EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000012980 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 7250 bases
Position: chr13:4624897-4632146
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018174	zf-RNPHF	PF08080.12	8.7e-09	1	1
ENSAPEP00000018174	RRM_1	PF00076.22	1.5e-31	1	3
ENSAPEP00000018174	RRM_1	PF00076.22	1.5e-31	2	3
ENSAPEP00000018174	RRM_1	PF00076.22	1.5e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018678	-	1900	-	ENSAPEP00000018174	407 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000012980	hnrnph1	80	41.896	ENSAPEG00000007240	-	76	41.104
ENSAPEG00000012980	hnrnph1	94	72.596	ENSAPEG00000006201	hnrnph3	98	60.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012980	hnrnph1	100	99.263	ENSAPOG00000016614	hnrnph1	100	99.263	Acanthochromis_polyacanthus
ENSAPEG00000012980	hnrnph1	92	98.404	ENSACIG00000008964	hnrnph1	98	98.404	Amphilophus_citrinellus
ENSAPEG00000012980	hnrnph1	100	99.754	ENSAOCG00000008372	hnrnph1	100	99.754	Amphiprion_ocellaris
ENSAPEG00000012980	hnrnph1	100	99.509	ENSATEG00000002792	hnrnph1	100	99.509	Anabas_testudineus
ENSAPEG00000012980	hnrnph1	99	70.796	ENSACAG00000016323	-	91	75.060	Anolis_carolinensis
ENSAPEG00000012980	hnrnph1	84	94.101	ENSACLG00000003313	hnrnph1	97	94.101	Astatotilapia_calliptera
ENSAPEG00000012980	hnrnph1	99	83.333	ENSAMXG00000030703	hnrnph1l	84	83.578	Astyanax_mexicanus
ENSAPEG00000012980	hnrnph1	100	84.223	ENSAMXG00000002483	hnrnph1	99	88.918	Astyanax_mexicanus
ENSAPEG00000012980	hnrnph1	100	96.577	ENSCSEG00000015891	hnrnph1	100	96.577	Cynoglossus_semilaevis
ENSAPEG00000012980	hnrnph1	100	96.560	ENSCVAG00000014097	hnrnph1	100	96.560	Cyprinodon_variegatus
ENSAPEG00000012980	hnrnph1	95	88.689	ENSDARG00000005551	hnrnph1l	99	85.784	Danio_rerio
ENSAPEG00000012980	hnrnph1	93	88.421	ENSDARG00000040881	hnrnph1	94	88.947	Danio_rerio
ENSAPEG00000012980	hnrnph1	100	86.525	ENSELUG00000006715	hnrnph1	94	87.949	Esox_lucius
ENSAPEG00000012980	hnrnph1	96	85.263	ENSELUG00000021437	-	99	87.895	Esox_lucius
ENSAPEG00000012980	hnrnph1	100	94.595	ENSFHEG00000008474	hnrnph1	100	93.120	Fundulus_heteroclitus
ENSAPEG00000012980	hnrnph1	96	88.804	ENSGMOG00000006782	hnrnph1	97	88.804	Gadus_morhua
ENSAPEG00000012980	hnrnph1	100	97.789	ENSGAFG00000006280	hnrnph1	100	97.789	Gambusia_affinis
ENSAPEG00000012980	hnrnph1	100	93.120	ENSGACG00000018352	hnrnph1	99	90.777	Gasterosteus_aculeatus
ENSAPEG00000012980	hnrnph1	84	94.101	ENSHBUG00000010547	hnrnph1	98	94.101	Haplochromis_burtoni
ENSAPEG00000012980	hnrnph1	100	85.273	ENSHCOG00000004513	hnrnph1	100	88.599	Hippocampus_comes
ENSAPEG00000012980	hnrnph1	95	84.062	ENSIPUG00000024047	hnrnph1l	90	85.752	Ictalurus_punctatus
ENSAPEG00000012980	hnrnph1	100	83.010	ENSIPUG00000018262	hnrnph1	100	83.981	Ictalurus_punctatus
ENSAPEG00000012980	hnrnph1	100	96.098	ENSKMAG00000018802	hnrnph1	100	96.098	Kryptolebias_marmoratus
ENSAPEG00000012980	hnrnph1	100	97.789	ENSLBEG00000027811	hnrnph1	100	97.789	Labrus_bergylta
ENSAPEG00000012980	hnrnph1	94	83.623	ENSLOCG00000012510	hnrnph1	91	82.878	Lepisosteus_oculatus
ENSAPEG00000012980	hnrnph1	99	55.012	ENSMMUG00000017392	-	83	57.493	Macaca_mulatta
ENSAPEG00000012980	hnrnph1	99	54.734	ENSMNEG00000030544	-	83	57.493	Macaca_nemestrina
ENSAPEG00000012980	hnrnph1	86	92.204	ENSMAMG00000011478	hnrnph1	99	92.204	Mastacembelus_armatus
ENSAPEG00000012980	hnrnph1	100	98.034	ENSMZEG00005009791	hnrnph1	100	98.034	Maylandia_zebra
ENSAPEG00000012980	hnrnph1	92	95.263	ENSMMOG00000009064	hnrnph1	98	95.000	Mola_mola
ENSAPEG00000012980	hnrnph1	74	52.252	ENSMODG00000002200	-	99	51.652	Monodelphis_domestica
ENSAPEG00000012980	hnrnph1	93	94.444	ENSMALG00000003999	hnrnph1	99	94.444	Monopterus_albus
ENSAPEG00000012980	hnrnph1	84	94.101	ENSNBRG00000015406	hnrnph1	98	94.101	Neolamprologus_brichardi
ENSAPEG00000012980	hnrnph1	100	98.280	ENSONIG00000017754	hnrnph1	100	98.280	Oreochromis_niloticus
ENSAPEG00000012980	hnrnph1	100	95.884	ENSORLG00000006932	hnrnph1	100	95.884	Oryzias_latipes
ENSAPEG00000012980	hnrnph1	100	95.884	ENSORLG00020007881	hnrnph1	100	95.884	Oryzias_latipes_hni
ENSAPEG00000012980	hnrnph1	100	95.884	ENSORLG00015005306	hnrnph1	100	95.884	Oryzias_latipes_hsok
ENSAPEG00000012980	hnrnph1	100	98.039	ENSOMEG00000009827	hnrnph1	100	98.039	Oryzias_melastigma
ENSAPEG00000012980	hnrnph1	93	83.085	ENSPKIG00000009532	-	93	82.090	Paramormyrops_kingsleyae
ENSAPEG00000012980	hnrnph1	100	89.078	ENSPKIG00000018203	hnrnph1l	100	87.073	Paramormyrops_kingsleyae
ENSAPEG00000012980	hnrnph1	100	94.840	ENSPMGG00000012151	hnrnph1	100	94.840	Periophthalmus_magnuspinnatus
ENSAPEG00000012980	hnrnph1	100	97.789	ENSPFOG00000004097	hnrnph1	100	97.789	Poecilia_formosa
ENSAPEG00000012980	hnrnph1	100	97.789	ENSPLAG00000011771	hnrnph1	100	97.789	Poecilia_latipinna
ENSAPEG00000012980	hnrnph1	100	98.034	ENSPMEG00000019446	hnrnph1	100	98.034	Poecilia_mexicana
ENSAPEG00000012980	hnrnph1	100	98.034	ENSPREG00000005780	hnrnph1	100	98.034	Poecilia_reticulata
ENSAPEG00000012980	hnrnph1	100	98.034	ENSPNYG00000000204	hnrnph1	100	98.034	Pundamilia_nyererei
ENSAPEG00000012980	hnrnph1	99	84.597	ENSPNAG00000002784	hnrnph1l	99	83.824	Pygocentrus_nattereri
ENSAPEG00000012980	hnrnph1	100	83.738	ENSPNAG00000000439	hnrnph1	100	85.922	Pygocentrus_nattereri
ENSAPEG00000012980	hnrnph1	97	89.196	ENSSFOG00015016055	-	94	90.814	Scleropages_formosus
ENSAPEG00000012980	hnrnph1	98	90.773	ENSSFOG00015022796	hnrnph1l	99	89.764	Scleropages_formosus
ENSAPEG00000012980	hnrnph1	96	92.191	ENSSMAG00000007820	hnrnph1	96	95.276	Scophthalmus_maximus
ENSAPEG00000012980	hnrnph1	100	99.754	ENSSDUG00000008785	hnrnph1	100	99.754	Seriola_dumerili
ENSAPEG00000012980	hnrnph1	100	99.754	ENSSLDG00000010685	hnrnph1	100	99.754	Seriola_lalandi_dorsalis
ENSAPEG00000012980	hnrnph1	100	99.017	ENSSPAG00000009921	hnrnph1	100	99.017	Stegastes_partitus
ENSAPEG00000012980	hnrnph1	100	96.069	ENSTRUG00000020069	hnrnph1	100	96.069	Takifugu_rubripes
ENSAPEG00000012980	hnrnph1	99	73.059	ENSXETG00000018321	hnrnph1	85	78.437	Xenopus_tropicalis
ENSAPEG00000012980	hnrnph1	93	94.373	ENSXCOG00000009133	hnrnph1	97	94.373	Xiphophorus_couchianus
ENSAPEG00000012980	hnrnph1	92	98.138	ENSXMAG00000021332	hnrnph1	99	98.138	Xiphophorus_maculatus