EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000012996 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 10434 bases
Position: chr4:9284867-9295300
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018176	RRM_1	PF00076.22	2.7e-60	1	3
ENSAPEP00000018176	RRM_1	PF00076.22	2.7e-60	2	3
ENSAPEP00000018176	RRM_1	PF00076.22	2.7e-60	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018680	-	4509	-	ENSAPEP00000018176	764 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000012996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000012996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000012996	rbm28	100	51.314	ENSG00000106344	RBM28	100	50.000	Homo_sapiens
ENSAPEG00000012996	rbm28	100	93.359	ENSAPOG00000015512	rbm28	100	93.359	Acanthochromis_polyacanthus
ENSAPEG00000012996	rbm28	97	57.471	ENSAMEG00000004776	RBM28	63	57.895	Ailuropoda_melanoleuca
ENSAPEG00000012996	rbm28	56	74.883	ENSACIG00000023153	rbm28	91	74.883	Amphilophus_citrinellus
ENSAPEG00000012996	rbm28	100	98.042	ENSAOCG00000000462	rbm28	100	98.042	Amphiprion_ocellaris
ENSAPEG00000012996	rbm28	90	62.500	ENSANAG00000033922	RBM28	77	62.500	Aotus_nancymaae
ENSAPEG00000012996	rbm28	100	73.472	ENSACLG00000025024	rbm28	58	76.298	Astatotilapia_calliptera
ENSAPEG00000012996	rbm28	58	61.991	ENSAMXG00000000763	rbm28	98	59.954	Astyanax_mexicanus
ENSAPEG00000012996	rbm28	78	62.500	ENSBTAG00000017001	RBM28	77	62.500	Bos_taurus
ENSAPEG00000012996	rbm28	90	62.500	ENSCJAG00000017731	RBM28	76	62.500	Callithrix_jacchus
ENSAPEG00000012996	rbm28	100	51.538	ENSCAFG00000001667	RBM28	57	56.009	Canis_familiaris
ENSAPEG00000012996	rbm28	100	51.538	ENSCAFG00020021648	RBM28	57	56.009	Canis_lupus_dingo
ENSAPEG00000012996	rbm28	62	54.088	ENSCHIG00000014146	RBM28	57	55.479	Capra_hircus
ENSAPEG00000012996	rbm28	65	65.000	ENSTSYG00000002892	RBM28	77	65.000	Carlito_syrichta
ENSAPEG00000012996	rbm28	78	42.226	ENSCAPG00000013218	RBM28	76	61.600	Cavia_aperea
ENSAPEG00000012996	rbm28	64	53.360	ENSCPOG00000006253	RBM28	57	53.795	Cavia_porcellus
ENSAPEG00000012996	rbm28	100	49.548	ENSCCAG00000035105	RBM28	76	62.500	Cebus_capucinus
ENSAPEG00000012996	rbm28	100	50.877	ENSCATG00000040497	RBM28	76	62.500	Cercocebus_atys
ENSAPEG00000012996	rbm28	62	52.083	ENSCLAG00000003707	RBM28	60	53.864	Chinchilla_lanigera
ENSAPEG00000012996	rbm28	100	50.943	ENSCSAG00000010161	RBM28	57	54.525	Chlorocebus_sabaeus
ENSAPEG00000012996	rbm28	56	54.839	ENSCHOG00000001994	-	63	54.839	Choloepus_hoffmanni
ENSAPEG00000012996	rbm28	51	51.259	ENSCPBG00000018088	RBM28	76	52.217	Chrysemys_picta_bellii
ENSAPEG00000012996	rbm28	85	52.101	ENSCANG00000038397	RBM28	73	62.621	Colobus_angolensis_palliatus
ENSAPEG00000012996	rbm28	64	54.141	ENSCGRG00001021278	Rbm28	55	55.281	Cricetulus_griseus_chok1gshd
ENSAPEG00000012996	rbm28	64	54.141	ENSCGRG00000005098	Rbm28	57	55.281	Cricetulus_griseus_crigri
ENSAPEG00000012996	rbm28	100	64.653	ENSCSEG00000004212	rbm28	59	72.260	Cynoglossus_semilaevis
ENSAPEG00000012996	rbm28	59	75.556	ENSCVAG00000010493	rbm28	57	76.082	Cyprinodon_variegatus
ENSAPEG00000012996	rbm28	100	56.716	ENSDARG00000025332	rbm28	74	60.045	Danio_rerio
ENSAPEG00000012996	rbm28	100	51.515	ENSDNOG00000001124	RBM28	57	54.382	Dasypus_novemcinctus
ENSAPEG00000012996	rbm28	74	52.138	ENSDORG00000004184	Rbm28	85	55.251	Dipodomys_ordii
ENSAPEG00000012996	rbm28	56	51.878	ENSETEG00000007130	RBM28	56	51.878	Echinops_telfairi
ENSAPEG00000012996	rbm28	83	44.843	ENSEBUG00000004419	rbm28	88	43.719	Eptatretus_burgeri
ENSAPEG00000012996	rbm28	64	54.065	ENSEASG00005008528	RBM28	56	55.329	Equus_asinus_asinus
ENSAPEG00000012996	rbm28	64	53.659	ENSECAG00000007745	RBM28	56	55.000	Equus_caballus
ENSAPEG00000012996	rbm28	100	47.810	ENSEEUG00000002389	RBM28	57	51.126	Erinaceus_europaeus
ENSAPEG00000012996	rbm28	100	58.025	ENSELUG00000020602	rbm28	58	65.646	Esox_lucius
ENSAPEG00000012996	rbm28	100	51.562	ENSFCAG00000000946	RBM28	78	62.500	Felis_catus
ENSAPEG00000012996	rbm28	100	51.094	ENSFDAG00000010169	RBM28	58	54.318	Fukomys_damarensis
ENSAPEG00000012996	rbm28	99	52.100	ENSGMOG00000007091	rbm28	92	63.532	Gadus_morhua
ENSAPEG00000012996	rbm28	59	72.566	ENSGAFG00000004802	rbm28	96	72.727	Gambusia_affinis
ENSAPEG00000012996	rbm28	58	73.874	ENSGACG00000012612	rbm28	73	73.696	Gasterosteus_aculeatus
ENSAPEG00000012996	rbm28	85	53.125	ENSGAGG00000008873	RBM28	89	60.526	Gopherus_agassizii
ENSAPEG00000012996	rbm28	95	50.725	ENSGGOG00000004644	RBM28	58	53.933	Gorilla_gorilla
ENSAPEG00000012996	rbm28	95	73.077	ENSHBUG00000009611	rbm28	55	77.000	Haplochromis_burtoni
ENSAPEG00000012996	rbm28	100	51.213	ENSHGLG00000005409	RBM28	58	53.394	Heterocephalus_glaber_female
ENSAPEG00000012996	rbm28	100	51.213	ENSHGLG00100016458	RBM28	58	53.394	Heterocephalus_glaber_male
ENSAPEG00000012996	rbm28	82	57.368	ENSHCOG00000010597	rbm28	91	55.204	Hippocampus_comes
ENSAPEG00000012996	rbm28	61	46.895	ENSIPUG00000007103	rbm28	81	49.188	Ictalurus_punctatus
ENSAPEG00000012996	rbm28	100	50.191	ENSSTOG00000002169	RBM28	56	54.795	Ictidomys_tridecemlineatus
ENSAPEG00000012996	rbm28	79	59.669	ENSJJAG00000022400	Rbm28	90	52.262	Jaculus_jaculus
ENSAPEG00000012996	rbm28	58	74.388	ENSKMAG00000013348	rbm28	57	74.318	Kryptolebias_marmoratus
ENSAPEG00000012996	rbm28	59	73.614	ENSLBEG00000012998	rbm28	56	73.636	Labrus_bergylta
ENSAPEG00000012996	rbm28	100	60.825	ENSLOCG00000015541	rbm28	75	62.472	Lepisosteus_oculatus
ENSAPEG00000012996	rbm28	100	51.484	ENSLAFG00000010717	RBM28	57	55.682	Loxodonta_africana
ENSAPEG00000012996	rbm28	100	50.877	ENSMFAG00000031036	RBM28	76	62.500	Macaca_fascicularis
ENSAPEG00000012996	rbm28	100	50.814	ENSMMUG00000007250	RBM28	76	62.500	Macaca_mulatta
ENSAPEG00000012996	rbm28	100	51.396	ENSMNEG00000036970	RBM28	75	62.500	Macaca_nemestrina
ENSAPEG00000012996	rbm28	91	51.313	ENSMLEG00000037717	RBM28	62	57.143	Mandrillus_leucophaeus
ENSAPEG00000012996	rbm28	100	72.952	ENSMAMG00000008525	rbm28	100	71.782	Mastacembelus_armatus
ENSAPEG00000012996	rbm28	93	72.486	ENSMZEG00005019625	rbm28	62	76.298	Maylandia_zebra
ENSAPEG00000012996	rbm28	64	53.893	ENSMAUG00000002263	Rbm28	55	56.164	Mesocricetus_auratus
ENSAPEG00000012996	rbm28	93	49.137	ENSMICG00000000107	RBM28	60	54.422	Microcebus_murinus
ENSAPEG00000012996	rbm28	100	51.232	ENSMOCG00000014615	Rbm28	58	54.730	Microtus_ochrogaster
ENSAPEG00000012996	rbm28	58	67.040	ENSMMOG00000008600	rbm28	89	65.982	Mola_mola
ENSAPEG00000012996	rbm28	100	71.059	ENSMALG00000006419	rbm28	100	71.189	Monopterus_albus
ENSAPEG00000012996	rbm28	100	50.653	MGP_CAROLIEiJ_G0028162	Rbm28	57	55.251	Mus_caroli
ENSAPEG00000012996	rbm28	100	51.804	ENSMUSG00000029701	Rbm28	58	55.708	Mus_musculus
ENSAPEG00000012996	rbm28	100	51.886	MGP_PahariEiJ_G0021920	Rbm28	57	55.479	Mus_pahari
ENSAPEG00000012996	rbm28	100	51.418	MGP_SPRETEiJ_G0029162	Rbm28	58	55.251	Mus_spretus
ENSAPEG00000012996	rbm28	64	54.675	ENSMPUG00000006511	RBM28	57	55.556	Mustela_putorius_furo
ENSAPEG00000012996	rbm28	64	53.550	ENSMLUG00000002186	RBM28	57	53.846	Myotis_lucifugus
ENSAPEG00000012996	rbm28	100	50.775	ENSNGAG00000017946	-	57	52.097	Nannospalax_galili
ENSAPEG00000012996	rbm28	100	51.625	ENSNGAG00000006480	-	58	52.193	Nannospalax_galili
ENSAPEG00000012996	rbm28	100	51.317	ENSNLEG00000012307	RBM28	76	62.500	Nomascus_leucogenys
ENSAPEG00000012996	rbm28	81	62.346	ENSMEUG00000009611	RBM28	82	62.346	Notamacropus_eugenii
ENSAPEG00000012996	rbm28	72	57.143	ENSODEG00000013217	-	77	57.064	Octodon_degus
ENSAPEG00000012996	rbm28	100	49.086	ENSODEG00000003213	-	56	50.797	Octodon_degus
ENSAPEG00000012996	rbm28	100	73.393	ENSONIG00000014924	rbm28	57	76.524	Oreochromis_niloticus
ENSAPEG00000012996	rbm28	100	47.619	ENSOANG00000000815	-	58	49.888	Ornithorhynchus_anatinus
ENSAPEG00000012996	rbm28	100	50.185	ENSOCUG00000003009	RBM28	56	55.088	Oryctolagus_cuniculus
ENSAPEG00000012996	rbm28	99	69.311	ENSORLG00000009636	rbm28	57	74.091	Oryzias_latipes
ENSAPEG00000012996	rbm28	59	74.779	ENSORLG00020002123	rbm28	60	74.318	Oryzias_latipes_hni
ENSAPEG00000012996	rbm28	85	78.922	ENSORLG00015015030	rbm28	96	76.961	Oryzias_latipes_hsok
ENSAPEG00000012996	rbm28	59	75.991	ENSOMEG00000007801	rbm28	58	76.072	Oryzias_melastigma
ENSAPEG00000012996	rbm28	89	53.036	ENSOGAG00000006011	RBM28	93	53.741	Otolemur_garnettii
ENSAPEG00000012996	rbm28	100	51.440	ENSOARG00000002547	RBM28	57	55.023	Ovis_aries
ENSAPEG00000012996	rbm28	100	51.253	ENSPPAG00000041730	RBM28	76	62.500	Pan_paniscus
ENSAPEG00000012996	rbm28	100	50.701	ENSPPRG00000004420	RBM28	78	62.500	Panthera_pardus
ENSAPEG00000012996	rbm28	100	50.955	ENSPTIG00000008550	RBM28	78	62.500	Panthera_tigris_altaica
ENSAPEG00000012996	rbm28	100	51.186	ENSPTRG00000019659	RBM28	76	62.500	Pan_troglodytes
ENSAPEG00000012996	rbm28	100	50.563	ENSPANG00000022295	RBM28	76	62.500	Papio_anubis
ENSAPEG00000012996	rbm28	99	56.522	ENSPKIG00000023453	rbm28	61	58.664	Paramormyrops_kingsleyae
ENSAPEG00000012996	rbm28	83	73.399	ENSPMGG00000012840	rbm28	95	69.264	Periophthalmus_magnuspinnatus
ENSAPEG00000012996	rbm28	100	50.973	ENSPCIG00000012810	RBM28	58	52.116	Phascolarctos_cinereus
ENSAPEG00000012996	rbm28	100	66.406	ENSPFOG00000018209	rbm28	57	72.955	Poecilia_formosa
ENSAPEG00000012996	rbm28	99	66.317	ENSPLAG00000016078	rbm28	55	72.414	Poecilia_latipinna
ENSAPEG00000012996	rbm28	100	66.320	ENSPMEG00000004292	rbm28	57	72.789	Poecilia_mexicana
ENSAPEG00000012996	rbm28	99	65.793	ENSPREG00000014287	rbm28	73	72.311	Poecilia_reticulata
ENSAPEG00000012996	rbm28	100	51.443	ENSPPYG00000017975	RBM28	57	53.933	Pongo_abelii
ENSAPEG00000012996	rbm28	73	50.696	ENSPCAG00000008223	RBM28	82	50.420	Procavia_capensis
ENSAPEG00000012996	rbm28	79	62.500	ENSPCOG00000016797	RBM28	75	62.500	Propithecus_coquereli
ENSAPEG00000012996	rbm28	70	61.111	ENSPVAG00000005443	RBM28	67	63.212	Pteropus_vampyrus
ENSAPEG00000012996	rbm28	100	73.212	ENSPNYG00000014003	rbm28	58	76.072	Pundamilia_nyererei
ENSAPEG00000012996	rbm28	100	51.693	ENSRNOG00000005468	Rbm28	84	60.190	Rattus_norvegicus
ENSAPEG00000012996	rbm28	100	50.685	ENSRBIG00000033990	RBM28	76	62.500	Rhinopithecus_bieti
ENSAPEG00000012996	rbm28	100	50.939	ENSRROG00000040747	RBM28	76	62.500	Rhinopithecus_roxellana
ENSAPEG00000012996	rbm28	91	47.165	ENSSBOG00000012308	RBM28	76	57.269	Saimiri_boliviensis_boliviensis
ENSAPEG00000012996	rbm28	96	49.733	ENSSHAG00000017017	RBM28	58	54.545	Sarcophilus_harrisii
ENSAPEG00000012996	rbm28	100	56.641	ENSSFOG00015001231	rbm28	59	62.896	Scleropages_formosus
ENSAPEG00000012996	rbm28	67	65.820	ENSSMAG00000003885	rbm28	88	67.347	Scophthalmus_maximus
ENSAPEG00000012996	rbm28	59	82.561	ENSSDUG00000014270	rbm28	86	82.579	Seriola_dumerili
ENSAPEG00000012996	rbm28	100	73.419	ENSSLDG00000020099	rbm28	100	73.677	Seriola_lalandi_dorsalis
ENSAPEG00000012996	rbm28	75	58.701	ENSSARG00000008303	RBM28	75	58.904	Sorex_araneus
ENSAPEG00000012996	rbm28	70	51.613	ENSSPUG00000000838	RBM28	77	64.706	Sphenodon_punctatus
ENSAPEG00000012996	rbm28	58	85.779	ENSSPAG00000023305	rbm28	100	80.357	Stegastes_partitus
ENSAPEG00000012996	rbm28	100	51.842	ENSSSCG00000031847	RBM28	57	54.751	Sus_scrofa
ENSAPEG00000012996	rbm28	100	62.051	ENSTRUG00000013311	rbm28	57	66.966	Takifugu_rubripes
ENSAPEG00000012996	rbm28	99	60.674	ENSTNIG00000017962	rbm28	58	67.494	Tetraodon_nigroviridis
ENSAPEG00000012996	rbm28	81	54.658	ENSTBEG00000012749	RBM28	70	54.430	Tupaia_belangeri
ENSAPEG00000012996	rbm28	63	53.265	ENSTTRG00000013647	RBM28	57	53.795	Tursiops_truncatus
ENSAPEG00000012996	rbm28	100	49.288	ENSUAMG00000006949	RBM28	88	56.017	Ursus_americanus
ENSAPEG00000012996	rbm28	64	54.582	ENSUMAG00000005997	RBM28	57	56.136	Ursus_maritimus
ENSAPEG00000012996	rbm28	85	48.444	ENSVPAG00000008304	RBM28	74	62.602	Vicugna_pacos
ENSAPEG00000012996	rbm28	100	51.410	ENSVVUG00000007270	RBM28	57	55.782	Vulpes_vulpes
ENSAPEG00000012996	rbm28	99	47.539	ENSXETG00000009271	rbm28	57	50.327	Xenopus_tropicalis
ENSAPEG00000012996	rbm28	59	68.151	ENSXCOG00000020357	rbm28	90	68.337	Xiphophorus_couchianus
ENSAPEG00000012996	rbm28	58	72.135	ENSXMAG00000004415	rbm28	57	72.581	Xiphophorus_maculatus