EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000014316 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: si:ch211-83f14.5
Full Name: HFM1%2C ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 11820 bases
Position: chr10:24644256-24656075
Accession: ZDB-GENE-061207-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000020256	ResIII	PF04851.15	2.1e-10	1	1
ENSAPEP00000020218	ResIII	PF04851.15	2.4e-09	1	1
ENSAPEP00000020256	DEAD	PF00270.29	7.8e-26	1	1
ENSAPEP00000020218	DEAD	PF00270.29	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000020761	-	2565	-	ENSAPEP00000020218	855 (aa)	-	-
ENSAPET00000020800	-	2475	-	ENSAPEP00000020256	824 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000014316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000014316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000014316	hfm1	86	32.131	ENSAPEG00000012554	snrnp200	72	32.000
ENSAPEG00000014316	hfm1	88	32.075	ENSAPEG00000006181	ascc3	67	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000014316	hfm1	96	69.532	ENSG00000162669	HFM1	64	65.461	Homo_sapiens
ENSAPEG00000014316	hfm1	100	95.455	ENSAPOG00000005304	hfm1	100	95.455	Acanthochromis_polyacanthus
ENSAPEG00000014316	hfm1	96	69.279	ENSAMEG00000000432	HFM1	55	69.279	Ailuropoda_melanoleuca
ENSAPEG00000014316	hfm1	96	89.607	ENSACIG00000021553	hfm1	73	89.607	Amphilophus_citrinellus
ENSAPEG00000014316	hfm1	100	98.836	ENSAOCG00000022839	hfm1	100	98.836	Amphiprion_ocellaris
ENSAPEG00000014316	hfm1	96	92.025	ENSATEG00000019181	hfm1	67	91.842	Anabas_testudineus
ENSAPEG00000014316	hfm1	96	69.949	ENSAPLG00000013639	HFM1	59	66.627	Anas_platyrhynchos
ENSAPEG00000014316	hfm1	100	64.369	ENSANAG00000029513	HFM1	65	64.369	Aotus_nancymaae
ENSAPEG00000014316	hfm1	99	83.724	ENSACLG00000009033	hfm1	100	83.724	Astatotilapia_calliptera
ENSAPEG00000014316	hfm1	99	76.634	ENSAMXG00000006108	hfm1	61	76.634	Astyanax_mexicanus
ENSAPEG00000014316	hfm1	96	69.406	ENSBTAG00000020856	HFM1	58	66.547	Bos_taurus
ENSAPEG00000014316	hfm1	100	65.029	ENSCJAG00000001843	HFM1	64	65.029	Callithrix_jacchus
ENSAPEG00000014316	hfm1	96	68.608	ENSCAFG00000020187	HFM1	55	68.608	Canis_familiaris
ENSAPEG00000014316	hfm1	100	66.467	ENSTSYG00000014250	HFM1	62	66.467	Carlito_syrichta
ENSAPEG00000014316	hfm1	96	67.975	ENSCPOG00000007421	HFM1	60	65.348	Cavia_porcellus
ENSAPEG00000014316	hfm1	96	68.394	ENSCCAG00000033206	HFM1	60	64.795	Cebus_capucinus
ENSAPEG00000014316	hfm1	100	64.994	ENSCATG00000030987	HFM1	64	64.994	Cercocebus_atys
ENSAPEG00000014316	hfm1	96	67.848	ENSCLAG00000005173	HFM1	56	65.981	Chinchilla_lanigera
ENSAPEG00000014316	hfm1	84	52.925	ENSCSAVG00000005094	-	100	52.925	Ciona_savignyi
ENSAPEG00000014316	hfm1	96	65.119	ENSCGRG00001016995	Hfm1	56	65.119	Cricetulus_griseus_chok1gshd
ENSAPEG00000014316	hfm1	96	67.509	ENSCGRG00000017181	Hfm1	58	64.868	Cricetulus_griseus_crigri
ENSAPEG00000014316	hfm1	96	85.570	ENSCSEG00000017659	hfm1	76	82.667	Cynoglossus_semilaevis
ENSAPEG00000014316	hfm1	86	84.388	ENSCVAG00000005075	hfm1	86	84.388	Cyprinodon_variegatus
ENSAPEG00000014316	hfm1	100	74.387	ENSDARG00000104288	hfm1	81	74.387	Danio_rerio
ENSAPEG00000014316	hfm1	97	68.836	ENSDNOG00000004776	HFM1	61	63.827	Dasypus_novemcinctus
ENSAPEG00000014316	hfm1	96	66.337	ENSDORG00000014661	Hfm1	56	66.337	Dipodomys_ordii
ENSAPEG00000014316	hfm1	50	61.098	ENSEBUG00000006133	-	91	61.098	Eptatretus_burgeri
ENSAPEG00000014316	hfm1	96	69.066	ENSEASG00005015424	HFM1	79	69.066	Equus_asinus_asinus
ENSAPEG00000014316	hfm1	96	69.027	ENSECAG00000024039	HFM1	57	65.796	Equus_caballus
ENSAPEG00000014316	hfm1	100	80.908	ENSELUG00000018944	hfm1	98	80.908	Esox_lucius
ENSAPEG00000014316	hfm1	96	69.027	ENSFCAG00000029116	HFM1	55	69.027	Felis_catus
ENSAPEG00000014316	hfm1	96	69.949	ENSFALG00000001781	HFM1	55	69.949	Ficedula_albicollis
ENSAPEG00000014316	hfm1	96	68.354	ENSFDAG00000020816	HFM1	56	65.707	Fukomys_damarensis
ENSAPEG00000014316	hfm1	96	77.370	ENSGMOG00000017436	hfm1	85	74.756	Gadus_morhua
ENSAPEG00000014316	hfm1	99	83.875	ENSGAFG00000018093	hfm1	100	83.875	Gambusia_affinis
ENSAPEG00000014316	hfm1	96	84.051	ENSGACG00000015686	hfm1	85	81.463	Gasterosteus_aculeatus
ENSAPEG00000014316	hfm1	100	65.461	ENSGGOG00000038524	HFM1	64	65.461	Gorilla_gorilla
ENSAPEG00000014316	hfm1	96	87.595	ENSHBUG00000007309	hfm1	79	84.485	Haplochromis_burtoni
ENSAPEG00000014316	hfm1	99	80.118	ENSHCOG00000019632	hfm1	100	80.118	Hippocampus_comes
ENSAPEG00000014316	hfm1	99	74.684	ENSIPUG00000017020	hfm1	98	74.684	Ictalurus_punctatus
ENSAPEG00000014316	hfm1	96	67.509	ENSJJAG00000017198	Hfm1	61	63.827	Jaculus_jaculus
ENSAPEG00000014316	hfm1	96	85.357	ENSKMAG00000002282	hfm1	84	83.843	Kryptolebias_marmoratus
ENSAPEG00000014316	hfm1	100	85.263	ENSLBEG00000006759	hfm1	99	85.263	Labrus_bergylta
ENSAPEG00000014316	hfm1	96	70.389	ENSLACG00000010698	HFM1	79	68.389	Latimeria_chalumnae
ENSAPEG00000014316	hfm1	96	76.136	ENSLOCG00000004931	hfm1	77	72.662	Lepisosteus_oculatus
ENSAPEG00000014316	hfm1	79	70.833	ENSLAFG00000015903	-	91	67.208	Loxodonta_africana
ENSAPEG00000014316	hfm1	100	62.881	ENSMFAG00000003649	HFM1	64	62.881	Macaca_fascicularis
ENSAPEG00000014316	hfm1	96	69.027	ENSMMUG00000006819	HFM1	64	64.994	Macaca_mulatta
ENSAPEG00000014316	hfm1	99	85.047	ENSMAMG00000004623	hfm1	100	85.047	Mastacembelus_armatus
ENSAPEG00000014316	hfm1	99	83.724	ENSMZEG00005004679	hfm1	100	83.724	Maylandia_zebra
ENSAPEG00000014316	hfm1	91	68.758	ENSMGAG00000008437	HFM1	93	68.758	Meleagris_gallopavo
ENSAPEG00000014316	hfm1	100	64.706	ENSMAUG00000018858	Hfm1	62	64.706	Mesocricetus_auratus
ENSAPEG00000014316	hfm1	96	68.561	ENSMICG00000037935	HFM1	64	64.452	Microcebus_murinus
ENSAPEG00000014316	hfm1	96	67.722	ENSMOCG00000014812	Hfm1	58	65.066	Microtus_ochrogaster
ENSAPEG00000014316	hfm1	100	88.256	ENSMMOG00000006148	hfm1	99	88.256	Mola_mola
ENSAPEG00000014316	hfm1	100	88.915	ENSMALG00000002401	hfm1	100	88.915	Monopterus_albus
ENSAPEG00000014316	hfm1	88	74.737	MGP_CAROLIEiJ_G0027496	Hfm1	50	74.737	Mus_caroli
ENSAPEG00000014316	hfm1	96	67.722	ENSMUSG00000043410	Hfm1	55	67.722	Mus_musculus
ENSAPEG00000014316	hfm1	96	67.595	MGP_PahariEiJ_G0017268	Hfm1	58	64.706	Mus_pahari
ENSAPEG00000014316	hfm1	96	68.228	MGP_SPRETEiJ_G0028495	Hfm1	55	68.228	Mus_spretus
ENSAPEG00000014316	hfm1	96	68.900	ENSMPUG00000004594	HFM1	57	65.796	Mustela_putorius_furo
ENSAPEG00000014316	hfm1	96	68.647	ENSMLUG00000010200	HFM1	58	65.947	Myotis_lucifugus
ENSAPEG00000014316	hfm1	99	82.984	ENSNBRG00000002910	hfm1	100	82.984	Neolamprologus_brichardi
ENSAPEG00000014316	hfm1	100	64.136	ENSNLEG00000010285	HFM1	63	64.136	Nomascus_leucogenys
ENSAPEG00000014316	hfm1	86	65.957	ENSMEUG00000015788	HFM1	52	66.887	Notamacropus_eugenii
ENSAPEG00000014316	hfm1	96	62.073	ENSOPRG00000013916	HFM1	58	60.791	Ochotona_princeps
ENSAPEG00000014316	hfm1	96	88.861	ENSONIG00000010590	hfm1	76	88.861	Oreochromis_niloticus
ENSAPEG00000014316	hfm1	96	81.519	ENSORLG00000026844	hfm1	100	83.969	Oryzias_latipes
ENSAPEG00000014316	hfm1	100	71.205	ENSORLG00020002951	hfm1	70	71.205	Oryzias_latipes_hni
ENSAPEG00000014316	hfm1	96	83.671	ENSOMEG00000016474	hfm1	62	80.385	Oryzias_melastigma
ENSAPEG00000014316	hfm1	100	65.868	ENSOGAG00000032369	HFM1	68	65.868	Otolemur_garnettii
ENSAPEG00000014316	hfm1	96	69.279	ENSOARG00000015812	HFM1	58	66.427	Ovis_aries
ENSAPEG00000014316	hfm1	96	69.785	ENSPPAG00000024582	HFM1	69	65.694	Pan_paniscus
ENSAPEG00000014316	hfm1	96	69.027	ENSPPRG00000003270	HFM1	55	69.027	Panthera_pardus
ENSAPEG00000014316	hfm1	96	69.153	ENSPTIG00000018881	HFM1	55	69.153	Panthera_tigris_altaica
ENSAPEG00000014316	hfm1	100	65.771	ENSPTRG00000000948	HFM1	63	65.771	Pan_troglodytes
ENSAPEG00000014316	hfm1	100	64.877	ENSPANG00000009838	HFM1	64	64.877	Papio_anubis
ENSAPEG00000014316	hfm1	96	75.032	ENSPKIG00000003810	hfm1	99	71.495	Paramormyrops_kingsleyae
ENSAPEG00000014316	hfm1	96	79.140	ENSPMGG00000011059	hfm1	99	82.116	Periophthalmus_magnuspinnatus
ENSAPEG00000014316	hfm1	96	67.468	ENSPEMG00000022852	Hfm1	58	64.826	Peromyscus_maniculatus_bairdii
ENSAPEG00000014316	hfm1	96	68.600	ENSPCIG00000014233	HFM1	57	66.029	Phascolarctos_cinereus
ENSAPEG00000014316	hfm1	96	85.823	ENSPFOG00000017194	hfm1	79	82.424	Poecilia_formosa
ENSAPEG00000014316	hfm1	96	85.696	ENSPLAG00000000571	hfm1	72	85.696	Poecilia_latipinna
ENSAPEG00000014316	hfm1	96	85.823	ENSPMEG00000019475	hfm1	73	85.823	Poecilia_mexicana
ENSAPEG00000014316	hfm1	99	83.023	ENSPREG00000007803	hfm1	100	83.023	Poecilia_reticulata
ENSAPEG00000014316	hfm1	100	65.461	ENSPPYG00000001163	HFM1	64	65.461	Pongo_abelii
ENSAPEG00000014316	hfm1	96	62.200	ENSPVAG00000009713	HFM1	61	60.327	Pteropus_vampyrus
ENSAPEG00000014316	hfm1	99	83.841	ENSPNYG00000001795	hfm1	100	83.841	Pundamilia_nyererei
ENSAPEG00000014316	hfm1	99	78.277	ENSPNAG00000010865	hfm1	88	78.277	Pygocentrus_nattereri
ENSAPEG00000014316	hfm1	100	64.826	ENSRNOG00000023299	Hfm1	62	64.826	Rattus_norvegicus
ENSAPEG00000014316	hfm1	100	65.796	ENSRROG00000045569	HFM1	63	65.796	Rhinopithecus_roxellana
ENSAPEG00000014316	hfm1	100	66.067	ENSSBOG00000027456	HFM1	59	66.067	Saimiri_boliviensis_boliviensis
ENSAPEG00000014316	hfm1	70	69.550	ENSSHAG00000014616	-	66	69.550	Sarcophilus_harrisii
ENSAPEG00000014316	hfm1	100	74.760	ENSSFOG00015020129	hfm1	59	74.760	Scleropages_formosus
ENSAPEG00000014316	hfm1	96	90.302	ENSSMAG00000006907	hfm1	85	83.927	Scophthalmus_maximus
ENSAPEG00000014316	hfm1	100	89.535	ENSSDUG00000011424	hfm1	100	89.535	Seriola_dumerili
ENSAPEG00000014316	hfm1	100	88.736	ENSSLDG00000016386	hfm1	100	88.736	Seriola_lalandi_dorsalis
ENSAPEG00000014316	hfm1	100	92.907	ENSSPAG00000001023	hfm1	100	92.907	Stegastes_partitus
ENSAPEG00000014316	hfm1	96	69.532	ENSSSCG00000006912	HFM1	61	66.906	Sus_scrofa
ENSAPEG00000014316	hfm1	96	69.571	ENSTGUG00000006172	HFM1	86	66.989	Taeniopygia_guttata
ENSAPEG00000014316	hfm1	55	81.607	ENSTNIG00000006962	hfm1	97	81.607	Tetraodon_nigroviridis
ENSAPEG00000014316	hfm1	96	69.027	ENSTTRG00000013933	HFM1	59	66.187	Tursiops_truncatus
ENSAPEG00000014316	hfm1	96	66.751	ENSVPAG00000011331	HFM1	58	64.029	Vicugna_pacos
ENSAPEG00000014316	hfm1	96	68.687	ENSVVUG00000020760	HFM1	79	68.687	Vulpes_vulpes
ENSAPEG00000014316	hfm1	99	82.874	ENSXMAG00000004178	hfm1	100	82.874	Xiphophorus_maculatus