EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000013137 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 29403 bases
Position: chr8:12507706-12537108
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018426	RRM_1	PF00076.22	3.5e-16	1	1
ENSAPEP00000018397	RRM_1	PF00076.22	3.8e-16	1	1
ENSAPEP00000018405	RRM_1	PF00076.22	5.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000018913	-	2904	-	ENSAPEP00000018405	310 (aa)	-	-
ENSAPET00000018935	-	699	-	ENSAPEP00000018426	232 (aa)	-	-
ENSAPET00000018905	-	3059	-	ENSAPEP00000018397	249 (aa)	-	UPI000C30F6BA

Gene Model

Click here to download ENSAPEG00000013137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000013137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000013137	rbm38	98	64.683	ENSAPEG00000023581	-	100	65.079
ENSAPEG00000013137	rbm38	78	30.693	ENSAPEG00000003245	MSI1	80	30.808
ENSAPEG00000013137	rbm38	58	74.815	ENSAPEG00000012234	rbm24a	100	58.974
ENSAPEG00000013137	rbm38	58	34.483	ENSAPEG00000005289	dazap1	78	34.483
ENSAPEG00000013137	rbm38	67	69.375	ENSAPEG00000010059	rbm24b	100	58.577

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000013137	rbm38	99	58.943	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSAPEG00000013137	rbm38	100	99.598	ENSAPOG00000003301	rbm38	100	99.598	Acanthochromis_polyacanthus
ENSAPEG00000013137	rbm38	98	65.476	ENSAPOG00000009939	-	95	72.350	Acanthochromis_polyacanthus
ENSAPEG00000013137	rbm38	100	94.400	ENSACIG00000000010	rbm38	100	94.400	Amphilophus_citrinellus
ENSAPEG00000013137	rbm38	98	64.940	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSAPEG00000013137	rbm38	99	68.085	ENSAOCG00000012559	RBM38	98	68.085	Amphiprion_ocellaris
ENSAPEG00000013137	rbm38	100	100.000	ENSAOCG00000013497	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000013137	rbm38	100	92.000	ENSATEG00000016366	rbm38	100	92.000	Anabas_testudineus
ENSAPEG00000013137	rbm38	98	65.339	ENSATEG00000016710	-	100	65.354	Anabas_testudineus
ENSAPEG00000013137	rbm38	93	58.650	ENSACAG00000016238	RBM38	99	57.317	Anolis_carolinensis
ENSAPEG00000013137	rbm38	93	59.072	ENSANAG00000031959	RBM38	99	76.423	Aotus_nancymaae
ENSAPEG00000013137	rbm38	98	64.567	ENSACLG00000019514	-	100	64.567	Astatotilapia_calliptera
ENSAPEG00000013137	rbm38	98	61.044	ENSAMXG00000015601	-	100	61.446	Astyanax_mexicanus
ENSAPEG00000013137	rbm38	95	56.540	ENSAMXG00000038120	rbm38	96	56.540	Astyanax_mexicanus
ENSAPEG00000013137	rbm38	99	60.656	ENSBTAG00000008105	RBM38	99	60.656	Bos_taurus
ENSAPEG00000013137	rbm38	63	59.310	WBGene00006321	sup-12	77	63.780	Caenorhabditis_elegans
ENSAPEG00000013137	rbm38	99	59.836	ENSCJAG00000019139	RBM38	99	76.423	Callithrix_jacchus
ENSAPEG00000013137	rbm38	99	60.656	ENSCAFG00020021943	RBM38	99	60.656	Canis_lupus_dingo
ENSAPEG00000013137	rbm38	99	59.426	ENSCHIG00000002609	RBM38	99	59.426	Capra_hircus
ENSAPEG00000013137	rbm38	99	61.066	ENSCPOG00000012781	RBM38	99	61.066	Cavia_porcellus
ENSAPEG00000013137	rbm38	99	59.836	ENSCCAG00000036872	RBM38	99	76.423	Cebus_capucinus
ENSAPEG00000013137	rbm38	99	60.331	ENSCATG00000032133	RBM38	99	76.423	Cercocebus_atys
ENSAPEG00000013137	rbm38	93	59.072	ENSCLAG00000005906	RBM38	92	63.721	Chinchilla_lanigera
ENSAPEG00000013137	rbm38	99	60.331	ENSCSAG00000015503	RBM38	99	60.331	Chlorocebus_sabaeus
ENSAPEG00000013137	rbm38	93	59.244	ENSCPBG00000024059	RBM38	100	61.883	Chrysemys_picta_bellii
ENSAPEG00000013137	rbm38	64	62.893	ENSCING00000025102	-	66	62.893	Ciona_intestinalis
ENSAPEG00000013137	rbm38	66	60.127	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSAPEG00000013137	rbm38	99	47.917	ENSCANG00000030105	-	89	47.917	Colobus_angolensis_palliatus
ENSAPEG00000013137	rbm38	88	60.930	ENSCGRG00001012928	Rbm38	89	62.326	Cricetulus_griseus_chok1gshd
ENSAPEG00000013137	rbm38	84	71.649	ENSCSEG00000020943	rbm38	68	69.856	Cynoglossus_semilaevis
ENSAPEG00000013137	rbm38	98	64.542	ENSCSEG00000004701	-	100	64.567	Cynoglossus_semilaevis
ENSAPEG00000013137	rbm38	98	64.542	ENSCVAG00000005472	-	100	65.737	Cyprinodon_variegatus
ENSAPEG00000013137	rbm38	100	88.000	ENSCVAG00000015952	rbm38	100	88.000	Cyprinodon_variegatus
ENSAPEG00000013137	rbm38	98	65.587	ENSDARG00000058818	rbm38	100	65.587	Danio_rerio
ENSAPEG00000013137	rbm38	93	57.384	ENSDNOG00000032004	RBM38	98	62.381	Dasypus_novemcinctus
ENSAPEG00000013137	rbm38	99	59.836	ENSECAG00000007700	RBM38	99	59.836	Equus_caballus
ENSAPEG00000013137	rbm38	99	58.436	ENSEEUG00000013489	RBM38	99	59.259	Erinaceus_europaeus
ENSAPEG00000013137	rbm38	98	65.490	ENSELUG00000005849	-	100	65.490	Esox_lucius
ENSAPEG00000013137	rbm38	92	73.913	ENSELUG00000000585	-	100	73.913	Esox_lucius
ENSAPEG00000013137	rbm38	99	59.426	ENSFCAG00000042916	RBM38	98	76.230	Felis_catus
ENSAPEG00000013137	rbm38	75	69.492	ENSFALG00000010805	RBM38	90	69.492	Ficedula_albicollis
ENSAPEG00000013137	rbm38	100	88.446	ENSFHEG00000017748	rbm38	100	88.446	Fundulus_heteroclitus
ENSAPEG00000013137	rbm38	91	69.124	ENSFHEG00000006160	-	96	69.124	Fundulus_heteroclitus
ENSAPEG00000013137	rbm38	81	70.681	ENSGMOG00000016655	-	100	73.298	Gadus_morhua
ENSAPEG00000013137	rbm38	93	58.403	ENSGALG00000026081	RBM38	100	61.261	Gallus_gallus
ENSAPEG00000013137	rbm38	90	66.818	ENSGACG00000009873	-	100	66.818	Gasterosteus_aculeatus
ENSAPEG00000013137	rbm38	90	87.204	ENSGACG00000015224	rbm38	100	87.204	Gasterosteus_aculeatus
ENSAPEG00000013137	rbm38	93	59.244	ENSGAGG00000001187	RBM38	100	61.883	Gopherus_agassizii
ENSAPEG00000013137	rbm38	100	94.400	ENSHBUG00000012058	rbm38	100	94.400	Haplochromis_burtoni
ENSAPEG00000013137	rbm38	98	64.567	ENSHBUG00000011778	-	96	68.750	Haplochromis_burtoni
ENSAPEG00000013137	rbm38	99	59.836	ENSHGLG00000015077	RBM38	99	59.836	Heterocephalus_glaber_female
ENSAPEG00000013137	rbm38	85	68.421	ENSHCOG00000005622	-	59	69.378	Hippocampus_comes
ENSAPEG00000013137	rbm38	100	64.542	ENSHCOG00000019040	rbm38	100	64.542	Hippocampus_comes
ENSAPEG00000013137	rbm38	98	60.241	ENSIPUG00000019349	-	100	60.241	Ictalurus_punctatus
ENSAPEG00000013137	rbm38	91	76.923	ENSKMAG00000012402	rbm38	99	76.923	Kryptolebias_marmoratus
ENSAPEG00000013137	rbm38	98	64.800	ENSLBEG00000016163	RBM38	100	65.234	Labrus_bergylta
ENSAPEG00000013137	rbm38	100	92.800	ENSLBEG00000018878	rbm38	100	92.800	Labrus_bergylta
ENSAPEG00000013137	rbm38	98	64.516	ENSLOCG00000003456	rbm38	100	64.516	Lepisosteus_oculatus
ENSAPEG00000013137	rbm38	98	60.669	ENSMFAG00000043808	RBM38	97	77.500	Macaca_fascicularis
ENSAPEG00000013137	rbm38	99	60.331	ENSMMUG00000031391	RBM38	99	76.423	Macaca_mulatta
ENSAPEG00000013137	rbm38	99	60.331	ENSMNEG00000034683	RBM38	99	76.423	Macaca_nemestrina
ENSAPEG00000013137	rbm38	98	67.068	ENSMAMG00000020499	RBM38	100	67.589	Mastacembelus_armatus
ENSAPEG00000013137	rbm38	100	94.800	ENSMAMG00000024135	rbm38	100	94.800	Mastacembelus_armatus
ENSAPEG00000013137	rbm38	100	94.400	ENSMZEG00005026036	rbm38	100	94.400	Maylandia_zebra
ENSAPEG00000013137	rbm38	98	64.567	ENSMZEG00005000849	-	96	68.750	Maylandia_zebra
ENSAPEG00000013137	rbm38	88	61.860	ENSMAUG00000021211	Rbm38	89	63.256	Mesocricetus_auratus
ENSAPEG00000013137	rbm38	93	58.723	ENSMICG00000038011	RBM38	98	63.256	Microcebus_murinus
ENSAPEG00000013137	rbm38	88	61.860	ENSMOCG00000008715	Rbm38	89	63.256	Microtus_ochrogaster
ENSAPEG00000013137	rbm38	92	71.101	ENSMMOG00000020051	-	95	71.101	Mola_mola
ENSAPEG00000013137	rbm38	99	57.787	ENSMODG00000016458	RBM38	99	57.787	Monodelphis_domestica
ENSAPEG00000013137	rbm38	81	75.263	ENSMALG00000004680	RBM38	84	67.556	Monopterus_albus
ENSAPEG00000013137	rbm38	100	76.400	ENSMALG00000022327	rbm38	100	77.200	Monopterus_albus
ENSAPEG00000013137	rbm38	88	62.791	MGP_CAROLIEiJ_G0024745	Rbm38	89	62.791	Mus_caroli
ENSAPEG00000013137	rbm38	88	62.791	ENSMUSG00000027510	Rbm38	89	62.791	Mus_musculus
ENSAPEG00000013137	rbm38	88	62.791	MGP_PahariEiJ_G0026186	Rbm38	89	62.791	Mus_pahari
ENSAPEG00000013137	rbm38	88	62.791	MGP_SPRETEiJ_G0025665	Rbm38	89	62.791	Mus_spretus
ENSAPEG00000013137	rbm38	80	65.426	ENSMPUG00000006518	RBM38	98	63.415	Mustela_putorius_furo
ENSAPEG00000013137	rbm38	91	58.547	ENSMLUG00000011140	RBM38	98	61.395	Myotis_lucifugus
ENSAPEG00000013137	rbm38	100	94.000	ENSNBRG00000022685	rbm38	100	94.000	Neolamprologus_brichardi
ENSAPEG00000013137	rbm38	98	64.567	ENSNBRG00000022545	-	100	64.567	Neolamprologus_brichardi
ENSAPEG00000013137	rbm38	59	67.391	ENSMEUG00000005475	-	99	67.391	Notamacropus_eugenii
ENSAPEG00000013137	rbm38	99	61.475	ENSODEG00000007980	RBM38	99	61.475	Octodon_degus
ENSAPEG00000013137	rbm38	98	94.694	ENSONIG00000017073	rbm38	100	94.694	Oreochromis_niloticus
ENSAPEG00000013137	rbm38	98	64.427	ENSONIG00000020324	-	100	64.427	Oreochromis_niloticus
ENSAPEG00000013137	rbm38	88	62.150	ENSOANG00000009259	RBM38	81	62.441	Ornithorhynchus_anatinus
ENSAPEG00000013137	rbm38	98	62.846	ENSORLG00000027180	-	100	63.780	Oryzias_latipes
ENSAPEG00000013137	rbm38	100	84.861	ENSORLG00000012154	rbm38	100	84.861	Oryzias_latipes
ENSAPEG00000013137	rbm38	100	62.257	ENSORLG00020020751	-	100	63.780	Oryzias_latipes_hni
ENSAPEG00000013137	rbm38	100	85.657	ENSORLG00020017871	rbm38	100	85.657	Oryzias_latipes_hni
ENSAPEG00000013137	rbm38	98	63.492	ENSORLG00015017040	-	100	64.173	Oryzias_latipes_hsok
ENSAPEG00000013137	rbm38	100	85.657	ENSORLG00015012606	rbm38	100	85.657	Oryzias_latipes_hsok
ENSAPEG00000013137	rbm38	100	85.657	ENSOMEG00000006805	rbm38	100	85.657	Oryzias_melastigma
ENSAPEG00000013137	rbm38	98	63.745	ENSOMEG00000023912	-	100	64.143	Oryzias_melastigma
ENSAPEG00000013137	rbm38	99	60.408	ENSOGAG00000029136	RBM38	99	60.408	Otolemur_garnettii
ENSAPEG00000013137	rbm38	99	59.426	ENSPPRG00000009507	RBM38	98	76.230	Panthera_pardus
ENSAPEG00000013137	rbm38	54	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSAPEG00000013137	rbm38	81	64.583	ENSPTRG00000013661	RBM38	99	75.806	Pan_troglodytes
ENSAPEG00000013137	rbm38	99	60.331	ENSPANG00000020919	-	99	76.423	Papio_anubis
ENSAPEG00000013137	rbm38	95	47.521	ENSPANG00000033127	-	93	50.224	Papio_anubis
ENSAPEG00000013137	rbm38	98	60.643	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSAPEG00000013137	rbm38	98	60.317	ENSPKIG00000025417	rbm38	100	61.905	Paramormyrops_kingsleyae
ENSAPEG00000013137	rbm38	93	57.806	ENSPSIG00000011649	RBM38	92	60.360	Pelodiscus_sinensis
ENSAPEG00000013137	rbm38	98	62.205	ENSPMGG00000017094	-	100	62.205	Periophthalmus_magnuspinnatus
ENSAPEG00000013137	rbm38	100	80.478	ENSPMGG00000011343	rbm38	100	83.267	Periophthalmus_magnuspinnatus
ENSAPEG00000013137	rbm38	99	57.787	ENSPCIG00000013648	RBM38	99	57.787	Phascolarctos_cinereus
ENSAPEG00000013137	rbm38	100	90.157	ENSPFOG00000011658	rbm38	100	90.157	Poecilia_formosa
ENSAPEG00000013137	rbm38	98	63.529	ENSPLAG00000002500	-	100	64.800	Poecilia_latipinna
ENSAPEG00000013137	rbm38	100	89.764	ENSPLAG00000005218	rbm38	100	89.764	Poecilia_latipinna
ENSAPEG00000013137	rbm38	100	89.764	ENSPMEG00000015770	rbm38	100	89.764	Poecilia_mexicana
ENSAPEG00000013137	rbm38	100	89.764	ENSPREG00000007398	rbm38	100	89.764	Poecilia_reticulata
ENSAPEG00000013137	rbm38	99	60.408	ENSPCOG00000026201	RBM38	99	75.806	Propithecus_coquereli
ENSAPEG00000013137	rbm38	99	40.329	ENSPVAG00000006457	RBM38	99	41.564	Pteropus_vampyrus
ENSAPEG00000013137	rbm38	98	64.567	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSAPEG00000013137	rbm38	100	94.000	ENSPNYG00000021373	rbm38	100	94.000	Pundamilia_nyererei
ENSAPEG00000013137	rbm38	85	68.182	ENSPNAG00000010596	rbm38	84	67.488	Pygocentrus_nattereri
ENSAPEG00000013137	rbm38	98	62.651	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSAPEG00000013137	rbm38	91	59.914	ENSRNOG00000006420	Rbm38	89	62.791	Rattus_norvegicus
ENSAPEG00000013137	rbm38	99	51.867	ENSRROG00000036388	-	99	51.867	Rhinopithecus_roxellana
ENSAPEG00000013137	rbm38	93	58.228	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSAPEG00000013137	rbm38	98	58.635	ENSSFOG00015004453	rbm38	100	62.651	Scleropages_formosus
ENSAPEG00000013137	rbm38	98	65.079	ENSSDUG00000021082	RBM38	100	65.490	Seriola_dumerili
ENSAPEG00000013137	rbm38	100	96.000	ENSSDUG00000022611	rbm38	100	96.000	Seriola_dumerili
ENSAPEG00000013137	rbm38	98	65.079	ENSSLDG00000011778	RBM38	100	65.490	Seriola_lalandi_dorsalis
ENSAPEG00000013137	rbm38	100	96.000	ENSSLDG00000010845	rbm38	100	96.000	Seriola_lalandi_dorsalis
ENSAPEG00000013137	rbm38	100	99.200	ENSSPAG00000011113	rbm38	100	99.200	Stegastes_partitus
ENSAPEG00000013137	rbm38	98	65.873	ENSSPAG00000020989	RBM38	95	71.233	Stegastes_partitus
ENSAPEG00000013137	rbm38	99	60.656	ENSSSCG00000007504	RBM38	99	60.656	Sus_scrofa
ENSAPEG00000013137	rbm38	100	85.200	ENSTRUG00000024954	rbm38	100	85.600	Takifugu_rubripes
ENSAPEG00000013137	rbm38	98	63.241	ENSTRUG00000019869	-	100	64.286	Takifugu_rubripes
ENSAPEG00000013137	rbm38	93	66.667	ENSTNIG00000007093	-	100	67.257	Tetraodon_nigroviridis
ENSAPEG00000013137	rbm38	99	59.836	ENSUAMG00000019780	RBM38	99	59.836	Ursus_americanus
ENSAPEG00000013137	rbm38	99	60.656	ENSVVUG00000017246	RBM38	99	60.656	Vulpes_vulpes
ENSAPEG00000013137	rbm38	90	57.965	ENSXETG00000011268	rbm38	99	57.965	Xenopus_tropicalis
ENSAPEG00000013137	rbm38	85	56.338	ENSXCOG00000017324	-	99	54.709	Xiphophorus_couchianus
ENSAPEG00000013137	rbm38	100	91.200	ENSXMAG00000023662	rbm38	100	91.200	Xiphophorus_maculatus