EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000014961 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 345 bases
Position: chr4:26139484-26139828
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000020949	LSM	PF01423.22	4.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000021506	-	345	-	ENSAPEP00000020949	114 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000014961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000014961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000014961	snrpd1	76	32.184	ENSAPEG00000006260	-	56	35.000
ENSAPEG00000014961	snrpd1	94	95.536	ENSAPEG00000012539	SNRPD1	100	95.536
ENSAPEG00000014961	snrpd1	76	32.184	ENSAPEG00000006273	snrpd3l	57	31.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000014961	snrpd1	100	92.437	ENSG00000167088	SNRPD1	100	92.437	Homo_sapiens
ENSAPEG00000014961	snrpd1	100	95.798	ENSAPOG00000019446	snrpd1	65	95.798	Acanthochromis_polyacanthus
ENSAPEG00000014961	snrpd1	98	90.598	ENSAMEG00000002576	SNRPD1	100	90.598	Ailuropoda_melanoleuca
ENSAPEG00000014961	snrpd1	94	95.536	ENSACIG00000011263	snrpd1	100	95.536	Amphilophus_citrinellus
ENSAPEG00000014961	snrpd1	100	95.798	ENSAOCG00000007406	snrpd1	100	95.798	Amphiprion_ocellaris
ENSAPEG00000014961	snrpd1	100	95.798	ENSATEG00000014399	snrpd1	100	95.798	Anabas_testudineus
ENSAPEG00000014961	snrpd1	96	92.174	ENSAPLG00000012256	SNRPD1	97	92.174	Anas_platyrhynchos
ENSAPEG00000014961	snrpd1	100	92.437	ENSACAG00000006364	SNRPD1	100	92.437	Anolis_carolinensis
ENSAPEG00000014961	snrpd1	100	92.437	ENSANAG00000025641	SNRPD1	100	92.437	Aotus_nancymaae
ENSAPEG00000014961	snrpd1	94	95.536	ENSACLG00000017406	snrpd1	100	95.536	Astatotilapia_calliptera
ENSAPEG00000014961	snrpd1	100	94.958	ENSAMXG00000004589	snrpd1	100	94.958	Astyanax_mexicanus
ENSAPEG00000014961	snrpd1	78	85.106	ENSBTAG00000055316	-	81	85.106	Bos_taurus
ENSAPEG00000014961	snrpd1	94	88.393	ENSBTAG00000047266	-	94	88.393	Bos_taurus
ENSAPEG00000014961	snrpd1	80	88.542	ENSBTAG00000012376	-	72	88.542	Bos_taurus
ENSAPEG00000014961	snrpd1	100	92.437	ENSBTAG00000008292	SNRPD1	100	92.437	Bos_taurus
ENSAPEG00000014961	snrpd1	71	74.419	WBGene00004916	snr-3	76	69.792	Caenorhabditis_elegans
ENSAPEG00000014961	snrpd1	100	92.437	ENSCJAG00000042955	SNRPD1	100	92.437	Callithrix_jacchus
ENSAPEG00000014961	snrpd1	100	92.437	ENSCAFG00000018247	SNRPD1	100	92.437	Canis_familiaris
ENSAPEG00000014961	snrpd1	79	90.526	ENSCAFG00020015914	SNRPD1	74	90.526	Canis_lupus_dingo
ENSAPEG00000014961	snrpd1	94	89.286	ENSCHIG00000005557	SNRPD1	92	90.909	Capra_hircus
ENSAPEG00000014961	snrpd1	100	92.437	ENSTSYG00000030028	SNRPD1	100	92.437	Carlito_syrichta
ENSAPEG00000014961	snrpd1	90	90.741	ENSCAPG00000008103	SNRPD1	93	90.741	Cavia_aperea
ENSAPEG00000014961	snrpd1	100	92.437	ENSCPOG00000004679	SNRPD1	100	92.437	Cavia_porcellus
ENSAPEG00000014961	snrpd1	94	89.286	ENSCCAG00000016652	-	94	89.286	Cebus_capucinus
ENSAPEG00000014961	snrpd1	80	86.458	ENSCCAG00000005390	-	81	86.458	Cebus_capucinus
ENSAPEG00000014961	snrpd1	100	92.437	ENSCCAG00000032658	SNRPD1	100	92.437	Cebus_capucinus
ENSAPEG00000014961	snrpd1	94	91.071	ENSCCAG00000020611	-	94	91.071	Cebus_capucinus
ENSAPEG00000014961	snrpd1	100	92.437	ENSCATG00000039978	SNRPD1	100	92.437	Cercocebus_atys
ENSAPEG00000014961	snrpd1	100	92.437	ENSCLAG00000008691	SNRPD1	100	92.437	Chinchilla_lanigera
ENSAPEG00000014961	snrpd1	100	92.437	ENSCSAG00000017654	SNRPD1	100	92.437	Chlorocebus_sabaeus
ENSAPEG00000014961	snrpd1	100	92.437	ENSCPBG00000023143	SNRPD1	100	92.437	Chrysemys_picta_bellii
ENSAPEG00000014961	snrpd1	71	79.070	ENSCING00000024100	-	69	79.070	Ciona_intestinalis
ENSAPEG00000014961	snrpd1	72	78.161	ENSCSAVG00000004578	-	70	78.161	Ciona_savignyi
ENSAPEG00000014961	snrpd1	84	67.327	ENSCGRG00001009945	-	90	67.327	Cricetulus_griseus_chok1gshd
ENSAPEG00000014961	snrpd1	100	92.437	ENSCGRG00001021055	-	100	92.437	Cricetulus_griseus_chok1gshd
ENSAPEG00000014961	snrpd1	84	67.327	ENSCGRG00000006224	-	90	67.327	Cricetulus_griseus_crigri
ENSAPEG00000014961	snrpd1	100	92.437	ENSCGRG00000000490	-	100	92.437	Cricetulus_griseus_crigri
ENSAPEG00000014961	snrpd1	100	94.118	ENSCSEG00000018141	snrpd1	100	94.118	Cynoglossus_semilaevis
ENSAPEG00000014961	snrpd1	100	95.798	ENSCVAG00000000534	snrpd1	100	95.798	Cyprinodon_variegatus
ENSAPEG00000014961	snrpd1	100	94.958	ENSDARG00000011648	snrpd1	100	94.958	Danio_rerio
ENSAPEG00000014961	snrpd1	100	92.437	ENSDNOG00000040310	SNRPD1	100	92.437	Dasypus_novemcinctus
ENSAPEG00000014961	snrpd1	100	92.437	ENSDORG00000008349	Snrpd1	100	92.437	Dipodomys_ordii
ENSAPEG00000014961	snrpd1	78	76.596	FBgn0261933	SmD1	76	76.596	Drosophila_melanogaster
ENSAPEG00000014961	snrpd1	71	95.062	ENSETEG00000011689	SNRPD1	68	95.062	Echinops_telfairi
ENSAPEG00000014961	snrpd1	94	88.393	ENSEBUG00000003170	snrpd1	94	88.393	Eptatretus_burgeri
ENSAPEG00000014961	snrpd1	94	91.964	ENSEASG00005002433	SNRPD1	100	91.964	Equus_asinus_asinus
ENSAPEG00000014961	snrpd1	94	91.964	ENSECAG00000014373	SNRPD1	100	91.964	Equus_caballus
ENSAPEG00000014961	snrpd1	74	89.888	ENSEEUG00000004987	SNRPD1	100	89.888	Erinaceus_europaeus
ENSAPEG00000014961	snrpd1	93	82.883	ENSELUG00000000088	snrpd1	79	92.553	Esox_lucius
ENSAPEG00000014961	snrpd1	100	92.437	ENSFCAG00000012352	SNRPD1	100	92.437	Felis_catus
ENSAPEG00000014961	snrpd1	94	91.964	ENSFALG00000002646	SNRPD1	100	91.964	Ficedula_albicollis
ENSAPEG00000014961	snrpd1	100	94.958	ENSGMOG00000015607	snrpd1	100	94.958	Gadus_morhua
ENSAPEG00000014961	snrpd1	100	92.437	ENSGALG00000041334	SNRPD1	100	92.437	Gallus_gallus
ENSAPEG00000014961	snrpd1	100	95.798	ENSGAFG00000011171	snrpd1	100	95.798	Gambusia_affinis
ENSAPEG00000014961	snrpd1	100	94.958	ENSGACG00000005201	SNRPD1	100	94.958	Gasterosteus_aculeatus
ENSAPEG00000014961	snrpd1	100	92.437	ENSGAGG00000011197	SNRPD1	100	92.437	Gopherus_agassizii
ENSAPEG00000014961	snrpd1	80	86.458	ENSGGOG00000026706	-	80	86.458	Gorilla_gorilla
ENSAPEG00000014961	snrpd1	100	92.437	ENSGGOG00000041053	SNRPD1	100	92.437	Gorilla_gorilla
ENSAPEG00000014961	snrpd1	100	95.798	ENSHBUG00000003236	snrpd1	100	95.798	Haplochromis_burtoni
ENSAPEG00000014961	snrpd1	100	92.437	ENSHGLG00000007152	SNRPD1	100	92.437	Heterocephalus_glaber_female
ENSAPEG00000014961	snrpd1	100	92.437	ENSHGLG00100008618	SNRPD1	100	92.437	Heterocephalus_glaber_male
ENSAPEG00000014961	snrpd1	100	95.798	ENSIPUG00000003576	snrpd1	100	95.798	Ictalurus_punctatus
ENSAPEG00000014961	snrpd1	100	92.437	ENSSTOG00000000485	SNRPD1	100	92.437	Ictidomys_tridecemlineatus
ENSAPEG00000014961	snrpd1	100	92.437	ENSJJAG00000017698	Snrpd1	100	92.437	Jaculus_jaculus
ENSAPEG00000014961	snrpd1	100	95.798	ENSKMAG00000005987	snrpd1	100	95.798	Kryptolebias_marmoratus
ENSAPEG00000014961	snrpd1	100	95.798	ENSLBEG00000003327	snrpd1	100	95.798	Labrus_bergylta
ENSAPEG00000014961	snrpd1	100	92.437	ENSLACG00000001955	SNRPD1	100	92.437	Latimeria_chalumnae
ENSAPEG00000014961	snrpd1	92	90.909	ENSLOCG00000002003	snrpd1	94	90.909	Lepisosteus_oculatus
ENSAPEG00000014961	snrpd1	93	90.090	ENSLAFG00000005819	SNRPD1	94	90.090	Loxodonta_africana
ENSAPEG00000014961	snrpd1	100	92.437	ENSMFAG00000042080	SNRPD1	100	92.437	Macaca_fascicularis
ENSAPEG00000014961	snrpd1	96	92.105	ENSMMUG00000003992	SNRPD1	97	92.105	Macaca_mulatta
ENSAPEG00000014961	snrpd1	100	92.437	ENSMNEG00000041296	SNRPD1	100	92.437	Macaca_nemestrina
ENSAPEG00000014961	snrpd1	100	92.437	ENSMLEG00000028659	SNRPD1	100	92.437	Mandrillus_leucophaeus
ENSAPEG00000014961	snrpd1	100	95.798	ENSMAMG00000012971	snrpd1	100	95.798	Mastacembelus_armatus
ENSAPEG00000014961	snrpd1	100	95.798	ENSMZEG00005004685	snrpd1	100	95.798	Maylandia_zebra
ENSAPEG00000014961	snrpd1	96	92.174	ENSMGAG00000011598	SNRPD1	95	92.174	Meleagris_gallopavo
ENSAPEG00000014961	snrpd1	80	75.000	ENSMAUG00000016467	-	86	75.000	Mesocricetus_auratus
ENSAPEG00000014961	snrpd1	81	85.567	ENSMAUG00000006829	-	59	90.000	Mesocricetus_auratus
ENSAPEG00000014961	snrpd1	80	75.000	ENSMAUG00000016502	-	86	75.000	Mesocricetus_auratus
ENSAPEG00000014961	snrpd1	100	92.437	ENSMICG00000044066	SNRPD1	100	92.437	Microcebus_murinus
ENSAPEG00000014961	snrpd1	100	92.437	ENSMOCG00000017367	Snrpd1	100	92.437	Microtus_ochrogaster
ENSAPEG00000014961	snrpd1	100	95.798	ENSMMOG00000019089	snrpd1	100	95.798	Mola_mola
ENSAPEG00000014961	snrpd1	100	92.437	ENSMODG00000021487	SNRPD1	100	92.437	Monodelphis_domestica
ENSAPEG00000014961	snrpd1	100	95.798	ENSMALG00000014459	snrpd1	100	95.798	Monopterus_albus
ENSAPEG00000014961	snrpd1	100	92.437	MGP_CAROLIEiJ_G0021994	Snrpd1	100	92.437	Mus_caroli
ENSAPEG00000014961	snrpd1	100	92.437	ENSMUSG00000002477	Snrpd1	100	92.437	Mus_musculus
ENSAPEG00000014961	snrpd1	100	92.437	MGP_PahariEiJ_G0018731	Snrpd1	100	92.437	Mus_pahari
ENSAPEG00000014961	snrpd1	100	92.437	MGP_SPRETEiJ_G0022910	Snrpd1	100	92.437	Mus_spretus
ENSAPEG00000014961	snrpd1	94	91.071	ENSMPUG00000020041	-	94	91.071	Mustela_putorius_furo
ENSAPEG00000014961	snrpd1	98	90.598	ENSMPUG00000005567	-	100	90.598	Mustela_putorius_furo
ENSAPEG00000014961	snrpd1	78	89.362	ENSMLUG00000009124	SNRPD1	73	89.362	Myotis_lucifugus
ENSAPEG00000014961	snrpd1	100	92.437	ENSNGAG00000023946	Snrpd1	100	92.437	Nannospalax_galili
ENSAPEG00000014961	snrpd1	78	94.681	ENSNBRG00000012119	snrpd1	78	94.681	Neolamprologus_brichardi
ENSAPEG00000014961	snrpd1	94	91.743	ENSNLEG00000031430	SNRPD1	94	92.661	Nomascus_leucogenys
ENSAPEG00000014961	snrpd1	100	92.437	ENSODEG00000005764	SNRPD1	100	92.437	Octodon_degus
ENSAPEG00000014961	snrpd1	100	95.798	ENSONIG00000002486	snrpd1	100	95.798	Oreochromis_niloticus
ENSAPEG00000014961	snrpd1	82	81.633	ENSOANG00000004638	-	82	81.633	Ornithorhynchus_anatinus
ENSAPEG00000014961	snrpd1	98	90.598	ENSOCUG00000023761	-	100	90.598	Oryctolagus_cuniculus
ENSAPEG00000014961	snrpd1	94	91.071	ENSOCUG00000014399	-	94	91.071	Oryctolagus_cuniculus
ENSAPEG00000014961	snrpd1	94	95.536	ENSORLG00000012516	snrpd1	100	95.536	Oryzias_latipes
ENSAPEG00000014961	snrpd1	100	95.798	ENSORLG00020005743	snrpd1	100	95.798	Oryzias_latipes_hni
ENSAPEG00000014961	snrpd1	100	95.798	ENSORLG00015013402	snrpd1	100	95.798	Oryzias_latipes_hsok
ENSAPEG00000014961	snrpd1	100	95.798	ENSOMEG00000011571	snrpd1	100	95.798	Oryzias_melastigma
ENSAPEG00000014961	snrpd1	100	89.076	ENSOGAG00000007833	SNRPD1	100	89.076	Otolemur_garnettii
ENSAPEG00000014961	snrpd1	80	90.625	ENSOARG00000003413	-	72	90.625	Ovis_aries
ENSAPEG00000014961	snrpd1	100	92.437	ENSPPAG00000042593	SNRPD1	100	92.437	Pan_paniscus
ENSAPEG00000014961	snrpd1	100	92.437	ENSPPRG00000002399	SNRPD1	100	92.437	Panthera_pardus
ENSAPEG00000014961	snrpd1	94	66.071	ENSPPRG00000005009	-	92	66.071	Panthera_pardus
ENSAPEG00000014961	snrpd1	96	92.105	ENSPTIG00000013206	SNRPD1	100	92.105	Panthera_tigris_altaica
ENSAPEG00000014961	snrpd1	85	86.275	ENSPTRG00000050159	-	87	86.275	Pan_troglodytes
ENSAPEG00000014961	snrpd1	100	92.437	ENSPTRG00000009909	SNRPD1	100	92.437	Pan_troglodytes
ENSAPEG00000014961	snrpd1	100	92.437	ENSPANG00000023478	SNRPD1	100	92.437	Papio_anubis
ENSAPEG00000014961	snrpd1	100	94.118	ENSPKIG00000003985	SNRPD1	100	94.118	Paramormyrops_kingsleyae
ENSAPEG00000014961	snrpd1	94	94.643	ENSPKIG00000021610	snrpd1	100	94.643	Paramormyrops_kingsleyae
ENSAPEG00000014961	snrpd1	100	95.798	ENSPMGG00000001862	snrpd1	100	95.798	Periophthalmus_magnuspinnatus
ENSAPEG00000014961	snrpd1	100	92.437	ENSPEMG00000014773	-	100	92.437	Peromyscus_maniculatus_bairdii
ENSAPEG00000014961	snrpd1	85	76.923	ENSPMAG00000003938	-	85	76.923	Petromyzon_marinus
ENSAPEG00000014961	snrpd1	100	92.437	ENSPCIG00000020320	SNRPD1	100	92.437	Phascolarctos_cinereus
ENSAPEG00000014961	snrpd1	80	94.792	ENSPFOG00000012448	SNRPD1	85	94.792	Poecilia_formosa
ENSAPEG00000014961	snrpd1	80	94.792	ENSPLAG00000006738	snrpd1	85	94.792	Poecilia_latipinna
ENSAPEG00000014961	snrpd1	80	94.792	ENSPMEG00000021942	snrpd1	85	94.792	Poecilia_mexicana
ENSAPEG00000014961	snrpd1	100	95.798	ENSPREG00000007094	snrpd1	100	95.798	Poecilia_reticulata
ENSAPEG00000014961	snrpd1	100	92.437	ENSPPYG00000025874	SNRPD1	100	92.437	Pongo_abelii
ENSAPEG00000014961	snrpd1	100	92.437	ENSPCOG00000013327	SNRPD1	100	92.437	Propithecus_coquereli
ENSAPEG00000014961	snrpd1	100	92.437	ENSPVAG00000005511	SNRPD1	80	92.437	Pteropus_vampyrus
ENSAPEG00000014961	snrpd1	100	94.118	ENSPNAG00000017824	snrpd1	100	94.118	Pygocentrus_nattereri
ENSAPEG00000014961	snrpd1	100	92.437	ENSRNOG00000013714	Snrpd1	100	92.437	Rattus_norvegicus
ENSAPEG00000014961	snrpd1	100	92.437	ENSRBIG00000022996	SNRPD1	100	92.437	Rhinopithecus_bieti
ENSAPEG00000014961	snrpd1	100	92.437	ENSRROG00000027640	SNRPD1	100	92.437	Rhinopithecus_roxellana
ENSAPEG00000014961	snrpd1	100	92.437	ENSSBOG00000020998	SNRPD1	100	92.437	Saimiri_boliviensis_boliviensis
ENSAPEG00000014961	snrpd1	100	92.437	ENSSHAG00000011791	SNRPD1	100	92.437	Sarcophilus_harrisii
ENSAPEG00000014961	snrpd1	100	94.958	ENSSFOG00015022253	-	100	94.958	Scleropages_formosus
ENSAPEG00000014961	snrpd1	100	94.958	ENSSFOG00015008809	-	100	94.958	Scleropages_formosus
ENSAPEG00000014961	snrpd1	100	94.958	ENSSMAG00000008765	snrpd1	100	94.958	Scophthalmus_maximus
ENSAPEG00000014961	snrpd1	97	93.966	ENSSDUG00000010521	snrpd1	98	93.966	Seriola_dumerili
ENSAPEG00000014961	snrpd1	100	95.798	ENSSLDG00000011858	snrpd1	100	95.798	Seriola_lalandi_dorsalis
ENSAPEG00000014961	snrpd1	54	89.552	ENSSARG00000004271	SNRPD1	100	89.552	Sorex_araneus
ENSAPEG00000014961	snrpd1	100	92.437	ENSSPUG00000002824	SNRPD1	100	92.437	Sphenodon_punctatus
ENSAPEG00000014961	snrpd1	94	95.536	ENSSPAG00000015229	snrpd1	100	95.536	Stegastes_partitus
ENSAPEG00000014961	snrpd1	100	92.437	ENSSSCG00000003701	SNRPD1	100	92.437	Sus_scrofa
ENSAPEG00000014961	snrpd1	96	92.174	ENSTGUG00000005095	SNRPD1	97	92.174	Taeniopygia_guttata
ENSAPEG00000014961	snrpd1	94	93.750	ENSTRUG00000008977	snrpd1	100	93.750	Takifugu_rubripes
ENSAPEG00000014961	snrpd1	82	97.872	ENSTNIG00000001224	snrpd1	90	97.872	Tetraodon_nigroviridis
ENSAPEG00000014961	snrpd1	71	95.062	ENSTBEG00000013776	SNRPD1	92	95.062	Tupaia_belangeri
ENSAPEG00000014961	snrpd1	96	92.174	ENSTTRG00000002654	SNRPD1	100	92.174	Tursiops_truncatus
ENSAPEG00000014961	snrpd1	96	92.105	ENSUAMG00000013431	SNRPD1	97	92.105	Ursus_americanus
ENSAPEG00000014961	snrpd1	100	92.437	ENSUMAG00000019740	SNRPD1	100	92.437	Ursus_maritimus
ENSAPEG00000014961	snrpd1	100	92.437	ENSVPAG00000010056	SNRPD1	80	92.437	Vicugna_pacos
ENSAPEG00000014961	snrpd1	94	91.964	ENSVVUG00000004009	SNRPD1	100	91.964	Vulpes_vulpes
ENSAPEG00000014961	snrpd1	94	90.179	ENSXETG00000027354	snrpd1	94	90.179	Xenopus_tropicalis
ENSAPEG00000014961	snrpd1	100	95.798	ENSXCOG00000020108	snrpd1	100	95.798	Xiphophorus_couchianus
ENSAPEG00000014961	snrpd1	100	95.798	ENSXMAG00000003368	snrpd1	100	95.798	Xiphophorus_maculatus