EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000014539 (Gene tree)
Gene ID: -
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1A transcription repressor a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 4883 bases
Position: chr10:24693412-24698294
Accession: ZDB-GENE-050522-534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000020376	zf-C2H2	PF00096.26	2e-23	1	5
ENSAPEP00000020376	zf-C2H2	PF00096.26	2e-23	2	5
ENSAPEP00000020376	zf-C2H2	PF00096.26	2e-23	3	5
ENSAPEP00000020376	zf-C2H2	PF00096.26	2e-23	4	5
ENSAPEP00000020376	zf-C2H2	PF00096.26	2e-23	5	5
ENSAPEP00000020390	zf-C2H2	PF00096.26	2e-23	1	5
ENSAPEP00000020390	zf-C2H2	PF00096.26	2e-23	2	5
ENSAPEP00000020390	zf-C2H2	PF00096.26	2e-23	3	5
ENSAPEP00000020390	zf-C2H2	PF00096.26	2e-23	4	5
ENSAPEP00000020390	zf-C2H2	PF00096.26	2e-23	5	5
ENSAPEP00000020412	zf-C2H2	PF00096.26	1.8e-17	1	4
ENSAPEP00000020412	zf-C2H2	PF00096.26	1.8e-17	2	4
ENSAPEP00000020412	zf-C2H2	PF00096.26	1.8e-17	3	4
ENSAPEP00000020412	zf-C2H2	PF00096.26	1.8e-17	4	4
ENSAPEP00000020376	zf-met	PF12874.7	4e-07	1	1
ENSAPEP00000020390	zf-met	PF12874.7	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000020935	-	1909	-	ENSAPEP00000020390	399 (aa)	-	-
ENSAPET00000020921	-	1933	-	ENSAPEP00000020376	399 (aa)	-	-
ENSAPET00000020957	-	1158	-	ENSAPEP00000020412	385 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000014539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000014539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000014539	gfi1aa	51	40.876	ENSAPEG00000009835	-	99	45.833
ENSAPEG00000014539	gfi1aa	51	41.875	ENSAPEG00000018316	-	52	41.875
ENSAPEG00000014539	gfi1aa	54	39.130	ENSAPEG00000013097	-	76	41.420
ENSAPEG00000014539	gfi1aa	50	46.341	ENSAPEG00000008020	-	98	46.341
ENSAPEG00000014539	gfi1aa	50	39.877	ENSAPEG00000014777	-	50	42.857
ENSAPEG00000014539	gfi1aa	54	44.186	ENSAPEG00000016118	-	97	41.875
ENSAPEG00000014539	gfi1aa	57	46.429	ENSAPEG00000013550	-	99	44.118
ENSAPEG00000014539	gfi1aa	55	44.785	ENSAPEG00000004486	-	95	47.020
ENSAPEG00000014539	gfi1aa	51	41.259	ENSAPEG00000019527	-	63	41.259
ENSAPEG00000014539	gfi1aa	51	39.506	ENSAPEG00000005462	-	86	40.336
ENSAPEG00000014539	gfi1aa	51	43.210	ENSAPEG00000007389	-	88	41.566
ENSAPEG00000014539	gfi1aa	55	44.785	ENSAPEG00000009383	-	86	44.643
ENSAPEG00000014539	gfi1aa	53	37.241	ENSAPEG00000009533	-	95	37.778
ENSAPEG00000014539	gfi1aa	55	46.250	ENSAPEG00000013031	-	80	44.828
ENSAPEG00000014539	gfi1aa	51	40.909	ENSAPEG00000006427	znf646	62	40.909
ENSAPEG00000014539	gfi1aa	54	36.842	ENSAPEG00000004427	si:ch73-144d13.7	93	38.830
ENSAPEG00000014539	gfi1aa	53	39.869	ENSAPEG00000003892	-	53	39.869
ENSAPEG00000014539	gfi1aa	51	46.341	ENSAPEG00000015337	-	94	44.156
ENSAPEG00000014539	gfi1aa	50	40.588	ENSAPEG00000002888	-	91	42.857
ENSAPEG00000014539	gfi1aa	100	65.757	ENSAPEG00000023870	gfi1ab	100	65.509
ENSAPEG00000014539	gfi1aa	51	41.875	ENSAPEG00000018332	-	52	41.875
ENSAPEG00000014539	gfi1aa	58	37.615	ENSAPEG00000007889	-	78	35.200
ENSAPEG00000014539	gfi1aa	54	51.389	ENSAPEG00000006650	-	88	51.389
ENSAPEG00000014539	gfi1aa	51	43.421	ENSAPEG00000009515	-	89	44.615
ENSAPEG00000014539	gfi1aa	57	46.078	ENSAPEG00000010602	-	76	46.078
ENSAPEG00000014539	gfi1aa	51	38.621	ENSAPEG00000015310	-	57	43.357
ENSAPEG00000014539	gfi1aa	51	45.833	ENSAPEG00000012443	-	64	45.833
ENSAPEG00000014539	gfi1aa	52	50.617	ENSAPEG00000004256	-	88	48.276
ENSAPEG00000014539	gfi1aa	62	45.455	ENSAPEG00000019026	znf236	58	45.455
ENSAPEG00000014539	gfi1aa	61	46.018	ENSAPEG00000001546	-	95	48.673
ENSAPEG00000014539	gfi1aa	57	48.000	ENSAPEG00000011020	-	95	48.000
ENSAPEG00000014539	gfi1aa	51	46.939	ENSAPEG00000006358	znf341	58	44.898
ENSAPEG00000014539	gfi1aa	53	35.398	ENSAPEG00000018796	-	90	41.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000014539	gfi1aa	100	98.997	ENSAPOG00000005043	gfi1aa	100	98.997	Acanthochromis_polyacanthus
ENSAPEG00000014539	gfi1aa	100	87.719	ENSACIG00000021378	gfi1aa	100	87.719	Amphilophus_citrinellus
ENSAPEG00000014539	gfi1aa	100	99.749	ENSAOCG00000022957	gfi1aa	100	99.749	Amphiprion_ocellaris
ENSAPEG00000014539	gfi1aa	100	86.750	ENSATEG00000019026	gfi1aa	99	91.892	Anabas_testudineus
ENSAPEG00000014539	gfi1aa	100	89.474	ENSACLG00000008641	gfi1aa	100	89.474	Astatotilapia_calliptera
ENSAPEG00000014539	gfi1aa	100	65.423	ENSDARG00000020746	gfi1aa	100	63.882	Danio_rerio
ENSAPEG00000014539	gfi1aa	100	86.305	ENSHBUG00000007389	gfi1aa	100	86.305	Haplochromis_burtoni
ENSAPEG00000014539	gfi1aa	100	79.699	ENSKMAG00000002148	gfi1aa	100	79.901	Kryptolebias_marmoratus
ENSAPEG00000014539	gfi1aa	100	82.587	ENSLBEG00000006603	gfi1aa	100	82.587	Labrus_bergylta
ENSAPEG00000014539	gfi1aa	100	83.750	ENSMAMG00000004896	gfi1aa	100	82.250	Mastacembelus_armatus
ENSAPEG00000014539	gfi1aa	100	89.474	ENSMZEG00005004578	gfi1aa	100	89.474	Maylandia_zebra
ENSAPEG00000014539	gfi1aa	100	66.150	ENSMMOG00000006167	gfi1aa	99	80.612	Mola_mola
ENSAPEG00000014539	gfi1aa	100	89.223	ENSNBRG00000002673	gfi1aa	100	89.223	Neolamprologus_brichardi
ENSAPEG00000014539	gfi1aa	100	86.967	ENSPNYG00000002189	gfi1aa	100	86.967	Pundamilia_nyererei
ENSAPEG00000014539	gfi1aa	100	82.310	ENSSMAG00000006797	gfi1aa	100	82.801	Scophthalmus_maximus
ENSAPEG00000014539	gfi1aa	100	89.801	ENSSDUG00000011654	gfi1aa	100	89.801	Seriola_dumerili
ENSAPEG00000014539	gfi1aa	100	87.147	ENSSLDG00000016512	gfi1aa	100	87.147	Seriola_lalandi_dorsalis
ENSAPEG00000014539	gfi1aa	98	96.774	ENSSPAG00000000927	gfi1aa	94	96.774	Stegastes_partitus
ENSAPEG00000014539	gfi1aa	100	82.294	ENSTRUG00000004744	gfi1aa	100	82.294	Takifugu_rubripes