EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000012690 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 4853 bases
Position: chr3:36276926-36281778
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000017763	ECR1_N	PF14382.6	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018262	-	501	-	ENSAPEP00000017763	166 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012690	exosc1	96	78.395	ENSG00000171311	EXOSC1	91	78.395	Homo_sapiens
ENSAPEG00000012690	exosc1	97	87.222	ENSAPOG00000007822	exosc1	93	87.222	Acanthochromis_polyacanthus
ENSAPEG00000012690	exosc1	96	71.508	ENSAMEG00000000129	EXOSC1	92	71.508	Ailuropoda_melanoleuca
ENSAPEG00000012690	exosc1	97	86.111	ENSACIG00000018956	exosc1	88	86.111	Amphilophus_citrinellus
ENSAPEG00000012690	exosc1	100	97.619	ENSAOCG00000010699	exosc1	100	97.619	Amphiprion_ocellaris
ENSAPEG00000012690	exosc1	97	87.222	ENSATEG00000018683	exosc1	93	87.222	Anabas_testudineus
ENSAPEG00000012690	exosc1	96	68.715	ENSACAG00000002101	EXOSC1	92	68.715	Anolis_carolinensis
ENSAPEG00000012690	exosc1	96	78.395	ENSANAG00000034669	EXOSC1	91	78.395	Aotus_nancymaae
ENSAPEG00000012690	exosc1	97	86.667	ENSACLG00000021243	exosc1	93	86.667	Astatotilapia_calliptera
ENSAPEG00000012690	exosc1	97	83.889	ENSAMXG00000011116	exosc1	93	83.889	Astyanax_mexicanus
ENSAPEG00000012690	exosc1	96	71.508	ENSBTAG00000012699	EXOSC1	92	71.508	Bos_taurus
ENSAPEG00000012690	exosc1	89	31.609	WBGene00012966	exos-1	84	31.609	Caenorhabditis_elegans
ENSAPEG00000012690	exosc1	96	77.778	ENSCJAG00000016586	EXOSC1	91	77.778	Callithrix_jacchus
ENSAPEG00000012690	exosc1	96	70.950	ENSCAFG00000009068	EXOSC1	86	70.950	Canis_familiaris
ENSAPEG00000012690	exosc1	96	70.950	ENSCAFG00020006002	EXOSC1	86	70.950	Canis_lupus_dingo
ENSAPEG00000012690	exosc1	96	71.508	ENSCHIG00000015253	EXOSC1	92	71.508	Capra_hircus
ENSAPEG00000012690	exosc1	96	77.160	ENSTSYG00000000760	EXOSC1	91	77.160	Carlito_syrichta
ENSAPEG00000012690	exosc1	96	70.950	ENSCPOG00000001173	EXOSC1	92	70.950	Cavia_porcellus
ENSAPEG00000012690	exosc1	96	45.122	ENSCCAG00000023986	EXOSC1	91	45.122	Cebus_capucinus
ENSAPEG00000012690	exosc1	96	78.395	ENSCATG00000034114	EXOSC1	91	78.395	Cercocebus_atys
ENSAPEG00000012690	exosc1	96	70.950	ENSCLAG00000002463	EXOSC1	92	70.950	Chinchilla_lanigera
ENSAPEG00000012690	exosc1	96	70.391	ENSCSAG00000005870	EXOSC1	92	70.391	Chlorocebus_sabaeus
ENSAPEG00000012690	exosc1	92	57.310	ENSCHOG00000006477	EXOSC1	92	57.310	Choloepus_hoffmanni
ENSAPEG00000012690	exosc1	60	64.706	ENSCPBG00000011949	EXOSC1	84	64.706	Chrysemys_picta_bellii
ENSAPEG00000012690	exosc1	96	42.458	ENSCING00000022734	-	86	42.458	Ciona_intestinalis
ENSAPEG00000012690	exosc1	92	46.512	ENSCSAVG00000010865	-	88	46.512	Ciona_savignyi
ENSAPEG00000012690	exosc1	96	78.395	ENSCANG00000034159	EXOSC1	91	78.395	Colobus_angolensis_palliatus
ENSAPEG00000012690	exosc1	96	69.832	ENSCGRG00001000335	Exosc1	92	69.832	Cricetulus_griseus_chok1gshd
ENSAPEG00000012690	exosc1	96	69.832	ENSCGRG00000011602	Exosc1	92	69.832	Cricetulus_griseus_crigri
ENSAPEG00000012690	exosc1	97	70.556	ENSCSEG00000007895	exosc1	89	70.556	Cynoglossus_semilaevis
ENSAPEG00000012690	exosc1	97	87.117	ENSCVAG00000016748	exosc1	92	87.117	Cyprinodon_variegatus
ENSAPEG00000012690	exosc1	97	84.444	ENSDARG00000059841	exosc1	93	84.444	Danio_rerio
ENSAPEG00000012690	exosc1	68	64.394	ENSDNOG00000007983	EXOSC1	89	64.394	Dasypus_novemcinctus
ENSAPEG00000012690	exosc1	96	70.391	ENSDORG00000016528	Exosc1	92	70.391	Dipodomys_ordii
ENSAPEG00000012690	exosc1	90	41.520	FBgn0032346	Csl4	84	41.520	Drosophila_melanogaster
ENSAPEG00000012690	exosc1	96	68.715	ENSETEG00000002469	-	92	68.715	Echinops_telfairi
ENSAPEG00000012690	exosc1	96	57.692	ENSEBUG00000008164	exosc1	91	57.692	Eptatretus_burgeri
ENSAPEG00000012690	exosc1	96	60.894	ENSEASG00005008684	EXOSC1	91	60.894	Equus_asinus_asinus
ENSAPEG00000012690	exosc1	60	52.941	ENSECAG00000010621	EXOSC1	61	52.941	Equus_caballus
ENSAPEG00000012690	exosc1	96	69.832	ENSEEUG00000005647	EXOSC1	92	69.832	Erinaceus_europaeus
ENSAPEG00000012690	exosc1	97	83.889	ENSELUG00000017369	exosc1	80	83.889	Esox_lucius
ENSAPEG00000012690	exosc1	96	79.012	ENSFCAG00000040563	EXOSC1	91	79.012	Felis_catus
ENSAPEG00000012690	exosc1	96	69.832	ENSFALG00000008450	EXOSC1	92	69.832	Ficedula_albicollis
ENSAPEG00000012690	exosc1	96	70.950	ENSFDAG00000000846	EXOSC1	92	70.950	Fukomys_damarensis
ENSAPEG00000012690	exosc1	97	78.889	ENSFHEG00000009154	exosc1	93	78.889	Fundulus_heteroclitus
ENSAPEG00000012690	exosc1	97	83.889	ENSGMOG00000008993	exosc1	93	83.889	Gadus_morhua
ENSAPEG00000012690	exosc1	96	55.866	ENSGALG00000039917	EXOSC1	99	71.034	Gallus_gallus
ENSAPEG00000012690	exosc1	97	78.889	ENSGAFG00000010265	exosc1	88	78.889	Gambusia_affinis
ENSAPEG00000012690	exosc1	97	83.333	ENSGACG00000018936	exosc1	93	83.333	Gasterosteus_aculeatus
ENSAPEG00000012690	exosc1	96	68.156	ENSGAGG00000019192	EXOSC1	92	68.156	Gopherus_agassizii
ENSAPEG00000012690	exosc1	96	65.432	ENSGGOG00000003099	EXOSC1	90	65.432	Gorilla_gorilla
ENSAPEG00000012690	exosc1	97	86.667	ENSHBUG00000017857	exosc1	94	86.667	Haplochromis_burtoni
ENSAPEG00000012690	exosc1	96	70.391	ENSHGLG00000016927	EXOSC1	92	70.391	Heterocephalus_glaber_female
ENSAPEG00000012690	exosc1	96	70.391	ENSHGLG00100012208	EXOSC1	92	70.391	Heterocephalus_glaber_male
ENSAPEG00000012690	exosc1	97	85.000	ENSHCOG00000019882	exosc1	93	85.000	Hippocampus_comes
ENSAPEG00000012690	exosc1	97	81.667	ENSIPUG00000007685	exosc1	93	81.667	Ictalurus_punctatus
ENSAPEG00000012690	exosc1	96	70.391	ENSSTOG00000006615	EXOSC1	92	70.391	Ictidomys_tridecemlineatus
ENSAPEG00000012690	exosc1	61	63.107	ENSSTOG00000029860	-	78	63.107	Ictidomys_tridecemlineatus
ENSAPEG00000012690	exosc1	96	70.950	ENSJJAG00000013311	Exosc1	92	70.950	Jaculus_jaculus
ENSAPEG00000012690	exosc1	97	81.667	ENSKMAG00000001202	exosc1	76	81.667	Kryptolebias_marmoratus
ENSAPEG00000012690	exosc1	97	89.759	ENSLBEG00000011448	exosc1	92	89.759	Labrus_bergylta
ENSAPEG00000012690	exosc1	97	67.066	ENSLOCG00000003776	exosc1	91	67.066	Lepisosteus_oculatus
ENSAPEG00000012690	exosc1	96	70.391	ENSLAFG00000015983	EXOSC1	92	70.391	Loxodonta_africana
ENSAPEG00000012690	exosc1	96	78.395	ENSMFAG00000001493	EXOSC1	91	78.395	Macaca_fascicularis
ENSAPEG00000012690	exosc1	96	78.395	ENSMMUG00000020028	EXOSC1	91	78.395	Macaca_mulatta
ENSAPEG00000012690	exosc1	96	78.395	ENSMNEG00000029816	EXOSC1	91	78.395	Macaca_nemestrina
ENSAPEG00000012690	exosc1	96	69.643	ENSMLEG00000027643	EXOSC1	91	69.643	Mandrillus_leucophaeus
ENSAPEG00000012690	exosc1	97	87.222	ENSMAMG00000012200	exosc1	93	87.222	Mastacembelus_armatus
ENSAPEG00000012690	exosc1	97	86.667	ENSMZEG00005007042	exosc1	93	86.667	Maylandia_zebra
ENSAPEG00000012690	exosc1	96	59.218	ENSMAUG00000020462	-	91	59.218	Mesocricetus_auratus
ENSAPEG00000012690	exosc1	96	78.395	ENSMICG00000007664	EXOSC1	91	78.395	Microcebus_murinus
ENSAPEG00000012690	exosc1	96	69.832	ENSMOCG00000006004	-	92	69.832	Microtus_ochrogaster
ENSAPEG00000012690	exosc1	96	67.232	ENSMOCG00000017124	-	91	67.232	Microtus_ochrogaster
ENSAPEG00000012690	exosc1	97	77.640	ENSMMOG00000021403	exosc1	93	77.640	Mola_mola
ENSAPEG00000012690	exosc1	96	71.111	ENSMODG00000004213	EXOSC1	92	71.111	Monodelphis_domestica
ENSAPEG00000012690	exosc1	97	86.111	ENSMALG00000007061	exosc1	90	86.111	Monopterus_albus
ENSAPEG00000012690	exosc1	96	69.274	MGP_CAROLIEiJ_G0022959	Exosc1	92	69.274	Mus_caroli
ENSAPEG00000012690	exosc1	96	69.274	ENSMUSG00000034321	Exosc1	92	69.274	Mus_musculus
ENSAPEG00000012690	exosc1	96	69.832	MGP_PahariEiJ_G0014449	Exosc1	92	69.832	Mus_pahari
ENSAPEG00000012690	exosc1	96	69.274	MGP_SPRETEiJ_G0023880	Exosc1	92	69.274	Mus_spretus
ENSAPEG00000012690	exosc1	96	71.508	ENSMPUG00000017044	EXOSC1	92	71.508	Mustela_putorius_furo
ENSAPEG00000012690	exosc1	96	70.950	ENSMLUG00000009228	EXOSC1	92	70.950	Myotis_lucifugus
ENSAPEG00000012690	exosc1	96	68.156	ENSNGAG00000022033	Exosc1	92	68.156	Nannospalax_galili
ENSAPEG00000012690	exosc1	97	77.640	ENSNBRG00000024007	exosc1	90	77.640	Neolamprologus_brichardi
ENSAPEG00000012690	exosc1	96	77.778	ENSNLEG00000013872	EXOSC1	91	77.778	Nomascus_leucogenys
ENSAPEG00000012690	exosc1	59	69.000	ENSMEUG00000002246	EXOSC1	87	69.000	Notamacropus_eugenii
ENSAPEG00000012690	exosc1	96	70.391	ENSOPRG00000005065	EXOSC1	92	70.391	Ochotona_princeps
ENSAPEG00000012690	exosc1	96	70.950	ENSODEG00000016709	EXOSC1	92	70.950	Octodon_degus
ENSAPEG00000012690	exosc1	97	86.667	ENSONIG00000017683	exosc1	92	86.667	Oreochromis_niloticus
ENSAPEG00000012690	exosc1	57	74.561	ENSOANG00000006563	EXOSC1	98	72.358	Ornithorhynchus_anatinus
ENSAPEG00000012690	exosc1	96	65.922	ENSOCUG00000026461	-	92	65.922	Oryctolagus_cuniculus
ENSAPEG00000012690	exosc1	96	69.444	ENSOCUG00000011898	-	92	69.444	Oryctolagus_cuniculus
ENSAPEG00000012690	exosc1	97	81.768	ENSORLG00000011595	exosc1	93	81.768	Oryzias_latipes
ENSAPEG00000012690	exosc1	97	81.768	ENSORLG00020005831	exosc1	93	81.768	Oryzias_latipes_hni
ENSAPEG00000012690	exosc1	97	81.215	ENSORLG00015004317	exosc1	93	81.215	Oryzias_latipes_hsok
ENSAPEG00000012690	exosc1	97	74.699	ENSOMEG00000013907	exosc1	91	74.699	Oryzias_melastigma
ENSAPEG00000012690	exosc1	96	70.391	ENSOGAG00000016259	EXOSC1	92	70.391	Otolemur_garnettii
ENSAPEG00000012690	exosc1	96	70.950	ENSOARG00000010136	EXOSC1	92	70.950	Ovis_aries
ENSAPEG00000012690	exosc1	96	65.217	ENSPPAG00000039842	EXOSC1	92	65.217	Pan_paniscus
ENSAPEG00000012690	exosc1	96	79.012	ENSPPRG00000023366	EXOSC1	91	79.012	Panthera_pardus
ENSAPEG00000012690	exosc1	96	79.012	ENSPTIG00000017701	EXOSC1	91	79.012	Panthera_tigris_altaica
ENSAPEG00000012690	exosc1	96	78.395	ENSPTRG00000002808	EXOSC1	91	78.395	Pan_troglodytes
ENSAPEG00000012690	exosc1	96	78.395	ENSPANG00000021324	EXOSC1	91	78.395	Papio_anubis
ENSAPEG00000012690	exosc1	97	81.667	ENSPKIG00000016037	exosc1	93	81.667	Paramormyrops_kingsleyae
ENSAPEG00000012690	exosc1	95	55.789	ENSPSIG00000013571	EXOSC1	98	64.463	Pelodiscus_sinensis
ENSAPEG00000012690	exosc1	97	71.111	ENSPMGG00000014002	exosc1	92	71.111	Periophthalmus_magnuspinnatus
ENSAPEG00000012690	exosc1	96	69.832	ENSPEMG00000010710	-	92	69.832	Peromyscus_maniculatus_bairdii
ENSAPEG00000012690	exosc1	96	60.000	ENSPMAG00000000195	exosc1	92	60.000	Petromyzon_marinus
ENSAPEG00000012690	exosc1	96	69.832	ENSPCIG00000002210	EXOSC1	91	69.832	Phascolarctos_cinereus
ENSAPEG00000012690	exosc1	97	78.333	ENSPFOG00000006755	exosc1	88	78.333	Poecilia_formosa
ENSAPEG00000012690	exosc1	97	78.333	ENSPLAG00000005880	exosc1	93	78.333	Poecilia_latipinna
ENSAPEG00000012690	exosc1	97	78.333	ENSPMEG00000015598	exosc1	88	78.333	Poecilia_mexicana
ENSAPEG00000012690	exosc1	97	65.556	ENSPREG00000000405	exosc1	87	65.556	Poecilia_reticulata
ENSAPEG00000012690	exosc1	96	70.950	ENSPPYG00000002531	EXOSC1	92	70.950	Pongo_abelii
ENSAPEG00000012690	exosc1	96	70.225	ENSPCAG00000009135	EXOSC1	91	70.225	Procavia_capensis
ENSAPEG00000012690	exosc1	96	73.125	ENSPCOG00000027539	EXOSC1	90	73.125	Propithecus_coquereli
ENSAPEG00000012690	exosc1	96	70.950	ENSPVAG00000003372	EXOSC1	92	70.950	Pteropus_vampyrus
ENSAPEG00000012690	exosc1	97	86.667	ENSPNYG00000021745	exosc1	93	86.667	Pundamilia_nyererei
ENSAPEG00000012690	exosc1	97	82.778	ENSPNAG00000001944	exosc1	93	82.778	Pygocentrus_nattereri
ENSAPEG00000012690	exosc1	96	69.832	ENSRNOG00000048708	Exosc1	92	69.832	Rattus_norvegicus
ENSAPEG00000012690	exosc1	96	78.395	ENSRBIG00000035618	EXOSC1	91	78.395	Rhinopithecus_bieti
ENSAPEG00000012690	exosc1	96	78.395	ENSRROG00000032589	EXOSC1	91	78.395	Rhinopithecus_roxellana
ENSAPEG00000012690	exosc1	63	31.250	YNL232W	CSL4	54	31.250	Saccharomyces_cerevisiae
ENSAPEG00000012690	exosc1	96	78.395	ENSSBOG00000000359	EXOSC1	91	78.395	Saimiri_boliviensis_boliviensis
ENSAPEG00000012690	exosc1	76	76.027	ENSSHAG00000018219	EXOSC1	99	76.027	Sarcophilus_harrisii
ENSAPEG00000012690	exosc1	97	80.000	ENSSFOG00015009069	exosc1	93	80.000	Scleropages_formosus
ENSAPEG00000012690	exosc1	96	80.899	ENSSFOG00015016289	-	92	80.899	Scleropages_formosus
ENSAPEG00000012690	exosc1	97	87.222	ENSSMAG00000003721	exosc1	93	87.222	Scophthalmus_maximus
ENSAPEG00000012690	exosc1	97	95.092	ENSSDUG00000002993	exosc1	92	95.092	Seriola_dumerili
ENSAPEG00000012690	exosc1	97	95.092	ENSSLDG00000025181	exosc1	92	95.092	Seriola_lalandi_dorsalis
ENSAPEG00000012690	exosc1	96	58.659	ENSSARG00000000162	EXOSC1	92	58.659	Sorex_araneus
ENSAPEG00000012690	exosc1	96	65.363	ENSSPUG00000012263	EXOSC1	92	65.363	Sphenodon_punctatus
ENSAPEG00000012690	exosc1	97	96.319	ENSSPAG00000016792	exosc1	77	96.319	Stegastes_partitus
ENSAPEG00000012690	exosc1	96	70.391	ENSSSCG00000010518	EXOSC1	84	70.391	Sus_scrofa
ENSAPEG00000012690	exosc1	96	69.274	ENSTGUG00000009692	EXOSC1	92	69.274	Taeniopygia_guttata
ENSAPEG00000012690	exosc1	97	79.755	ENSTRUG00000007706	exosc1	91	79.755	Takifugu_rubripes
ENSAPEG00000012690	exosc1	97	72.131	ENSTNIG00000014079	exosc1	92	72.131	Tetraodon_nigroviridis
ENSAPEG00000012690	exosc1	96	66.667	ENSTBEG00000006011	EXOSC1	92	66.667	Tupaia_belangeri
ENSAPEG00000012690	exosc1	96	71.508	ENSTTRG00000009887	EXOSC1	97	71.508	Tursiops_truncatus
ENSAPEG00000012690	exosc1	96	62.874	ENSUAMG00000010266	EXOSC1	91	62.874	Ursus_americanus
ENSAPEG00000012690	exosc1	96	62.874	ENSUMAG00000022002	EXOSC1	91	62.874	Ursus_maritimus
ENSAPEG00000012690	exosc1	96	70.950	ENSVVUG00000023192	EXOSC1	58	70.950	Vulpes_vulpes
ENSAPEG00000012690	exosc1	96	67.598	ENSXETG00000003434	exosc1	92	67.598	Xenopus_tropicalis
ENSAPEG00000012690	exosc1	61	73.554	ENSXCOG00000014499	exosc1	93	73.554	Xiphophorus_couchianus
ENSAPEG00000012690	exosc1	97	66.111	ENSXMAG00000023382	exosc1	87	66.111	Xiphophorus_maculatus