EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000013527 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 4024 bases
Position: chr3:7127124-7131147
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000018927	RRM_1	PF00076.22	2.1e-16	1	1
ENSAPEP00000018927	FYTT	PF07078.11	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000019442	-	1617	-	ENSAPEP00000018927	246 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000013527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000013527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000013527	-	100	52.174	ENSAPEG00000014603	alyref	100	54.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000013527	-	100	92.000	ENSAPOG00000000183	-	100	91.600	Acanthochromis_polyacanthus
ENSAPEG00000013527	-	100	65.201	ENSACIG00000020351	-	100	65.201	Amphilophus_citrinellus
ENSAPEG00000013527	-	98	49.451	ENSACIG00000006351	alyref	97	53.114	Amphilophus_citrinellus
ENSAPEG00000013527	-	100	99.593	ENSAOCG00000019305	-	100	99.593	Amphiprion_ocellaris
ENSAPEG00000013527	-	100	52.174	ENSAOCG00000014012	alyref	100	54.710	Amphiprion_ocellaris
ENSAPEG00000013527	-	100	76.953	ENSATEG00000000382	-	100	74.609	Anabas_testudineus
ENSAPEG00000013527	-	100	51.418	ENSATEG00000004307	alyref	100	51.943	Anabas_testudineus
ENSAPEG00000013527	-	52	63.704	ENSAPLG00000014745	-	98	61.481	Anas_platyrhynchos
ENSAPEG00000013527	-	100	70.342	ENSACLG00000010184	-	100	71.483	Astatotilapia_calliptera
ENSAPEG00000013527	-	100	50.903	ENSACLG00000008432	alyref	100	53.069	Astatotilapia_calliptera
ENSAPEG00000013527	-	100	53.710	ENSAMXG00000007359	alyref	100	54.770	Astyanax_mexicanus
ENSAPEG00000013527	-	98	43.243	ENSCING00000013568	-	99	46.360	Ciona_intestinalis
ENSAPEG00000013527	-	98	45.455	ENSCSAVG00000003324	-	99	44.828	Ciona_savignyi
ENSAPEG00000013527	-	100	52.555	ENSCSEG00000017800	alyref	100	52.555	Cynoglossus_semilaevis
ENSAPEG00000013527	-	100	53.309	ENSCVAG00000014869	alyref	100	55.147	Cyprinodon_variegatus
ENSAPEG00000013527	-	100	66.534	ENSCVAG00000007789	-	100	68.127	Cyprinodon_variegatus
ENSAPEG00000013527	-	100	54.577	ENSDARG00000077732	alyref	100	54.577	Danio_rerio
ENSAPEG00000013527	-	96	40.217	FBgn0010774	Ref1	71	42.564	Drosophila_melanogaster
ENSAPEG00000013527	-	98	46.875	ENSEBUG00000008253	alyref	95	45.896	Eptatretus_burgeri
ENSAPEG00000013527	-	100	43.651	ENSEBUG00000006305	alyref	100	42.857	Eptatretus_burgeri
ENSAPEG00000013527	-	100	59.160	ENSELUG00000008849	-	100	57.634	Esox_lucius
ENSAPEG00000013527	-	100	51.429	ENSELUG00000017178	alyref	100	55.556	Esox_lucius
ENSAPEG00000013527	-	61	66.026	ENSFALG00000011923	-	98	64.331	Ficedula_albicollis
ENSAPEG00000013527	-	100	70.916	ENSFHEG00000004698	-	100	70.518	Fundulus_heteroclitus
ENSAPEG00000013527	-	100	52.768	ENSFHEG00000019426	alyref	100	54.244	Fundulus_heteroclitus
ENSAPEG00000013527	-	100	51.661	ENSGMOG00000009882	alyref	71	59.794	Gadus_morhua
ENSAPEG00000013527	-	72	70.157	ENSGMOG00000013122	-	100	70.157	Gadus_morhua
ENSAPEG00000013527	-	100	66.932	ENSGAFG00000007573	-	100	64.940	Gambusia_affinis
ENSAPEG00000013527	-	100	53.114	ENSGAFG00000006014	alyref	100	54.212	Gambusia_affinis
ENSAPEG00000013527	-	100	50.903	ENSHBUG00000020196	alyref	100	53.069	Haplochromis_burtoni
ENSAPEG00000013527	-	100	69.663	ENSHBUG00000001454	-	100	70.037	Haplochromis_burtoni
ENSAPEG00000013527	-	98	67.600	ENSHCOG00000012825	-	95	61.600	Hippocampus_comes
ENSAPEG00000013527	-	100	55.197	ENSIPUG00000009469	alyref	100	55.556	Ictalurus_punctatus
ENSAPEG00000013527	-	79	56.345	ENSSTOG00000016570	-	99	57.214	Ictidomys_tridecemlineatus
ENSAPEG00000013527	-	100	71.713	ENSKMAG00000006462	-	100	70.916	Kryptolebias_marmoratus
ENSAPEG00000013527	-	100	50.362	ENSKMAG00000008912	alyref	100	54.513	Kryptolebias_marmoratus
ENSAPEG00000013527	-	99	69.141	ENSLBEG00000012930	-	100	65.490	Labrus_bergylta
ENSAPEG00000013527	-	98	55.466	ENSLBEG00000023118	alyref	88	57.600	Labrus_bergylta
ENSAPEG00000013527	-	100	69.118	ENSLBEG00000005387	-	100	68.635	Labrus_bergylta
ENSAPEG00000013527	-	84	56.164	ENSLOCG00000013879	alyref	89	57.014	Lepisosteus_oculatus
ENSAPEG00000013527	-	100	72.332	ENSMAMG00000005464	-	100	74.308	Mastacembelus_armatus
ENSAPEG00000013527	-	100	51.812	ENSMAMG00000003034	alyref	100	52.899	Mastacembelus_armatus
ENSAPEG00000013527	-	100	50.903	ENSMZEG00005008639	alyref	100	53.069	Maylandia_zebra
ENSAPEG00000013527	-	100	69.202	ENSMZEG00005012096	-	100	70.342	Maylandia_zebra
ENSAPEG00000013527	-	99	59.036	ENSMMOG00000007032	-	99	58.000	Mola_mola
ENSAPEG00000013527	-	98	48.601	ENSMMOG00000012458	alyref	96	54.851	Mola_mola
ENSAPEG00000013527	-	100	72.692	ENSMALG00000006054	-	100	71.154	Monopterus_albus
ENSAPEG00000013527	-	100	46.528	ENSMLUG00000014372	-	100	50.183	Myotis_lucifugus
ENSAPEG00000013527	-	100	45.324	ENSMLUG00000004098	-	100	50.373	Myotis_lucifugus
ENSAPEG00000013527	-	75	54.255	ENSMLUG00000030671	-	98	46.125	Myotis_lucifugus
ENSAPEG00000013527	-	97	43.542	ENSMLUG00000022178	-	98	44.118	Myotis_lucifugus
ENSAPEG00000013527	-	100	50.909	ENSMLUG00000006521	-	100	53.309	Myotis_lucifugus
ENSAPEG00000013527	-	97	47.212	ENSMLUG00000009247	-	98	44.944	Myotis_lucifugus
ENSAPEG00000013527	-	97	45.000	ENSMLUG00000022467	-	98	44.643	Myotis_lucifugus
ENSAPEG00000013527	-	75	52.332	ENSMLUG00000028605	-	98	45.126	Myotis_lucifugus
ENSAPEG00000013527	-	100	55.691	ENSNGAG00000022014	-	100	57.028	Nannospalax_galili
ENSAPEG00000013527	-	100	71.103	ENSNBRG00000017460	-	100	71.103	Neolamprologus_brichardi
ENSAPEG00000013527	-	100	50.538	ENSNBRG00000001747	alyref	100	53.430	Neolamprologus_brichardi
ENSAPEG00000013527	-	100	49.823	ENSONIG00000019434	alyref	100	52.143	Oreochromis_niloticus
ENSAPEG00000013527	-	100	71.923	ENSONIG00000003296	-	100	71.923	Oreochromis_niloticus
ENSAPEG00000013527	-	98	57.000	ENSORLG00000001620	-	88	55.000	Oryzias_latipes
ENSAPEG00000013527	-	100	67.829	ENSORLG00020015673	-	99	66.537	Oryzias_latipes_hni
ENSAPEG00000013527	-	100	51.095	ENSORLG00020011942	alyref	100	53.650	Oryzias_latipes_hni
ENSAPEG00000013527	-	100	51.471	ENSORLG00015022664	alyref	100	54.412	Oryzias_latipes_hsok
ENSAPEG00000013527	-	100	69.231	ENSORLG00015015143	-	99	66.409	Oryzias_latipes_hsok
ENSAPEG00000013527	-	100	48.454	ENSOMEG00000019176	alyref	100	55.147	Oryzias_melastigma
ENSAPEG00000013527	-	100	71.713	ENSOMEG00000007158	-	99	71.315	Oryzias_melastigma
ENSAPEG00000013527	-	90	53.879	ENSPPAG00000036403	-	68	63.187	Pan_paniscus
ENSAPEG00000013527	-	100	52.297	ENSPKIG00000007070	alyref	100	56.985	Paramormyrops_kingsleyae
ENSAPEG00000013527	-	98	56.809	ENSPKIG00000006233	-	80	57.752	Paramormyrops_kingsleyae
ENSAPEG00000013527	-	98	52.256	ENSPMGG00000016600	alyref	90	54.135	Periophthalmus_magnuspinnatus
ENSAPEG00000013527	-	67	64.118	ENSPMGG00000012994	-	93	62.805	Periophthalmus_magnuspinnatus
ENSAPEG00000013527	-	100	54.472	ENSPEMG00000016628	-	100	56.098	Peromyscus_maniculatus_bairdii
ENSAPEG00000013527	-	100	52.000	ENSPFOG00000022825	alyref	99	54.545	Poecilia_formosa
ENSAPEG00000013527	-	100	68.254	ENSPFOG00000017094	-	100	69.048	Poecilia_formosa
ENSAPEG00000013527	-	100	52.920	ENSPLAG00000006948	alyref	100	54.745	Poecilia_latipinna
ENSAPEG00000013527	-	100	68.254	ENSPLAG00000014380	-	100	69.048	Poecilia_latipinna
ENSAPEG00000013527	-	100	52.000	ENSPMEG00000003547	alyref	100	54.545	Poecilia_mexicana
ENSAPEG00000013527	-	100	68.254	ENSPMEG00000023039	-	100	69.048	Poecilia_mexicana
ENSAPEG00000013527	-	100	52.555	ENSPREG00000015795	alyref	100	54.745	Poecilia_reticulata
ENSAPEG00000013527	-	100	68.651	ENSPREG00000003649	-	100	69.048	Poecilia_reticulata
ENSAPEG00000013527	-	98	68.750	ENSPNYG00000002879	-	98	66.148	Pundamilia_nyererei
ENSAPEG00000013527	-	100	50.903	ENSPNYG00000017498	alyref	100	53.069	Pundamilia_nyererei
ENSAPEG00000013527	-	100	51.228	ENSPNAG00000002531	alyref	100	54.122	Pygocentrus_nattereri
ENSAPEG00000013527	-	75	61.702	ENSSBOG00000030924	-	84	62.234	Saimiri_boliviensis_boliviensis
ENSAPEG00000013527	-	99	49.593	ENSSHAG00000000609	-	100	45.817	Sarcophilus_harrisii
ENSAPEG00000013527	-	99	47.328	ENSSHAG00000012866	-	100	46.718	Sarcophilus_harrisii
ENSAPEG00000013527	-	84	63.158	ENSSFOG00015003923	alyref	73	62.679	Scleropages_formosus
ENSAPEG00000013527	-	81	53.953	ENSSFOG00015003678	alyref	83	61.538	Scleropages_formosus
ENSAPEG00000013527	-	100	53.430	ENSSMAG00000009283	alyref	100	54.874	Scophthalmus_maximus
ENSAPEG00000013527	-	100	70.385	ENSSMAG00000011169	-	100	74.231	Scophthalmus_maximus
ENSAPEG00000013527	-	100	52.174	ENSSDUG00000016158	alyref	100	53.986	Seriola_dumerili
ENSAPEG00000013527	-	100	50.903	ENSSLDG00000017803	alyref	100	50.542	Seriola_lalandi_dorsalis
ENSAPEG00000013527	-	98	89.796	ENSSPAG00000017028	-	96	89.431	Stegastes_partitus
ENSAPEG00000013527	-	100	63.433	ENSTRUG00000003051	-	100	62.357	Takifugu_rubripes
ENSAPEG00000013527	-	100	65.882	ENSTNIG00000014136	-	100	61.290	Tetraodon_nigroviridis
ENSAPEG00000013527	-	100	50.730	ENSTNIG00000011595	alyref	100	54.167	Tetraodon_nigroviridis
ENSAPEG00000013527	-	75	60.847	ENSVVUG00000000272	-	90	60.000	Vulpes_vulpes
ENSAPEG00000013527	-	98	52.809	ENSXCOG00000018047	alyref	98	53.532	Xiphophorus_couchianus
ENSAPEG00000013527	-	100	67.729	ENSXMAG00000018086	-	100	68.127	Xiphophorus_maculatus
ENSAPEG00000013527	-	98	52.809	ENSXMAG00000012218	alyref	98	53.532	Xiphophorus_maculatus