EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000012554 (Gene tree)
Gene ID: -
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 11383 bases
Position: chr5:19673554-19684936
Accession: ZDB-GENE-081105-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000017644	ResIII	PF04851.15	1e-26	1	2
ENSAPEP00000017644	ResIII	PF04851.15	1e-26	2	2
ENSAPEP00000017644	DEAD	PF00270.29	3.2e-54	1	2
ENSAPEP00000017644	DEAD	PF00270.29	3.2e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018140	-	5583	-	ENSAPEP00000017644	1860 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000012554	snrnp200	81	48.708	ENSAPEG00000006181	ascc3	73	48.708
ENSAPEG00000012554	snrnp200	72	32.000	ENSAPEG00000014316	hfm1	86	32.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012554	snrnp200	100	90.096	ENSG00000144028	SNRNP200	97	90.096	Homo_sapiens
ENSAPEG00000012554	snrnp200	100	98.928	ENSAPOG00000010223	snrnp200	97	98.928	Acanthochromis_polyacanthus
ENSAPEG00000012554	snrnp200	100	90.150	ENSAMEG00000008996	SNRNP200	97	90.150	Ailuropoda_melanoleuca
ENSAPEG00000012554	snrnp200	100	97.213	ENSACIG00000001764	snrnp200	98	97.213	Amphilophus_citrinellus
ENSAPEG00000012554	snrnp200	100	99.892	ENSAOCG00000024593	snrnp200	100	99.892	Amphiprion_ocellaris
ENSAPEG00000012554	snrnp200	100	98.017	ENSATEG00000022522	snrnp200	97	98.017	Anabas_testudineus
ENSAPEG00000012554	snrnp200	100	90.203	ENSAPLG00000004313	SNRNP200	98	90.203	Anas_platyrhynchos
ENSAPEG00000012554	snrnp200	99	89.142	ENSACAG00000000434	SNRNP200	97	89.142	Anolis_carolinensis
ENSAPEG00000012554	snrnp200	100	86.919	ENSANAG00000036625	SNRNP200	97	86.919	Aotus_nancymaae
ENSAPEG00000012554	snrnp200	100	97.160	ENSACLG00000011188	snrnp200	97	97.160	Astatotilapia_calliptera
ENSAPEG00000012554	snrnp200	99	93.834	ENSAMXG00000005684	snrnp200	97	93.783	Astyanax_mexicanus
ENSAPEG00000012554	snrnp200	100	89.882	ENSBTAG00000000848	SNRNP200	97	89.882	Bos_taurus
ENSAPEG00000012554	snrnp200	100	90.043	ENSCJAG00000007514	SNRNP200	97	90.043	Callithrix_jacchus
ENSAPEG00000012554	snrnp200	100	89.227	ENSCAFG00020019979	SNRNP200	99	91.912	Canis_lupus_dingo
ENSAPEG00000012554	snrnp200	100	89.882	ENSCHIG00000020611	SNRNP200	97	89.882	Capra_hircus
ENSAPEG00000012554	snrnp200	100	90.150	ENSTSYG00000010467	SNRNP200	97	90.150	Carlito_syrichta
ENSAPEG00000012554	snrnp200	100	89.696	ENSCAPG00000017234	SNRNP200	98	89.696	Cavia_aperea
ENSAPEG00000012554	snrnp200	100	89.936	ENSCPOG00000006776	SNRNP200	97	89.936	Cavia_porcellus
ENSAPEG00000012554	snrnp200	100	90.043	ENSCCAG00000033962	SNRNP200	97	90.043	Cebus_capucinus
ENSAPEG00000012554	snrnp200	100	90.096	ENSCATG00000015790	SNRNP200	97	90.096	Cercocebus_atys
ENSAPEG00000012554	snrnp200	100	89.936	ENSCLAG00000004116	SNRNP200	97	89.936	Chinchilla_lanigera
ENSAPEG00000012554	snrnp200	100	90.096	ENSCSAG00000017369	SNRNP200	97	90.096	Chlorocebus_sabaeus
ENSAPEG00000012554	snrnp200	75	92.105	ENSCHOG00000012981	-	55	92.105	Choloepus_hoffmanni
ENSAPEG00000012554	snrnp200	100	89.952	ENSCPBG00000022571	SNRNP200	97	89.952	Chrysemys_picta_bellii
ENSAPEG00000012554	snrnp200	100	75.400	ENSCING00000005082	-	97	75.560	Ciona_intestinalis
ENSAPEG00000012554	snrnp200	96	90.006	ENSCANG00000033932	SNRNP200	99	89.955	Colobus_angolensis_palliatus
ENSAPEG00000012554	snrnp200	100	90.096	ENSCGRG00001022610	Snrnp200	97	90.096	Cricetulus_griseus_chok1gshd
ENSAPEG00000012554	snrnp200	100	89.524	ENSCGRG00000016472	Snrnp200	97	89.524	Cricetulus_griseus_crigri
ENSAPEG00000012554	snrnp200	100	95.659	ENSCSEG00000016399	snrnp200	97	95.659	Cynoglossus_semilaevis
ENSAPEG00000012554	snrnp200	100	90.997	ENSCVAG00000017631	snrnp200	97	90.997	Cyprinodon_variegatus
ENSAPEG00000012554	snrnp200	100	93.998	ENSDARG00000077536	snrnp200	97	93.998	Danio_rerio
ENSAPEG00000012554	snrnp200	100	88.544	ENSDNOG00000011227	SNRNP200	97	88.544	Dasypus_novemcinctus
ENSAPEG00000012554	snrnp200	100	87.286	ENSDORG00000005861	Snrnp200	97	87.286	Dipodomys_ordii
ENSAPEG00000012554	snrnp200	100	72.737	FBgn0263599	l(3)72Ab	97	72.843	Drosophila_melanogaster
ENSAPEG00000012554	snrnp200	94	95.673	ENSETEG00000000162	SNRNP200	66	95.673	Echinops_telfairi
ENSAPEG00000012554	snrnp200	84	81.093	ENSEBUG00000016524	snrnp200	95	81.093	Eptatretus_burgeri
ENSAPEG00000012554	snrnp200	100	88.918	ENSEASG00005001884	SNRNP200	97	88.812	Equus_asinus_asinus
ENSAPEG00000012554	snrnp200	100	90.096	ENSECAG00000019675	SNRNP200	97	90.096	Equus_caballus
ENSAPEG00000012554	snrnp200	91	88.759	ENSEEUG00000012178	SNRNP200	89	88.726	Erinaceus_europaeus
ENSAPEG00000012554	snrnp200	100	95.715	ENSELUG00000018948	snrnp200	97	95.715	Esox_lucius
ENSAPEG00000012554	snrnp200	100	90.150	ENSFCAG00000010699	SNRNP200	97	90.150	Felis_catus
ENSAPEG00000012554	snrnp200	94	84.754	ENSFALG00000001368	-	93	84.754	Ficedula_albicollis
ENSAPEG00000012554	snrnp200	100	89.882	ENSFDAG00000004683	SNRNP200	97	89.882	Fukomys_damarensis
ENSAPEG00000012554	snrnp200	100	93.998	ENSFHEG00000003786	snrnp200	97	93.998	Fundulus_heteroclitus
ENSAPEG00000012554	snrnp200	100	94.644	ENSGMOG00000004881	snrnp200	97	94.483	Gadus_morhua
ENSAPEG00000012554	snrnp200	100	94.212	ENSGAFG00000010807	snrnp200	97	94.212	Gambusia_affinis
ENSAPEG00000012554	snrnp200	100	97.218	ENSGACG00000011474	snrnp200	97	97.218	Gasterosteus_aculeatus
ENSAPEG00000012554	snrnp200	92	94.306	ENSGAGG00000016069	SNRNP200	97	90.278	Gopherus_agassizii
ENSAPEG00000012554	snrnp200	100	90.096	ENSGGOG00000005174	SNRNP200	97	92.560	Gorilla_gorilla
ENSAPEG00000012554	snrnp200	100	94.498	ENSHBUG00000011322	snrnp200	99	94.498	Haplochromis_burtoni
ENSAPEG00000012554	snrnp200	100	89.936	ENSHGLG00000006654	SNRNP200	97	89.936	Heterocephalus_glaber_female
ENSAPEG00000012554	snrnp200	100	89.936	ENSHGLG00100018594	SNRNP200	97	89.936	Heterocephalus_glaber_male
ENSAPEG00000012554	snrnp200	100	90.150	ENSSTOG00000016351	SNRNP200	97	90.150	Ictidomys_tridecemlineatus
ENSAPEG00000012554	snrnp200	100	89.936	ENSJJAG00000023659	Snrnp200	97	89.936	Jaculus_jaculus
ENSAPEG00000012554	snrnp200	100	93.486	ENSKMAG00000003665	snrnp200	97	93.486	Kryptolebias_marmoratus
ENSAPEG00000012554	snrnp200	100	97.428	ENSLBEG00000021585	snrnp200	97	97.428	Labrus_bergylta
ENSAPEG00000012554	snrnp200	82	92.328	ENSLACG00000000226	SNRNP200	99	92.328	Latimeria_chalumnae
ENSAPEG00000012554	snrnp200	100	93.308	ENSLOCG00000015198	snrnp200	97	93.308	Lepisosteus_oculatus
ENSAPEG00000012554	snrnp200	100	89.829	ENSLAFG00000015626	SNRNP200	97	89.829	Loxodonta_africana
ENSAPEG00000012554	snrnp200	100	90.043	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSAPEG00000012554	snrnp200	100	90.043	ENSMMUG00000023261	SNRNP200	97	90.043	Macaca_mulatta
ENSAPEG00000012554	snrnp200	100	89.989	ENSMNEG00000032398	SNRNP200	97	89.989	Macaca_nemestrina
ENSAPEG00000012554	snrnp200	100	90.096	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSAPEG00000012554	snrnp200	100	96.786	ENSMAMG00000007851	snrnp200	97	96.786	Mastacembelus_armatus
ENSAPEG00000012554	snrnp200	100	94.498	ENSMZEG00005010787	snrnp200	99	94.498	Maylandia_zebra
ENSAPEG00000012554	snrnp200	99	89.946	ENSMGAG00000001831	SNRNP200	99	89.951	Meleagris_gallopavo
ENSAPEG00000012554	snrnp200	100	90.150	ENSMAUG00000011825	Snrnp200	97	90.150	Mesocricetus_auratus
ENSAPEG00000012554	snrnp200	100	90.150	ENSMICG00000004710	SNRNP200	98	91.831	Microcebus_murinus
ENSAPEG00000012554	snrnp200	100	88.614	ENSMOCG00000011814	Snrnp200	97	88.614	Microtus_ochrogaster
ENSAPEG00000012554	snrnp200	100	95.123	ENSMMOG00000014167	snrnp200	97	95.123	Mola_mola
ENSAPEG00000012554	snrnp200	100	90.096	ENSMODG00000008475	SNRNP200	97	90.096	Monodelphis_domestica
ENSAPEG00000012554	snrnp200	100	96.999	ENSMALG00000001973	snrnp200	97	96.999	Monopterus_albus
ENSAPEG00000012554	snrnp200	100	89.989	MGP_CAROLIEiJ_G0024250	Snrnp200	97	89.989	Mus_caroli
ENSAPEG00000012554	snrnp200	100	90.043	ENSMUSG00000003660	Snrnp200	97	90.043	Mus_musculus
ENSAPEG00000012554	snrnp200	100	90.043	MGP_PahariEiJ_G0025695	Snrnp200	97	90.043	Mus_pahari
ENSAPEG00000012554	snrnp200	95	95.862	MGP_SPRETEiJ_G0025170	Snrnp200	96	95.862	Mus_spretus
ENSAPEG00000012554	snrnp200	100	90.096	ENSMPUG00000008949	SNRNP200	97	90.096	Mustela_putorius_furo
ENSAPEG00000012554	snrnp200	100	86.884	ENSMLUG00000027511	-	97	86.884	Myotis_lucifugus
ENSAPEG00000012554	snrnp200	100	89.524	ENSMLUG00000010493	SNRNP200	97	89.524	Myotis_lucifugus
ENSAPEG00000012554	snrnp200	100	90.096	ENSNGAG00000021993	Snrnp200	97	90.096	Nannospalax_galili
ENSAPEG00000012554	snrnp200	92	97.040	ENSNBRG00000017960	snrnp200	98	97.040	Neolamprologus_brichardi
ENSAPEG00000012554	snrnp200	100	85.289	ENSNLEG00000000025	SNRNP200	97	85.343	Nomascus_leucogenys
ENSAPEG00000012554	snrnp200	99	88.552	ENSMEUG00000010532	SNRNP200	71	88.552	Notamacropus_eugenii
ENSAPEG00000012554	snrnp200	98	89.064	ENSOPRG00000015464	SNRNP200	96	89.028	Ochotona_princeps
ENSAPEG00000012554	snrnp200	100	89.882	ENSODEG00000008366	SNRNP200	97	89.882	Octodon_degus
ENSAPEG00000012554	snrnp200	100	97.160	ENSONIG00000010714	snrnp200	97	97.160	Oreochromis_niloticus
ENSAPEG00000012554	snrnp200	100	90.043	ENSOCUG00000009864	SNRNP200	97	90.043	Oryctolagus_cuniculus
ENSAPEG00000012554	snrnp200	100	95.659	ENSORLG00000012286	snrnp200	99	95.802	Oryzias_latipes
ENSAPEG00000012554	snrnp200	100	95.766	ENSORLG00020004648	snrnp200	97	95.766	Oryzias_latipes_hni
ENSAPEG00000012554	snrnp200	100	95.766	ENSORLG00015019114	snrnp200	99	95.773	Oryzias_latipes_hsok
ENSAPEG00000012554	snrnp200	100	96.034	ENSOMEG00000011834	snrnp200	97	96.034	Oryzias_melastigma
ENSAPEG00000012554	snrnp200	100	90.150	ENSOGAG00000006879	SNRNP200	97	90.150	Otolemur_garnettii
ENSAPEG00000012554	snrnp200	100	89.567	ENSOARG00000013949	SNRNP200	97	89.567	Ovis_aries
ENSAPEG00000012554	snrnp200	100	90.096	ENSPPAG00000041559	SNRNP200	97	90.096	Pan_paniscus
ENSAPEG00000012554	snrnp200	100	90.150	ENSPPRG00000004435	SNRNP200	97	90.150	Panthera_pardus
ENSAPEG00000012554	snrnp200	100	89.668	ENSPTIG00000006380	SNRNP200	97	89.668	Panthera_tigris_altaica
ENSAPEG00000012554	snrnp200	100	90.096	ENSPTRG00000012230	SNRNP200	97	90.096	Pan_troglodytes
ENSAPEG00000012554	snrnp200	100	90.043	ENSPANG00000006017	SNRNP200	97	90.043	Papio_anubis
ENSAPEG00000012554	snrnp200	100	94.590	ENSPKIG00000014762	snrnp200	99	94.768	Paramormyrops_kingsleyae
ENSAPEG00000012554	snrnp200	100	89.139	ENSPSIG00000008580	SNRNP200	97	89.139	Pelodiscus_sinensis
ENSAPEG00000012554	snrnp200	100	90.043	ENSPCIG00000023050	SNRNP200	97	90.043	Phascolarctos_cinereus
ENSAPEG00000012554	snrnp200	100	96.626	ENSPFOG00000015110	snrnp200	97	96.626	Poecilia_formosa
ENSAPEG00000012554	snrnp200	99	96.700	ENSPLAG00000006711	snrnp200	99	96.700	Poecilia_latipinna
ENSAPEG00000012554	snrnp200	99	96.700	ENSPMEG00000021166	snrnp200	99	96.700	Poecilia_mexicana
ENSAPEG00000012554	snrnp200	100	96.731	ENSPREG00000008875	snrnp200	97	96.731	Poecilia_reticulata
ENSAPEG00000012554	snrnp200	100	90.096	ENSPPYG00000012068	SNRNP200	97	90.096	Pongo_abelii
ENSAPEG00000012554	snrnp200	98	94.872	ENSPCAG00000008536	SNRNP200	83	94.872	Procavia_capensis
ENSAPEG00000012554	snrnp200	100	90.096	ENSPCOG00000024608	SNRNP200	97	90.096	Propithecus_coquereli
ENSAPEG00000012554	snrnp200	95	91.304	ENSPVAG00000005860	SNRNP200	89	91.184	Pteropus_vampyrus
ENSAPEG00000012554	snrnp200	100	91.667	ENSPNYG00000017476	snrnp200	97	91.667	Pundamilia_nyererei
ENSAPEG00000012554	snrnp200	100	89.127	ENSPNAG00000010998	snrnp200	97	89.127	Pygocentrus_nattereri
ENSAPEG00000012554	snrnp200	100	90.150	ENSRNOG00000012157	Snrnp200	97	90.150	Rattus_norvegicus
ENSAPEG00000012554	snrnp200	100	90.096	ENSRBIG00000044690	-	97	90.096	Rhinopithecus_bieti
ENSAPEG00000012554	snrnp200	100	90.096	ENSRROG00000037952	-	97	90.096	Rhinopithecus_roxellana
ENSAPEG00000012554	snrnp200	100	90.043	ENSSBOG00000035471	SNRNP200	97	92.330	Saimiri_boliviensis_boliviensis
ENSAPEG00000012554	snrnp200	99	90.054	ENSSHAG00000000758	SNRNP200	99	90.060	Sarcophilus_harrisii
ENSAPEG00000012554	snrnp200	100	94.697	ENSSFOG00015018826	snrnp200	97	94.697	Scleropages_formosus
ENSAPEG00000012554	snrnp200	100	97.696	ENSSMAG00000005463	snrnp200	99	97.696	Scophthalmus_maximus
ENSAPEG00000012554	snrnp200	100	98.232	ENSSDUG00000021410	snrnp200	97	98.232	Seriola_dumerili
ENSAPEG00000012554	snrnp200	100	98.232	ENSSLDG00000010884	snrnp200	97	98.232	Seriola_lalandi_dorsalis
ENSAPEG00000012554	snrnp200	95	87.252	ENSSARG00000010728	SNRNP200	91	87.252	Sorex_araneus
ENSAPEG00000012554	snrnp200	100	90.203	ENSSPUG00000003726	-	97	90.203	Sphenodon_punctatus
ENSAPEG00000012554	snrnp200	100	98.821	ENSSPAG00000001842	snrnp200	98	98.821	Stegastes_partitus
ENSAPEG00000012554	snrnp200	100	90.203	ENSSSCG00000008127	SNRNP200	99	90.203	Sus_scrofa
ENSAPEG00000012554	snrnp200	98	81.642	ENSTGUG00000014475	-	98	81.642	Taeniopygia_guttata
ENSAPEG00000012554	snrnp200	100	96.195	ENSTRUG00000001307	snrnp200	97	96.195	Takifugu_rubripes
ENSAPEG00000012554	snrnp200	99	91.111	ENSTNIG00000004320	snrnp200	97	82.513	Tetraodon_nigroviridis
ENSAPEG00000012554	snrnp200	81	93.427	ENSTBEG00000003329	-	54	93.427	Tupaia_belangeri
ENSAPEG00000012554	snrnp200	100	89.936	ENSTTRG00000004983	SNRNP200	97	89.936	Tursiops_truncatus
ENSAPEG00000012554	snrnp200	83	82.059	ENSUAMG00000008395	-	90	81.753	Ursus_americanus
ENSAPEG00000012554	snrnp200	100	90.150	ENSUMAG00000012385	SNRNP200	97	90.150	Ursus_maritimus
ENSAPEG00000012554	snrnp200	85	93.361	ENSVPAG00000006434	SNRNP200	53	93.361	Vicugna_pacos
ENSAPEG00000012554	snrnp200	100	90.203	ENSVVUG00000026247	SNRNP200	99	90.203	Vulpes_vulpes
ENSAPEG00000012554	snrnp200	100	89.930	ENSXETG00000001243	snrnp200	97	89.930	Xenopus_tropicalis
ENSAPEG00000012554	snrnp200	99	96.997	ENSXMAG00000002058	snrnp200	98	96.997	Xiphophorus_maculatus