EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000012623 (Gene tree)
Gene ID
-
Gene Symbol
polr2a
Alias
im:7136071
Full Name
polymerase (RNA) II (DNA directed) polypeptide A
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
13920 bases
Position
chr23:21487989-21501908
Accession
ZDB-GENE-041008-78
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000017819RNA_pol_Rpb1_5PF04998.172.4e-10111
ENSAPEP00000017776RNA_pol_Rpb1_5PF04998.172.6e-10111
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29131
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29231
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29331
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29431
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29531
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29631
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29731
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29831
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-29931
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291031
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291131
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291231
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291331
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291431
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291531
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291631
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291731
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291831
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-291931
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292031
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292131
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292231
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292331
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292431
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292531
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292631
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292731
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292831
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-292931
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-293031
ENSAPEP00000017819RNA_pol_Rpb1_RPF05001.134e-293131
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23132
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23232
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23332
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23432
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23532
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23632
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23732
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23832
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-23932
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231032
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231132
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231232
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231332
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231432
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231532
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231632
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231732
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231832
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-231932
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232032
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232132
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232232
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232332
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232432
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232532
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232632
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232732
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232832
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-232932
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-233032
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-233132
ENSAPEP00000017776RNA_pol_Rpb1_RPF05001.131.1e-233232
ENSAPEP00000017819RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSAPEP00000017776RNA_pol_Rpb1_4PF05000.171.3e-3711
ENSAPEP00000017819RNA_pol_Rpb1_2PF00623.206.1e-7511
ENSAPEP00000017776RNA_pol_Rpb1_2PF00623.206.3e-7511
ENSAPEP00000017819RNA_pol_Rpb1_3PF04983.183e-5011
ENSAPEP00000017776RNA_pol_Rpb1_3PF04983.183.1e-5011
ENSAPEP00000017819RNA_pol_Rpb1_1PF04997.125.8e-10911
ENSAPEP00000017776RNA_pol_Rpb1_1PF04997.126e-10911
ENSAPEP00000017819RNA_pol_Rpb1_7PF04990.126.5e-5511
ENSAPEP00000017776RNA_pol_Rpb1_7PF04990.126.7e-5511
ENSAPEP00000017819RNA_pol_Rpb1_6PF04992.143e-6711
ENSAPEP00000017776RNA_pol_Rpb1_6PF04992.143.1e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000018275-8681-ENSAPEP000000177761966 (aa)--
ENSAPET00000018318-5787-ENSAPEP000000178191928 (aa)--
Gene Model
Click here to download ENSAPEG00000012623's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012623's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000012623polr2a5833.048ENSAPEG00000016105polr1a7233.012
ENSAPEG00000012623polr2a6838.100ENSAPEG00000013351polr3a9137.859
ENSAPEG00000012623polr2a6838.251ENSAPEG00000001966-9138.011
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000012623polr2a8799.814ENSAPOG00000006552polr2a9099.814Acanthochromis_polyacanthus
ENSAPEG00000012623polr2a8294.176ENSAMEG00000016265-8294.183Ailuropoda_melanoleuca
ENSAPEG00000012623polr2a10099.066ENSACIG00000015982polr2a10099.066Amphilophus_citrinellus
ENSAPEG00000012623polr2a10097.792ENSAOCG00000004255polr2a10095.954Amphiprion_ocellaris
ENSAPEG00000012623polr2a10099.135ENSATEG00000019644polr2a10099.135Anabas_testudineus
ENSAPEG00000012623polr2a8295.031ENSACAG00000014561POLR2A8295.037Anolis_carolinensis
ENSAPEG00000012623polr2a8294.538ENSANAG00000020093-8294.730Aotus_nancymaae
ENSAPEG00000012623polr2a10098.830ENSACLG00000006735polr2a10098.830Astatotilapia_calliptera
ENSAPEG00000012623polr2a10098.237ENSAMXG00000020046polr2a10098.237Astyanax_mexicanus
ENSAPEG00000012623polr2a8294.538ENSBTAG00000046765POLR2A8294.544Bos_taurus
ENSAPEG00000012623polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSAPEG00000012623polr2a8694.475ENSCAFG00000016532POLR2A9994.482Canis_familiaris
ENSAPEG00000012623polr2a8293.610ENSCAFG00020007929-8293.618Canis_lupus_dingo
ENSAPEG00000012623polr2a8294.538ENSCHIG00000027173-8294.544Capra_hircus
ENSAPEG00000012623polr2a9292.244ENSTSYG00000012803-8591.832Carlito_syrichta
ENSAPEG00000012623polr2a9891.051ENSCAPG00000001882-10093.616Cavia_aperea
ENSAPEG00000012623polr2a9988.931ENSCPOG00000014812-10093.366Cavia_porcellus
ENSAPEG00000012623polr2a8294.538ENSCCAG00000020938-8294.730Cebus_capucinus
ENSAPEG00000012623polr2a8294.538ENSCATG00000013680-8294.544Cercocebus_atys
ENSAPEG00000012623polr2a8294.413ENSCLAG00000012196-8294.603Chinchilla_lanigera
ENSAPEG00000012623polr2a8285.750ENSCSAG00000011644-8285.767Chlorocebus_sabaeus
ENSAPEG00000012623polr2a9184.022ENSCPBG00000012697POLR2A9985.964Chrysemys_picta_bellii
ENSAPEG00000012623polr2a9876.974ENSCING00000007884-9977.537Ciona_intestinalis
ENSAPEG00000012623polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSAPEG00000012623polr2a8293.855ENSCANG00000010622-8293.862Colobus_angolensis_palliatus
ENSAPEG00000012623polr2a8189.447ENSCGRG00001003538Polr2a8189.460Cricetulus_griseus_chok1gshd
ENSAPEG00000012623polr2a8290.798ENSCGRG00000012105Polr2a9390.809Cricetulus_griseus_crigri
ENSAPEG00000012623polr2a9998.080ENSCSEG00000002635polr2a10098.080Cynoglossus_semilaevis
ENSAPEG00000012623polr2a10098.881ENSCVAG00000005156polr2a10098.881Cyprinodon_variegatus
ENSAPEG00000012623polr2a10097.712ENSDARG00000099966polr2a10097.712Danio_rerio
ENSAPEG00000012623polr2a8291.167ENSDNOG00000016482-8291.178Dasypus_novemcinctus
ENSAPEG00000012623polr2a8294.538ENSDORG00000008667Polr2a8294.730Dipodomys_ordii
ENSAPEG00000012623polr2a9970.148FBgn0003277RpII2159974.471Drosophila_melanogaster
ENSAPEG00000012623polr2a9490.163ENSETEG00000002540-8791.267Echinops_telfairi
ENSAPEG00000012623polr2a8287.523ENSEBUG00000013967polr2a8287.508Eptatretus_burgeri
ENSAPEG00000012623polr2a8292.489ENSEASG00005019114-8392.498Equus_asinus_asinus
ENSAPEG00000012623polr2a8294.538ENSECAG00000018485POLR2A8294.544Equus_caballus
ENSAPEG00000012623polr2a8594.459ENSEEUG00000001154-9594.459Erinaceus_europaeus
ENSAPEG00000012623polr2a8895.521ENSELUG00000014284polr2a8495.521Esox_lucius
ENSAPEG00000012623polr2a8294.600ENSFDAG00000008287-8294.606Fukomys_damarensis
ENSAPEG00000012623polr2a9998.591ENSFHEG00000001768polr2a10098.591Fundulus_heteroclitus
ENSAPEG00000012623polr2a9993.313ENSGMOG00000007725polr2a10093.313Gadus_morhua
ENSAPEG00000012623polr2a99100.000ENSGAFG00000005389polr2a10093.951Gambusia_affinis
ENSAPEG00000012623polr2a9994.619ENSGACG00000019366polr2a10094.400Gasterosteus_aculeatus
ENSAPEG00000012623polr2a8292.446ENSGGOG00000014800-9692.995Gorilla_gorilla
ENSAPEG00000012623polr2a9998.793ENSHBUG00000018937polr2a10098.793Haplochromis_burtoni
ENSAPEG00000012623polr2a8294.600ENSHGLG00000012381POLR2A8294.794Heterocephalus_glaber_female
ENSAPEG00000012623polr2a8294.600ENSHGLG00100014843POLR2A8294.794Heterocephalus_glaber_male
ENSAPEG00000012623polr2a10098.271ENSHCOG00000011874polr2a10098.271Hippocampus_comes
ENSAPEG00000012623polr2a10097.718ENSIPUG00000002613Polr2a10097.718Ictalurus_punctatus
ENSAPEG00000012623polr2a8294.538ENSSTOG00000001304-8294.730Ictidomys_tridecemlineatus
ENSAPEG00000012623polr2a8294.538ENSJJAG00000013049Polr2a8294.730Jaculus_jaculus
ENSAPEG00000012623polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSAPEG00000012623polr2a9999.033ENSLBEG00000027652polr2a10099.033Labrus_bergylta
ENSAPEG00000012623polr2a8085.769ENSLACG00000012071POLR2A8185.841Latimeria_chalumnae
ENSAPEG00000012623polr2a8997.290ENSLOCG00000013863polr2a9796.834Lepisosteus_oculatus
ENSAPEG00000012623polr2a9991.272ENSLAFG00000008626-9794.544Loxodonta_africana
ENSAPEG00000012623polr2a5193.258ENSMFAG00000007042-9993.258Macaca_fascicularis
ENSAPEG00000012623polr2a8294.538ENSMMUG00000023620-9194.544Macaca_mulatta
ENSAPEG00000012623polr2a8294.103ENSMNEG00000040407-8294.110Macaca_nemestrina
ENSAPEG00000012623polr2a8090.208ENSMLEG00000030263-9993.258Mandrillus_leucophaeus
ENSAPEG00000012623polr2a10099.034ENSMAMG00000003351polr2a10099.034Mastacembelus_armatus
ENSAPEG00000012623polr2a10098.830ENSMZEG00005021429polr2a10098.830Maylandia_zebra
ENSAPEG00000012623polr2a5194.190ENSMAUG00000021055-9994.190Mesocricetus_auratus
ENSAPEG00000012623polr2a8294.475ENSMICG00000013372-9893.654Microcebus_murinus
ENSAPEG00000012623polr2a9992.259ENSMOCG00000018279Polr2a10092.269Microtus_ochrogaster
ENSAPEG00000012623polr2a9098.511ENSMMOG00000012515polr2a9298.511Mola_mola
ENSAPEG00000012623polr2a8294.289ENSMODG00000007009-8294.296Monodelphis_domestica
ENSAPEG00000012623polr2a9495.849ENSMALG00000008716polr2a9998.856Monopterus_albus
ENSAPEG00000012623polr2a8294.538MGP_CAROLIEiJ_G0016587Polr2a8294.730Mus_caroli
ENSAPEG00000012623polr2a8294.538ENSMUSG00000005198Polr2a8294.730Mus_musculus
ENSAPEG00000012623polr2a8292.398MGP_PahariEiJ_G0017718Polr2a8292.407Mus_pahari
ENSAPEG00000012623polr2a8294.538MGP_SPRETEiJ_G0017423Polr2a8294.730Mus_spretus
ENSAPEG00000012623polr2a8294.538ENSMPUG00000009648-8294.544Mustela_putorius_furo
ENSAPEG00000012623polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSAPEG00000012623polr2a8294.538ENSNGAG00000002543Polr2a8294.730Nannospalax_galili
ENSAPEG00000012623polr2a10098.963ENSNBRG00000002005polr2a10098.963Neolamprologus_brichardi
ENSAPEG00000012623polr2a8194.723ENSNLEG00000009460-8294.730Nomascus_leucogenys
ENSAPEG00000012623polr2a9495.425ENSMEUG00000008611-9686.840Notamacropus_eugenii
ENSAPEG00000012623polr2a8094.251ENSOPRG00000015116-9994.251Ochotona_princeps
ENSAPEG00000012623polr2a8794.456ENSODEG00000017674-8590.074Octodon_degus
ENSAPEG00000012623polr2a10099.084ENSONIG00000009231polr2a10099.084Oreochromis_niloticus
ENSAPEG00000012623polr2a9990.460ENSOCUG00000017929-10094.420Oryctolagus_cuniculus
ENSAPEG00000012623polr2a10098.755ENSORLG00000006431polr2a10098.755Oryzias_latipes
ENSAPEG00000012623polr2a10098.755ENSORLG00020010235polr2a10098.755Oryzias_latipes_hni
ENSAPEG00000012623polr2a10098.651ENSORLG00015007075polr2a10098.651Oryzias_latipes_hsok
ENSAPEG00000012623polr2a9896.080ENSOMEG00000010713polr2a10098.444Oryzias_melastigma
ENSAPEG00000012623polr2a8294.538ENSOGAG00000033608-8294.544Otolemur_garnettii
ENSAPEG00000012623polr2a9194.538ENSOARG00000013874-9091.816Ovis_aries
ENSAPEG00000012623polr2a8194.626ENSPPAG00000043734-8990.277Pan_paniscus
ENSAPEG00000012623polr2a8194.723ENSPTRG00000008691POLR2A8294.730Pan_troglodytes
ENSAPEG00000012623polr2a8293.855ENSPANG00000024099-8294.032Papio_anubis
ENSAPEG00000012623polr2a8196.118ENSPKIG00000005727polr2a8596.118Paramormyrops_kingsleyae
ENSAPEG00000012623polr2a9892.953ENSPSIG00000014006POLR2A10092.875Pelodiscus_sinensis
ENSAPEG00000012623polr2a10098.007ENSPMGG00000019734polr2a10098.007Periophthalmus_magnuspinnatus
ENSAPEG00000012623polr2a8294.538ENSPEMG00000012521Polr2a8294.730Peromyscus_maniculatus_bairdii
ENSAPEG00000012623polr2a8694.293ENSPCIG00000028851-8294.293Phascolarctos_cinereus
ENSAPEG00000012623polr2a9998.892ENSPFOG00000007890polr2a9998.892Poecilia_formosa
ENSAPEG00000012623polr2a9998.892ENSPLAG00000007399polr2a9998.892Poecilia_latipinna
ENSAPEG00000012623polr2a10098.923ENSPMEG00000002071polr2a9998.923Poecilia_mexicana
ENSAPEG00000012623polr2a10098.911ENSPREG00000013122polr2a10098.911Poecilia_reticulata
ENSAPEG00000012623polr2a8294.538ENSPPYG00000007924-8294.544Pongo_abelii
ENSAPEG00000012623polr2a7495.263ENSPCAG00000006951-7495.263Procavia_capensis
ENSAPEG00000012623polr2a8194.723ENSPCOG00000025260-8294.730Propithecus_coquereli
ENSAPEG00000012623polr2a8294.227ENSPVAG00000005069-8294.234Pteropus_vampyrus
ENSAPEG00000012623polr2a10098.881ENSPNYG00000022340polr2a10098.881Pundamilia_nyererei
ENSAPEG00000012623polr2a10098.220ENSPNAG00000011237polr2a10098.220Pygocentrus_nattereri
ENSAPEG00000012623polr2a8294.475ENSRNOG00000028834Polr2a8294.482Rattus_norvegicus
ENSAPEG00000012623polr2a8294.165ENSRBIG00000002471-9194.172Rhinopithecus_bieti
ENSAPEG00000012623polr2a8294.538ENSRROG00000029583-8993.676Rhinopithecus_roxellana
ENSAPEG00000012623polr2a8450.400YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSAPEG00000012623polr2a8294.538ENSSBOG00000000808-8294.730Saimiri_boliviensis_boliviensis
ENSAPEG00000012623polr2a9394.289ENSSHAG00000002858-8494.296Sarcophilus_harrisii
ENSAPEG00000012623polr2a9997.617ENSSFOG00015023275polr2a10097.617Scleropages_formosus
ENSAPEG00000012623polr2a10096.490ENSSMAG00000009137polr2a10095.982Scophthalmus_maximus
ENSAPEG00000012623polr2a10099.390ENSSDUG00000020466polr2a10099.390Seriola_dumerili
ENSAPEG00000012623polr2a10099.339ENSSLDG00000020613polr2a10099.339Seriola_lalandi_dorsalis
ENSAPEG00000012623polr2a9788.218ENSSARG00000005875-9990.954Sorex_araneus
ENSAPEG00000012623polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSAPEG00000012623polr2a8293.606ENSSSCG00000028278-8293.614Sus_scrofa
ENSAPEG00000012623polr2a9893.186ENSTRUG00000012320polr2a8193.186Takifugu_rubripes
ENSAPEG00000012623polr2a9496.203ENSTNIG00000010136polr2a10095.929Tetraodon_nigroviridis
ENSAPEG00000012623polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSAPEG00000012623polr2a8292.862ENSTTRG00000014273-8292.870Tursiops_truncatus
ENSAPEG00000012623polr2a9394.293ENSUAMG00000014866-10091.589Ursus_americanus
ENSAPEG00000012623polr2a7491.757ENSUMAG00000015732-8391.061Ursus_maritimus
ENSAPEG00000012623polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSAPEG00000012623polr2a8294.475ENSVVUG00000027878-8394.482Vulpes_vulpes
ENSAPEG00000012623polr2a8194.399ENSXETG00000012465polr2a8294.406Xenopus_tropicalis
ENSAPEG00000012623polr2a9698.086ENSXCOG00000001804polr2a10098.086Xiphophorus_couchianus
ENSAPEG00000012623polr2a10098.911ENSXMAG00000015687polr2a10098.911Xiphophorus_maculatus

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