EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000013228 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 35316 bases
Position: chr12:1080735-1116050
Accession: ZDB-GENE-030131-3406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018613	Rif1_N	PF12231.8	4.6e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000019125	-	6363	-	ENSAPEP00000018613	2120 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000013228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000013228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000013228	rif1	67	54.600	ENSG00000080345	RIF1	93	54.511	Homo_sapiens
ENSAPEG00000013228	rif1	99	87.975	ENSAPOG00000011073	rif1	97	87.975	Acanthochromis_polyacanthus
ENSAPEG00000013228	rif1	63	52.489	ENSAMEG00000008461	RIF1	62	54.414	Ailuropoda_melanoleuca
ENSAPEG00000013228	rif1	87	78.571	ENSACIG00000017765	rif1	94	78.571	Amphilophus_citrinellus
ENSAPEG00000013228	rif1	99	97.015	ENSAOCG00000017231	rif1	95	97.015	Amphiprion_ocellaris
ENSAPEG00000013228	rif1	99	75.031	ENSATEG00000022887	rif1	97	76.857	Anabas_testudineus
ENSAPEG00000013228	rif1	54	55.037	ENSAPLG00000007092	RIF1	63	57.748	Anas_platyrhynchos
ENSAPEG00000013228	rif1	61	53.659	ENSACAG00000003714	RIF1	53	53.659	Anolis_carolinensis
ENSAPEG00000013228	rif1	65	56.667	ENSANAG00000024840	RIF1	64	56.667	Aotus_nancymaae
ENSAPEG00000013228	rif1	78	66.538	ENSAMXG00000010910	rif1	74	66.625	Astyanax_mexicanus
ENSAPEG00000013228	rif1	56	57.686	ENSBTAG00000021020	RIF1	63	57.686	Bos_taurus
ENSAPEG00000013228	rif1	64	55.394	ENSCJAG00000003138	RIF1	71	55.394	Callithrix_jacchus
ENSAPEG00000013228	rif1	65	55.216	ENSCAFG00000005670	RIF1	63	55.216	Canis_familiaris
ENSAPEG00000013228	rif1	65	55.442	ENSCAFG00020016401	RIF1	72	55.442	Canis_lupus_dingo
ENSAPEG00000013228	rif1	63	56.298	ENSCHIG00000020327	RIF1	71	56.298	Capra_hircus
ENSAPEG00000013228	rif1	65	50.850	ENSTSYG00000008861	RIF1	62	50.850	Carlito_syrichta
ENSAPEG00000013228	rif1	50	44.404	ENSCAPG00000008957	RIF1	64	44.404	Cavia_aperea
ENSAPEG00000013228	rif1	67	52.659	ENSCPOG00000037898	RIF1	69	53.077	Cavia_porcellus
ENSAPEG00000013228	rif1	65	51.574	ENSCCAG00000024760	RIF1	66	51.636	Cebus_capucinus
ENSAPEG00000013228	rif1	65	54.600	ENSCATG00000033353	RIF1	71	54.600	Cercocebus_atys
ENSAPEG00000013228	rif1	61	55.267	ENSCLAG00000001517	RIF1	68	55.267	Chinchilla_lanigera
ENSAPEG00000013228	rif1	65	54.843	ENSCSAG00000016089	RIF1	71	54.843	Chlorocebus_sabaeus
ENSAPEG00000013228	rif1	57	49.771	ENSCHOG00000007187	RIF1	66	49.771	Choloepus_hoffmanni
ENSAPEG00000013228	rif1	66	55.654	ENSCPBG00000025885	RIF1	70	55.654	Chrysemys_picta_bellii
ENSAPEG00000013228	rif1	65	52.785	ENSCANG00000028962	RIF1	70	54.479	Colobus_angolensis_palliatus
ENSAPEG00000013228	rif1	51	50.469	ENSCGRG00001024589	Rif1	69	51.435	Cricetulus_griseus_chok1gshd
ENSAPEG00000013228	rif1	50	52.855	ENSCGRG00000010713	Rif1	69	53.846	Cricetulus_griseus_crigri
ENSAPEG00000013228	rif1	65	72.300	ENSCSEG00000003945	rif1	67	74.908	Cynoglossus_semilaevis
ENSAPEG00000013228	rif1	99	72.351	ENSCVAG00000022479	rif1	97	72.351	Cyprinodon_variegatus
ENSAPEG00000013228	rif1	57	64.350	ENSDARG00000062650	rif1	71	64.313	Danio_rerio
ENSAPEG00000013228	rif1	63	52.461	ENSDNOG00000011194	RIF1	60	52.461	Dasypus_novemcinctus
ENSAPEG00000013228	rif1	63	49.578	ENSETEG00000012421	RIF1	63	49.698	Echinops_telfairi
ENSAPEG00000013228	rif1	60	66.337	ENSEASG00005023434	RIF1	61	66.337	Equus_asinus_asinus
ENSAPEG00000013228	rif1	65	57.033	ENSECAG00000012679	RIF1	64	57.033	Equus_caballus
ENSAPEG00000013228	rif1	75	69.351	ENSELUG00000006826	rif1	64	69.202	Esox_lucius
ENSAPEG00000013228	rif1	67	54.293	ENSFCAG00000029742	RIF1	64	54.293	Felis_catus
ENSAPEG00000013228	rif1	63	58.007	ENSFALG00000013874	RIF1	76	58.007	Ficedula_albicollis
ENSAPEG00000013228	rif1	64	54.254	ENSFDAG00000006538	RIF1	63	54.424	Fukomys_damarensis
ENSAPEG00000013228	rif1	100	74.265	ENSFHEG00000013721	rif1	97	74.265	Fundulus_heteroclitus
ENSAPEG00000013228	rif1	67	70.939	ENSGMOG00000003517	rif1	92	70.939	Gadus_morhua
ENSAPEG00000013228	rif1	100	76.239	ENSGAFG00000017196	rif1	97	76.239	Gambusia_affinis
ENSAPEG00000013228	rif1	65	55.006	ENSGAGG00000012595	RIF1	76	54.949	Gopherus_agassizii
ENSAPEG00000013228	rif1	56	57.742	ENSGGOG00000040178	RIF1	65	57.742	Gorilla_gorilla
ENSAPEG00000013228	rif1	100	77.491	ENSHBUG00000007125	rif1	97	77.491	Haplochromis_burtoni
ENSAPEG00000013228	rif1	52	54.254	ENSHGLG00100009807	RIF1	61	54.424	Heterocephalus_glaber_male
ENSAPEG00000013228	rif1	94	73.451	ENSHCOG00000015943	rif1	85	73.578	Hippocampus_comes
ENSAPEG00000013228	rif1	63	64.072	ENSIPUG00000021703	rif1	60	67.128	Ictalurus_punctatus
ENSAPEG00000013228	rif1	50	53.783	ENSSTOG00000020712	RIF1	69	54.722	Ictidomys_tridecemlineatus
ENSAPEG00000013228	rif1	65	50.000	ENSJJAG00000023000	Rif1	71	51.861	Jaculus_jaculus
ENSAPEG00000013228	rif1	99	75.823	ENSKMAG00000002852	rif1	96	76.076	Kryptolebias_marmoratus
ENSAPEG00000013228	rif1	96	78.653	ENSLBEG00000023196	rif1	85	78.653	Labrus_bergylta
ENSAPEG00000013228	rif1	63	59.033	ENSLACG00000005425	RIF1	63	59.033	Latimeria_chalumnae
ENSAPEG00000013228	rif1	77	49.390	ENSLOCG00000002657	rif1	77	52.993	Lepisosteus_oculatus
ENSAPEG00000013228	rif1	53	53.682	ENSLAFG00000009796	RIF1	66	54.126	Loxodonta_africana
ENSAPEG00000013228	rif1	65	54.600	ENSMLEG00000042945	RIF1	71	54.600	Mandrillus_leucophaeus
ENSAPEG00000013228	rif1	85	61.346	ENSMAMG00000001745	rif1	83	60.845	Mastacembelus_armatus
ENSAPEG00000013228	rif1	97	77.503	ENSMZEG00005020920	rif1	96	77.503	Maylandia_zebra
ENSAPEG00000013228	rif1	62	64.023	ENSMAUG00000013158	Rif1	66	64.023	Mesocricetus_auratus
ENSAPEG00000013228	rif1	62	54.545	ENSMICG00000046127	RIF1	70	54.545	Microcebus_murinus
ENSAPEG00000013228	rif1	64	51.707	ENSMOCG00000009381	Rif1	72	51.707	Microtus_ochrogaster
ENSAPEG00000013228	rif1	99	74.289	ENSMMOG00000006519	rif1	97	74.289	Mola_mola
ENSAPEG00000013228	rif1	64	56.197	ENSMODG00000003703	RIF1	63	56.777	Monodelphis_domestica
ENSAPEG00000013228	rif1	77	63.501	ENSMALG00000016759	rif1	99	58.312	Monopterus_albus
ENSAPEG00000013228	rif1	65	53.656	MGP_CAROLIEiJ_G0023555	Rif1	72	54.501	Mus_caroli
ENSAPEG00000013228	rif1	65	53.231	ENSMUSG00000036202	Rif1	70	54.061	Mus_musculus
ENSAPEG00000013228	rif1	62	48.100	MGP_PahariEiJ_G0025006	Rif1	63	49.877	Mus_pahari
ENSAPEG00000013228	rif1	65	53.910	MGP_SPRETEiJ_G0024476	Rif1	64	56.338	Mus_spretus
ENSAPEG00000013228	rif1	63	52.149	ENSMPUG00000000371	RIF1	63	54.051	Mustela_putorius_furo
ENSAPEG00000013228	rif1	51	52.069	ENSMLUG00000003376	RIF1	60	52.465	Myotis_lucifugus
ENSAPEG00000013228	rif1	53	53.974	ENSNGAG00000009268	Rif1	66	54.957	Nannospalax_galili
ENSAPEG00000013228	rif1	96	76.790	ENSNBRG00000014257	rif1	96	76.790	Neolamprologus_brichardi
ENSAPEG00000013228	rif1	65	53.763	ENSNLEG00000010955	RIF1	70	53.763	Nomascus_leucogenys
ENSAPEG00000013228	rif1	67	51.843	ENSODEG00000003950	RIF1	70	52.068	Octodon_degus
ENSAPEG00000013228	rif1	99	78.448	ENSONIG00000013657	rif1	97	78.448	Oreochromis_niloticus
ENSAPEG00000013228	rif1	52	57.958	ENSOANG00000006078	-	51	57.958	Ornithorhynchus_anatinus
ENSAPEG00000013228	rif1	74	54.380	ENSOCUG00000017435	RIF1	77	54.612	Oryctolagus_cuniculus
ENSAPEG00000013228	rif1	99	72.208	ENSORLG00020001302	rif1	96	72.208	Oryzias_latipes_hni
ENSAPEG00000013228	rif1	89	70.777	ENSORLG00015000009	rif1	87	72.335	Oryzias_latipes_hsok
ENSAPEG00000013228	rif1	62	72.462	ENSOMEG00000021513	rif1	62	72.462	Oryzias_melastigma
ENSAPEG00000013228	rif1	68	54.358	ENSOGAG00000006141	RIF1	70	54.358	Otolemur_garnettii
ENSAPEG00000013228	rif1	63	57.051	ENSOARG00000008930	RIF1	71	57.051	Ovis_aries
ENSAPEG00000013228	rif1	67	56.082	ENSPPAG00000023754	RIF1	70	54.634	Pan_paniscus
ENSAPEG00000013228	rif1	65	55.627	ENSPPRG00000003618	RIF1	61	55.627	Panthera_pardus
ENSAPEG00000013228	rif1	65	55.627	ENSPTIG00000020652	RIF1	61	55.627	Panthera_tigris_altaica
ENSAPEG00000013228	rif1	52	56.082	ENSPTRG00000012534	RIF1	69	56.082	Pan_troglodytes
ENSAPEG00000013228	rif1	77	65.483	ENSPMGG00000016141	rif1	90	67.125	Periophthalmus_magnuspinnatus
ENSAPEG00000013228	rif1	67	54.244	ENSPEMG00000000446	Rif1	71	55.063	Peromyscus_maniculatus_bairdii
ENSAPEG00000013228	rif1	65	58.056	ENSPCIG00000009185	RIF1	68	58.056	Phascolarctos_cinereus
ENSAPEG00000013228	rif1	100	76.263	ENSPFOG00000017804	rif1	98	75.123	Poecilia_formosa
ENSAPEG00000013228	rif1	92	74.114	ENSPFOG00000000554	-	98	75.158	Poecilia_formosa
ENSAPEG00000013228	rif1	99	75.000	ENSPLAG00000017945	rif1	96	75.000	Poecilia_latipinna
ENSAPEG00000013228	rif1	89	50.000	ENSPMEG00000006897	-	98	73.592	Poecilia_mexicana
ENSAPEG00000013228	rif1	100	76.209	ENSPREG00000018052	rif1	96	76.209	Poecilia_reticulata
ENSAPEG00000013228	rif1	67	54.964	ENSPPYG00000012846	RIF1	72	54.964	Pongo_abelii
ENSAPEG00000013228	rif1	54	59.100	ENSPVAG00000014276	RIF1	55	59.100	Pteropus_vampyrus
ENSAPEG00000013228	rif1	97	75.815	ENSPNYG00000012940	rif1	96	75.815	Pundamilia_nyererei
ENSAPEG00000013228	rif1	64	67.834	ENSPNAG00000016685	rif1	61	67.889	Pygocentrus_nattereri
ENSAPEG00000013228	rif1	52	51.657	ENSRNOG00000054901	Rif1	64	55.400	Rattus_norvegicus
ENSAPEG00000013228	rif1	51	54.843	ENSRBIG00000003704	RIF1	70	54.843	Rhinopithecus_bieti
ENSAPEG00000013228	rif1	63	58.184	ENSSHAG00000018552	RIF1	65	58.184	Sarcophilus_harrisii
ENSAPEG00000013228	rif1	77	66.539	ENSSFOG00015021539	rif1	85	66.285	Scleropages_formosus
ENSAPEG00000013228	rif1	51	76.341	ENSSMAG00000011704	rif1	96	76.341	Scophthalmus_maximus
ENSAPEG00000013228	rif1	93	82.570	ENSSDUG00000015632	rif1	96	82.864	Seriola_dumerili
ENSAPEG00000013228	rif1	69	80.562	ENSSLDG00000019531	rif1	95	80.562	Seriola_lalandi_dorsalis
ENSAPEG00000013228	rif1	61	83.570	ENSSPAG00000018359	rif1	90	83.570	Stegastes_partitus
ENSAPEG00000013228	rif1	71	54.002	ENSSSCG00000016395	RIF1	69	56.298	Sus_scrofa
ENSAPEG00000013228	rif1	88	71.281	ENSTRUG00000015808	rif1	93	74.146	Takifugu_rubripes
ENSAPEG00000013228	rif1	63	69.873	ENSTNIG00000011538	rif1	63	72.317	Tetraodon_nigroviridis
ENSAPEG00000013228	rif1	57	54.490	ENSTBEG00000016082	RIF1	64	54.490	Tupaia_belangeri
ENSAPEG00000013228	rif1	67	55.985	ENSTTRG00000011190	RIF1	66	55.985	Tursiops_truncatus
ENSAPEG00000013228	rif1	52	50.077	ENSUAMG00000026385	RIF1	58	52.542	Ursus_americanus
ENSAPEG00000013228	rif1	63	51.697	ENSUMAG00000000337	RIF1	62	53.567	Ursus_maritimus
ENSAPEG00000013228	rif1	66	53.589	ENSVPAG00000002162	RIF1	65	54.613	Vicugna_pacos
ENSAPEG00000013228	rif1	65	55.570	ENSVVUG00000011293	RIF1	66	55.570	Vulpes_vulpes
ENSAPEG00000013228	rif1	66	52.713	ENSXETG00000004530	rif1	65	52.713	Xenopus_tropicalis
ENSAPEG00000013228	rif1	100	71.907	ENSXMAG00000000506	rif1	97	71.907	Xiphophorus_maculatus