EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000013086 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 10056 bases
Position: chr8:1208918-1218973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018335	RRM_1	PF00076.22	5.7e-32	1	2
ENSAPEP00000018335	RRM_1	PF00076.22	5.7e-32	2	2
ENSAPEP00000018298	RRM_1	PF00076.22	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018843	-	1047	-	ENSAPEP00000018335	348 (aa)	-	-
ENSAPET00000018806	-	2368	-	ENSAPEP00000018298	245 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000013086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000013086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000013086	-	55	38.049	ENSAPEG00000011908	srsf9	77	39.512
ENSAPEG00000013086	-	55	83.163	ENSAPEG00000020746	-	65	83.684
ENSAPEG00000013086	-	52	64.444	ENSAPEG00000007830	srsf5b	62	64.444
ENSAPEG00000013086	-	52	64.088	ENSAPEG00000009297	srsf5a	83	49.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000013086	-	53	88.172	ENSG00000124193	SRSF6	98	61.871	Homo_sapiens
ENSAPEG00000013086	-	91	89.640	ENSAPOG00000000810	srsf6a	92	91.031	Acanthochromis_polyacanthus
ENSAPEG00000013086	-	53	71.123	ENSAMEG00000003710	SRSF6	53	72.043	Ailuropoda_melanoleuca
ENSAPEG00000013086	-	68	74.790	ENSACIG00000020091	-	95	83.721	Amphilophus_citrinellus
ENSAPEG00000013086	-	99	80.516	ENSACIG00000023658	-	81	93.370	Amphilophus_citrinellus
ENSAPEG00000013086	-	100	97.551	ENSAOCG00000019410	-	100	97.551	Amphiprion_ocellaris
ENSAPEG00000013086	-	53	87.568	ENSAOCG00000004309	-	57	87.568	Amphiprion_ocellaris
ENSAPEG00000013086	-	53	85.870	ENSATEG00000007255	-	71	82.609	Anabas_testudineus
ENSAPEG00000013086	-	53	88.649	ENSACAG00000002061	SRSF6	52	88.649	Anolis_carolinensis
ENSAPEG00000013086	-	53	88.172	ENSANAG00000024080	SRSF6	98	61.871	Aotus_nancymaae
ENSAPEG00000013086	-	91	55.605	ENSAMXG00000042692	-	96	88.889	Astyanax_mexicanus
ENSAPEG00000013086	-	53	88.172	ENSBTAG00000008527	SRSF6	98	62.590	Bos_taurus
ENSAPEG00000013086	-	53	88.172	ENSCJAG00000048403	SRSF6	98	61.871	Callithrix_jacchus
ENSAPEG00000013086	-	53	88.172	ENSCAFG00000009289	SRSF6	98	62.590	Canis_familiaris
ENSAPEG00000013086	-	53	88.172	ENSCAFG00020013559	SRSF6	98	62.590	Canis_lupus_dingo
ENSAPEG00000013086	-	53	88.172	ENSCHIG00000015890	-	98	62.590	Capra_hircus
ENSAPEG00000013086	-	53	87.097	ENSCHIG00000009148	-	53	87.568	Capra_hircus
ENSAPEG00000013086	-	53	82.796	ENSCPOG00000011761	SRSF6	98	61.871	Cavia_porcellus
ENSAPEG00000013086	-	53	88.172	ENSCCAG00000026018	-	98	61.871	Cebus_capucinus
ENSAPEG00000013086	-	66	65.948	ENSCCAG00000018540	-	60	76.882	Cebus_capucinus
ENSAPEG00000013086	-	53	88.172	ENSCATG00000030794	SRSF6	98	61.871	Cercocebus_atys
ENSAPEG00000013086	-	53	88.172	ENSCLAG00000010247	SRSF6	98	61.871	Chinchilla_lanigera
ENSAPEG00000013086	-	53	88.172	ENSCSAG00000014022	SRSF6	53	88.649	Chlorocebus_sabaeus
ENSAPEG00000013086	-	53	87.701	ENSCPBG00000018200	SRSF6	54	89.785	Chrysemys_picta_bellii
ENSAPEG00000013086	-	53	87.097	ENSCANG00000037774	-	53	87.568	Colobus_angolensis_palliatus
ENSAPEG00000013086	-	53	88.172	ENSCGRG00001022339	Srsf6	98	61.871	Cricetulus_griseus_chok1gshd
ENSAPEG00000013086	-	53	88.770	ENSDARG00000016783	srsf6b	82	93.590	Danio_rerio
ENSAPEG00000013086	-	53	88.172	ENSDORG00000028378	Srsf6	98	61.871	Dipodomys_ordii
ENSAPEG00000013086	-	53	84.409	ENSETEG00000006221	SRSF6	53	84.865	Echinops_telfairi
ENSAPEG00000013086	-	53	88.172	ENSEASG00005023429	SRSF6	53	88.649	Equus_asinus_asinus
ENSAPEG00000013086	-	53	88.172	ENSECAG00000023932	SRSF6	56	88.649	Equus_caballus
ENSAPEG00000013086	-	53	87.634	ENSELUG00000024182	SRSF6	90	87.805	Esox_lucius
ENSAPEG00000013086	-	53	88.525	ENSELUG00000013506	SRSF6	82	89.130	Esox_lucius
ENSAPEG00000013086	-	53	88.172	ENSFCAG00000032814	SRSF6	53	88.649	Felis_catus
ENSAPEG00000013086	-	94	81.459	ENSFHEG00000023065	srsf6a	91	63.182	Fundulus_heteroclitus
ENSAPEG00000013086	-	52	75.138	ENSGMOG00000006105	srsf6a	62	74.033	Gadus_morhua
ENSAPEG00000013086	-	53	88.235	ENSGALG00000000990	SRSF6	98	59.441	Gallus_gallus
ENSAPEG00000013086	-	93	73.352	ENSGACG00000006084	srsf6a	93	74.545	Gasterosteus_aculeatus
ENSAPEG00000013086	-	53	87.701	ENSGAGG00000003238	SRSF6	54	89.785	Gopherus_agassizii
ENSAPEG00000013086	-	53	88.172	ENSGGOG00000009808	SRSF6	98	61.871	Gorilla_gorilla
ENSAPEG00000013086	-	61	74.678	ENSHBUG00000006386	-	57	87.027	Haplochromis_burtoni
ENSAPEG00000013086	-	53	88.172	ENSHGLG00000007348	SRSF6	98	61.871	Heterocephalus_glaber_female
ENSAPEG00000013086	-	55	68.718	ENSHGLG00000007701	-	57	68.108	Heterocephalus_glaber_female
ENSAPEG00000013086	-	88	55.814	ENSHCOG00000002740	srsf6a	94	73.620	Hippocampus_comes
ENSAPEG00000013086	-	53	87.634	ENSIPUG00000004776	-	92	63.063	Ictalurus_punctatus
ENSAPEG00000013086	-	53	88.172	ENSSTOG00000010866	SRSF6	98	61.871	Ictidomys_tridecemlineatus
ENSAPEG00000013086	-	94	74.847	ENSKMAG00000011934	srsf6a	91	82.063	Kryptolebias_marmoratus
ENSAPEG00000013086	-	89	63.182	ENSLBEG00000007356	srsf6a	95	71.554	Labrus_bergylta
ENSAPEG00000013086	-	91	71.787	ENSLACG00000005466	SRSF6	54	88.649	Latimeria_chalumnae
ENSAPEG00000013086	-	53	88.172	ENSMFAG00000036925	SRSF6	98	61.871	Macaca_fascicularis
ENSAPEG00000013086	-	53	88.172	ENSMMUG00000006742	SRSF6	98	61.871	Macaca_mulatta
ENSAPEG00000013086	-	53	87.634	ENSMNEG00000027392	-	98	61.151	Macaca_nemestrina
ENSAPEG00000013086	-	53	87.634	ENSMNEG00000038270	-	53	88.108	Macaca_nemestrina
ENSAPEG00000013086	-	53	98.378	ENSMAMG00000017161	srsf6a	94	85.933	Mastacembelus_armatus
ENSAPEG00000013086	-	77	69.288	ENSMZEG00005020658	-	60	85.246	Maylandia_zebra
ENSAPEG00000013086	-	61	72.458	ENSMZEG00005008032	-	57	87.027	Maylandia_zebra
ENSAPEG00000013086	-	53	87.634	ENSMICG00000008537	SRSF6	98	61.871	Microcebus_murinus
ENSAPEG00000013086	-	53	87.097	ENSMODG00000003107	SRSF6	54	88.649	Monodelphis_domestica
ENSAPEG00000013086	-	100	71.212	ENSMALG00000003702	srsf6a	100	71.212	Monopterus_albus
ENSAPEG00000013086	-	53	88.172	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.871	Mus_caroli
ENSAPEG00000013086	-	53	88.172	ENSMUSG00000016921	Srsf6	98	61.871	Mus_musculus
ENSAPEG00000013086	-	53	88.172	MGP_PahariEiJ_G0026050	Srsf6	98	61.871	Mus_pahari
ENSAPEG00000013086	-	53	88.172	MGP_SPRETEiJ_G0025528	Srsf6	98	61.871	Mus_spretus
ENSAPEG00000013086	-	53	88.172	ENSMPUG00000017692	SRSF6	64	88.649	Mustela_putorius_furo
ENSAPEG00000013086	-	53	59.624	ENSMLUG00000016618	SRSF6	53	58.294	Myotis_lucifugus
ENSAPEG00000013086	-	53	88.172	ENSNGAG00000017560	Srsf6	98	61.871	Nannospalax_galili
ENSAPEG00000013086	-	53	84.865	ENSNBRG00000014709	-	57	87.027	Neolamprologus_brichardi
ENSAPEG00000013086	-	78	97.268	ENSNBRG00000001846	-	91	86.810	Neolamprologus_brichardi
ENSAPEG00000013086	-	53	88.172	ENSNLEG00000006524	SRSF6	98	61.871	Nomascus_leucogenys
ENSAPEG00000013086	-	53	87.097	ENSMEUG00000014615	SRSF6	61	88.649	Notamacropus_eugenii
ENSAPEG00000013086	-	93	77.982	ENSONIG00000001925	-	88	85.890	Oreochromis_niloticus
ENSAPEG00000013086	-	53	86.486	ENSONIG00000020247	-	53	85.405	Oreochromis_niloticus
ENSAPEG00000013086	-	52	53.591	ENSOCUG00000023999	-	70	53.591	Oryctolagus_cuniculus
ENSAPEG00000013086	-	53	69.744	ENSOCUG00000009785	-	63	69.271	Oryctolagus_cuniculus
ENSAPEG00000013086	-	53	75.269	ENSOMEG00000006001	srsf6a	64	66.816	Oryzias_melastigma
ENSAPEG00000013086	-	53	87.634	ENSOGAG00000014468	SRSF6	53	88.108	Otolemur_garnettii
ENSAPEG00000013086	-	53	81.250	ENSOARG00000003117	SRSF6	53	84.865	Ovis_aries
ENSAPEG00000013086	-	53	73.118	ENSPPAG00000043131	-	57	73.016	Pan_paniscus
ENSAPEG00000013086	-	53	87.634	ENSPPAG00000034327	-	53	88.108	Pan_paniscus
ENSAPEG00000013086	-	53	88.172	ENSPPRG00000008917	SRSF6	53	88.649	Panthera_pardus
ENSAPEG00000013086	-	53	73.118	ENSPTRG00000046274	-	57	73.016	Pan_troglodytes
ENSAPEG00000013086	-	53	88.172	ENSPTRG00000044686	-	98	61.871	Pan_troglodytes
ENSAPEG00000013086	-	53	88.172	ENSPANG00000035224	SRSF6	98	61.871	Papio_anubis
ENSAPEG00000013086	-	91	94.444	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSAPEG00000013086	-	52	73.370	ENSPKIG00000015703	-	95	60.927	Paramormyrops_kingsleyae
ENSAPEG00000013086	-	94	76.946	ENSPMGG00000014963	srsf6a	55	97.297	Periophthalmus_magnuspinnatus
ENSAPEG00000013086	-	53	87.097	ENSPCIG00000003820	SRSF6	98	61.871	Phascolarctos_cinereus
ENSAPEG00000013086	-	91	98.148	ENSPFOG00000006437	srsf6a	71	79.913	Poecilia_formosa
ENSAPEG00000013086	-	94	74.074	ENSPLAG00000009243	srsf6a	79	94.444	Poecilia_latipinna
ENSAPEG00000013086	-	53	93.514	ENSPMEG00000006042	SRSF6	94	84.940	Poecilia_mexicana
ENSAPEG00000013086	-	53	88.172	ENSPPYG00000011019	SRSF6	53	88.649	Pongo_abelii
ENSAPEG00000013086	-	53	86.559	ENSPCAG00000010954	SRSF6	55	87.027	Procavia_capensis
ENSAPEG00000013086	-	53	87.634	ENSPCOG00000026364	SRSF6	98	61.871	Propithecus_coquereli
ENSAPEG00000013086	-	53	87.634	ENSPVAG00000015232	SRSF6	53	88.587	Pteropus_vampyrus
ENSAPEG00000013086	-	53	84.865	ENSPNYG00000004944	-	57	87.027	Pundamilia_nyererei
ENSAPEG00000013086	-	53	97.268	ENSPNYG00000011272	-	51	97.297	Pundamilia_nyererei
ENSAPEG00000013086	-	53	88.172	ENSRNOG00000006380	Srsf6	54	88.649	Rattus_norvegicus
ENSAPEG00000013086	-	53	87.097	ENSRBIG00000041414	SRSF6	98	61.151	Rhinopithecus_bieti
ENSAPEG00000013086	-	53	88.172	ENSRROG00000029989	SRSF6	98	61.871	Rhinopithecus_roxellana
ENSAPEG00000013086	-	53	88.172	ENSSBOG00000033708	-	98	61.871	Saimiri_boliviensis_boliviensis
ENSAPEG00000013086	-	53	72.283	ENSSBOG00000034078	-	54	70.492	Saimiri_boliviensis_boliviensis
ENSAPEG00000013086	-	53	87.097	ENSSHAG00000012805	SRSF6	54	88.649	Sarcophilus_harrisii
ENSAPEG00000013086	-	94	72.093	ENSSFOG00015019681	-	53	87.047	Scleropages_formosus
ENSAPEG00000013086	-	53	92.350	ENSSFOG00015015169	SRSF6	59	93.514	Scleropages_formosus
ENSAPEG00000013086	-	91	58.296	ENSSMAG00000014819	-	88	75.105	Scophthalmus_maximus
ENSAPEG00000013086	-	53	82.609	ENSSMAG00000017447	-	55	83.152	Scophthalmus_maximus
ENSAPEG00000013086	-	53	98.378	ENSSDUG00000016097	srsf6a	94	85.321	Seriola_dumerili
ENSAPEG00000013086	-	91	75.785	ENSSLDG00000022841	srsf6a	94	85.321	Seriola_lalandi_dorsalis
ENSAPEG00000013086	-	53	89.730	ENSSPUG00000004967	SRSF6	98	59.441	Sphenodon_punctatus
ENSAPEG00000013086	-	93	90.741	ENSSPAG00000002362	srsf6a	86	96.277	Stegastes_partitus
ENSAPEG00000013086	-	53	88.172	ENSSSCG00000007362	SRSF6	61	88.649	Sus_scrofa
ENSAPEG00000013086	-	53	88.649	ENSTGUG00000003455	SRSF6	53	89.189	Taeniopygia_guttata
ENSAPEG00000013086	-	53	88.172	ENSUAMG00000003559	SRSF6	98	62.590	Ursus_americanus
ENSAPEG00000013086	-	91	55.459	ENSXMAG00000021849	srsf6a	93	76.506	Xiphophorus_maculatus