilia_mexicana
ENSAPEG00000012435	smfn	99	67.742	ENSPREG00000016438	smfn	99	67.742	Poecilia_reticulata
ENSAPEG00000012435	smfn	71	80.311	ENSPPYG00000003895	REXO2	81	80.311	Pongo_abelii
ENSAPEG00000012435	smfn	71	79.793	ENSPCAG00000005237	REXO2	81	79.793	Procavia_capensis
ENSAPEG00000012435	smfn	59	82.278	ENSPCOG00000027639	REXO2	81	82.278	Propithecus_coquereli
ENSAPEG00000012435	smfn	84	61.039	ENSPVAG00000005295	REXO2	94	61.039	Pteropus_vampyrus
ENSAPEG00000012435	smfn	90	73.810	ENSPNYG00000018401	smfn	97	73.810	Pundamilia_nyererei
ENSAPEG00000012435	smfn	71	85.417	ENSPNAG00000005290	smfn	89	72.917	Pygocentrus_nattereri
ENSAPEG00000012435	smfn	71	79.275	ENSRNOG00000018939	Rexo2	81	79.275	Rattus_norvegicus
ENSAPEG00000012435	smfn	71	80.311	ENSRBIG00000037809	REXO2	81	80.311	Rhinopithecus_bieti
ENSAPEG00000012435	smfn	71	80.311	ENSRROG00000038928	REXO2	81	80.311	Rhinopithecus_roxellana
ENSAPEG00000012435	smfn	81	39.823	YLR059C	REX2	80	39.823	Saccharomyces_cerevisiae
ENSAPEG00000012435	smfn	71	80.829	ENSSBOG00000028651	REXO2	81	80.829	Saimiri_boliviensis_boliviensis
ENSAPEG00000012435	smfn	71	82.383	ENSSHAG00000008008	REXO2	82	82.383	Sarcophilus_harrisii
ENSAPEG00000012435	smfn	69	82.258	ENSSFOG00015022414	smfn	99	82.258	Scleropages_formosus
ENSAPEG00000012435	smfn	99	71.168	ENSSMAG00000003168	smfn	99	71.168	Scophthalmus_maximus
ENSAPEG00000012435	smfn	99	74.733	ENSSDUG00000015624	smfn	99	74.733	Seriola_dumerili
ENSAPEG00000012435	smfn	99	74.021	ENSSLDG00000014005	smfn	99	74.021	Seriola_lalandi_dorsalis
ENSAPEG00000012435	smfn	58	71.975	ENSSPUG00000006005	REXO2	84	71.975	Sphenodon_punctatus
ENSAPEG00000012435	smfn	69	95.161	ENSSPAG00000001530	smfn	100	95.161	Stegastes_partitus
ENSAPEG00000012435	smfn	71	80.311	ENSSSCG00000015056	REXO2	81	80.311	Sus_scrofa
ENSAPEG00000012435	smfn	71	78.646	ENSTGUG00000000121	REXO2	87	75.490	Taeniopygia_guttata
ENSAPEG00000012435	smfn	72	84.694	ENSTRUG00000021529	smfn	76	83.173	Takifugu_rubripes
ENSAPEG00000012435	smfn	70	86.316	ENSTNIG00000008588	smfn	86	86.082	Tetraodon_nigroviridis
ENSAPEG00000012435	smfn	85	71.739	ENSTBEG00000017040	REXO2	95	71.739	Tupaia_belangeri
ENSAPEG00000012435	smfn	71	80.311	ENSTTRG00000014928	REXO2	81	80.311	Tursiops_truncatus
ENSAPEG00000012435	smfn	71	74.611	ENSUAMG00000019096	REXO2	81	81.646	Ursus_americanus
ENSAPEG00000012435	smfn	71	80.311	ENSUMAG00000003770	REXO2	81	80.311	Ursus_maritimus
ENSAPEG00000012435	smfn	67	61.878	ENSVPAG00000006301	REXO2	96	61.878	Vicugna_pacos
ENSAPEG00000012435	smfn	77	75.814	ENSVVUG00000025223	REXO2	88	76.923	Vulpes_vulpes
ENSAPEG00000012435	smfn	75	79.902	ENSXETG00000012648	rexo2	83	79.902	Xenopus_tropicalis
ENSAPEG00000012435	smfn	69	85.405	ENSXCOG00000018838	smfn	94	85.405	Xiphophorus_couchianus
ENSAPEG00000012435	smfn	99	66.065	ENSXMAG00000021125	smfn	88	66.065	Xiphophorus_maculatus