EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000015092 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 3009 bases
Position: chr16:9868284-9871292
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000021148	zf-C2H2	PF00096.26	5.3e-11	1	2
ENSAPEP00000021148	zf-C2H2	PF00096.26	5.3e-11	2	2
ENSAPEP00000021148	zf-met	PF12874.7	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000021707	-	1125	-	ENSAPEP00000021148	374 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000015092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000015092's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000015092	prdm12b	100	74.169	ENSAPEG00000022849	-	99	73.913
ENSAPEG00000015092	prdm12b	64	32.990	ENSAPEG00000016846	prdm5	88	32.990
ENSAPEG00000015092	prdm12b	56	48.000	ENSAPEG00000007389	-	55	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000015092	prdm12b	92	80.403	ENSG00000130711	PRDM12	99	75.263	Homo_sapiens
ENSAPEG00000015092	prdm12b	100	67.546	ENSAPOG00000018234	-	100	67.546	Acanthochromis_polyacanthus
ENSAPEG00000015092	prdm12b	100	96.615	ENSAPOG00000016051	prdm12b	100	96.615	Acanthochromis_polyacanthus
ENSAPEG00000015092	prdm12b	89	81.737	ENSAMEG00000016234	PRDM12	99	81.437	Ailuropoda_melanoleuca
ENSAPEG00000015092	prdm12b	100	93.386	ENSACIG00000019578	prdm12b	100	92.593	Amphilophus_citrinellus
ENSAPEG00000015092	prdm12b	100	80.155	ENSACIG00000005193	-	100	80.155	Amphilophus_citrinellus
ENSAPEG00000015092	prdm12b	100	98.939	ENSAOCG00000015040	prdm12b	100	98.939	Amphiprion_ocellaris
ENSAPEG00000015092	prdm12b	100	81.959	ENSATEG00000014595	-	100	81.959	Anabas_testudineus
ENSAPEG00000015092	prdm12b	94	79.887	ENSANAG00000020616	PRDM12	97	81.105	Aotus_nancymaae
ENSAPEG00000015092	prdm12b	100	78.141	ENSACLG00000007631	-	100	78.643	Astatotilapia_calliptera
ENSAPEG00000015092	prdm12b	100	89.572	ENSACLG00000011876	prdm12b	100	88.770	Astatotilapia_calliptera
ENSAPEG00000015092	prdm12b	100	84.000	ENSAMXG00000033665	prdm12b	100	83.862	Astyanax_mexicanus
ENSAPEG00000015092	prdm12b	100	81.551	ENSAMXG00000008540	PRDM12	100	81.283	Astyanax_mexicanus
ENSAPEG00000015092	prdm12b	92	81.268	ENSBTAG00000023797	PRDM12	99	76.923	Bos_taurus
ENSAPEG00000015092	prdm12b	92	80.403	ENSCJAG00000020540	PRDM12	99	76.393	Callithrix_jacchus
ENSAPEG00000015092	prdm12b	81	80.984	ENSCAFG00000023076	PRDM12	99	76.418	Canis_familiaris
ENSAPEG00000015092	prdm12b	92	80.980	ENSCAFG00020024046	PRDM12	99	76.923	Canis_lupus_dingo
ENSAPEG00000015092	prdm12b	92	80.980	ENSCHIG00000025005	PRDM12	99	76.923	Capra_hircus
ENSAPEG00000015092	prdm12b	86	81.902	ENSCPOG00000005901	PRDM12	95	81.902	Cavia_porcellus
ENSAPEG00000015092	prdm12b	92	80.403	ENSCCAG00000037485	PRDM12	99	76.393	Cebus_capucinus
ENSAPEG00000015092	prdm12b	92	80.403	ENSCATG00000020327	PRDM12	99	76.393	Cercocebus_atys
ENSAPEG00000015092	prdm12b	90	82.544	ENSCLAG00000005499	PRDM12	90	81.105	Chinchilla_lanigera
ENSAPEG00000015092	prdm12b	92	80.403	ENSCSAG00000014756	PRDM12	99	76.393	Chlorocebus_sabaeus
ENSAPEG00000015092	prdm12b	100	78.249	ENSCPBG00000022628	PRDM12	99	78.249	Chrysemys_picta_bellii
ENSAPEG00000015092	prdm12b	92	81.268	ENSCGRG00001015005	Prdm12	99	76.781	Cricetulus_griseus_chok1gshd
ENSAPEG00000015092	prdm12b	100	89.655	ENSCVAG00000017166	prdm12b	100	88.859	Cyprinodon_variegatus
ENSAPEG00000015092	prdm12b	100	79.231	ENSCVAG00000000944	-	100	79.231	Cyprinodon_variegatus
ENSAPEG00000015092	prdm12b	100	83.289	ENSDARG00000007430	prdm12b	100	82.228	Danio_rerio
ENSAPEG00000015092	prdm12b	92	80.747	ENSDNOG00000042302	PRDM12	99	76.720	Dasypus_novemcinctus
ENSAPEG00000015092	prdm12b	84	66.366	ENSEBUG00000016780	prdm12b	80	64.088	Eptatretus_burgeri
ENSAPEG00000015092	prdm12b	94	80.170	ENSEASG00005008472	PRDM12	99	76.923	Equus_asinus_asinus
ENSAPEG00000015092	prdm12b	94	80.170	ENSECAG00000005933	PRDM12	99	76.923	Equus_caballus
ENSAPEG00000015092	prdm12b	100	82.199	ENSELUG00000013674	PRDM12	100	82.940	Esox_lucius
ENSAPEG00000015092	prdm12b	100	83.289	ENSELUG00000009905	prdm12b	100	83.024	Esox_lucius
ENSAPEG00000015092	prdm12b	92	80.980	ENSFCAG00000043086	PRDM12	99	76.923	Felis_catus
ENSAPEG00000015092	prdm12b	100	78.249	ENSFALG00000001445	PRDM12	89	77.984	Ficedula_albicollis
ENSAPEG00000015092	prdm12b	100	91.005	ENSFHEG00000003944	prdm12b	100	88.889	Fundulus_heteroclitus
ENSAPEG00000015092	prdm12b	100	77.330	ENSFHEG00000007746	-	100	77.722	Fundulus_heteroclitus
ENSAPEG00000015092	prdm12b	100	84.293	ENSGMOG00000011797	prdm12b	100	83.202	Gadus_morhua
ENSAPEG00000015092	prdm12b	100	78.249	ENSGALG00000003895	PRDM12	99	77.984	Gallus_gallus
ENSAPEG00000015092	prdm12b	100	90.476	ENSGAFG00000010827	prdm12b	99	90.476	Gambusia_affinis
ENSAPEG00000015092	prdm12b	100	89.446	ENSGACG00000016713	prdm12b	99	88.127	Gasterosteus_aculeatus
ENSAPEG00000015092	prdm12b	100	78.249	ENSGAGG00000014083	PRDM12	99	78.249	Gopherus_agassizii
ENSAPEG00000015092	prdm12b	92	80.403	ENSGGOG00000010568	PRDM12	99	75.989	Gorilla_gorilla
ENSAPEG00000015092	prdm12b	100	92.267	ENSHBUG00000022878	prdm12b	100	91.467	Haplochromis_burtoni
ENSAPEG00000015092	prdm12b	100	78.141	ENSHBUG00000022537	-	93	78.643	Haplochromis_burtoni
ENSAPEG00000015092	prdm12b	90	82.544	ENSHGLG00000013939	PRDM12	99	75.926	Heterocephalus_glaber_female
ENSAPEG00000015092	prdm12b	90	87.536	ENSHCOG00000003663	prdm12b	100	80.253	Hippocampus_comes
ENSAPEG00000015092	prdm12b	100	73.351	ENSHCOG00000021167	-	100	71.768	Hippocampus_comes
ENSAPEG00000015092	prdm12b	100	78.342	ENSIPUG00000019544	PRDM12	100	78.342	Ictalurus_punctatus
ENSAPEG00000015092	prdm12b	100	85.561	ENSIPUG00000017053	prdm12b	100	84.881	Ictalurus_punctatus
ENSAPEG00000015092	prdm12b	94	79.944	ENSSTOG00000005986	PRDM12	86	81.395	Ictidomys_tridecemlineatus
ENSAPEG00000015092	prdm12b	90	82.840	ENSJJAG00000005424	Prdm12	98	82.840	Jaculus_jaculus
ENSAPEG00000015092	prdm12b	100	82.759	ENSKMAG00000016921	prdm12b	100	83.498	Kryptolebias_marmoratus
ENSAPEG00000015092	prdm12b	94	79.661	ENSKMAG00000021205	-	94	78.771	Kryptolebias_marmoratus
ENSAPEG00000015092	prdm12b	100	80.628	ENSLBEG00000007776	-	100	80.890	Labrus_bergylta
ENSAPEG00000015092	prdm12b	100	89.529	ENSLBEG00000017769	prdm12b	100	89.529	Labrus_bergylta
ENSAPEG00000015092	prdm12b	100	78.989	ENSLACG00000017560	PRDM12	99	77.926	Latimeria_chalumnae
ENSAPEG00000015092	prdm12b	100	82.292	ENSLOCG00000005429	prdm12b	100	82.552	Lepisosteus_oculatus
ENSAPEG00000015092	prdm12b	90	82.985	ENSLAFG00000006979	PRDM12	90	80.460	Loxodonta_africana
ENSAPEG00000015092	prdm12b	100	75.263	ENSMFAG00000040322	PRDM12	99	75.789	Macaca_fascicularis
ENSAPEG00000015092	prdm12b	92	80.403	ENSMNEG00000037234	PRDM12	99	76.393	Macaca_nemestrina
ENSAPEG00000015092	prdm12b	100	93.158	ENSMAMG00000013212	prdm12b	100	91.842	Mastacembelus_armatus
ENSAPEG00000015092	prdm12b	100	75.377	ENSMAMG00000018988	-	100	75.879	Mastacembelus_armatus
ENSAPEG00000015092	prdm12b	100	77.750	ENSMZEG00005000415	PRDM12	100	78.000	Maylandia_zebra
ENSAPEG00000015092	prdm12b	94	80.563	ENSMGAG00000005438	PRDM12	91	83.432	Meleagris_gallopavo
ENSAPEG00000015092	prdm12b	100	76.984	ENSMAUG00000013040	Prdm12	99	76.455	Mesocricetus_auratus
ENSAPEG00000015092	prdm12b	93	80.342	ENSMICG00000015480	PRDM12	99	76.658	Microcebus_murinus
ENSAPEG00000015092	prdm12b	99	77.480	ENSMOCG00000021026	Prdm12	90	81.686	Microtus_ochrogaster
ENSAPEG00000015092	prdm12b	100	78.515	ENSMODG00000012108	PRDM12	99	78.042	Monodelphis_domestica
ENSAPEG00000015092	prdm12b	100	76.253	ENSMALG00000021901	prdm12b	99	75.198	Monopterus_albus
ENSAPEG00000015092	prdm12b	92	81.268	MGP_CAROLIEiJ_G0023414	Prdm12	99	76.720	Mus_caroli
ENSAPEG00000015092	prdm12b	92	81.268	ENSMUSG00000079466	Prdm12	99	76.720	Mus_musculus
ENSAPEG00000015092	prdm12b	92	81.268	MGP_PahariEiJ_G0024871	Prdm12	99	76.720	Mus_pahari
ENSAPEG00000015092	prdm12b	92	81.268	MGP_SPRETEiJ_G0024331	Prdm12	99	76.720	Mus_spretus
ENSAPEG00000015092	prdm12b	90	82.840	ENSNGAG00000018480	Prdm12	99	76.127	Nannospalax_galili
ENSAPEG00000015092	prdm12b	100	73.560	ENSNBRG00000024312	-	100	73.822	Neolamprologus_brichardi
ENSAPEG00000015092	prdm12b	100	92.328	ENSNBRG00000006727	prdm12b	100	91.270	Neolamprologus_brichardi
ENSAPEG00000015092	prdm12b	100	70.213	ENSMEUG00000003828	PRDM12	99	69.761	Notamacropus_eugenii
ENSAPEG00000015092	prdm12b	90	82.840	ENSOPRG00000008680	PRDM12	98	82.840	Ochotona_princeps
ENSAPEG00000015092	prdm12b	94	79.887	ENSODEG00000016282	PRDM12	62	81.105	Octodon_degus
ENSAPEG00000015092	prdm12b	63	76.151	ENSOANG00000001043	PRDM12	100	75.314	Ornithorhynchus_anatinus
ENSAPEG00000015092	prdm12b	88	78.916	ENSOCUG00000008241	PRDM12	96	82.109	Oryctolagus_cuniculus
ENSAPEG00000015092	prdm12b	100	88.220	ENSORLG00000007114	prdm12b	99	87.927	Oryzias_latipes
ENSAPEG00000015092	prdm12b	100	79.487	ENSORLG00000017558	-	100	79.231	Oryzias_latipes
ENSAPEG00000015092	prdm12b	100	79.795	ENSORLG00020013167	-	100	79.795	Oryzias_latipes_hni
ENSAPEG00000015092	prdm12b	100	88.189	ENSORLG00020019565	prdm12b	99	88.451	Oryzias_latipes_hni
ENSAPEG00000015092	prdm12b	100	88.421	ENSORLG00015007621	prdm12b	99	88.158	Oryzias_latipes_hsok
ENSAPEG00000015092	prdm12b	100	79.487	ENSORLG00015003435	-	100	79.231	Oryzias_latipes_hsok
ENSAPEG00000015092	prdm12b	100	79.534	ENSOMEG00000007762	-	100	79.275	Oryzias_melastigma
ENSAPEG00000015092	prdm12b	100	88.542	ENSOMEG00000004134	prdm12b	99	87.990	Oryzias_melastigma
ENSAPEG00000015092	prdm12b	90	82.840	ENSOGAG00000007557	PRDM12	97	82.840	Otolemur_garnettii
ENSAPEG00000015092	prdm12b	79	80.333	ENSPPAG00000031506	-	99	79.085	Pan_paniscus
ENSAPEG00000015092	prdm12b	98	71.545	ENSPPRG00000023024	PRDM12	91	71.545	Panthera_pardus
ENSAPEG00000015092	prdm12b	92	80.403	ENSPTRG00000021475	PRDM12	99	76.253	Pan_troglodytes
ENSAPEG00000015092	prdm12b	92	80.403	ENSPTRG00000043324	-	99	76.253	Pan_troglodytes
ENSAPEG00000015092	prdm12b	92	80.403	ENSPANG00000025967	PRDM12	99	76.393	Papio_anubis
ENSAPEG00000015092	prdm12b	94	78.151	ENSPKIG00000004305	PRDM12	94	81.791	Paramormyrops_kingsleyae
ENSAPEG00000015092	prdm12b	100	84.085	ENSPKIG00000007228	prdm12b	100	84.615	Paramormyrops_kingsleyae
ENSAPEG00000015092	prdm12b	100	78.515	ENSPSIG00000006739	PRDM12	99	78.515	Pelodiscus_sinensis
ENSAPEG00000015092	prdm12b	100	75.000	ENSPMGG00000002356	-	100	74.490	Periophthalmus_magnuspinnatus
ENSAPEG00000015092	prdm12b	100	90.374	ENSPMGG00000008867	prdm12b	99	90.374	Periophthalmus_magnuspinnatus
ENSAPEG00000015092	prdm12b	96	78.167	ENSPEMG00000009969	Prdm12	91	81.395	Peromyscus_maniculatus_bairdii
ENSAPEG00000015092	prdm12b	100	78.249	ENSPCIG00000024119	PRDM12	99	77.778	Phascolarctos_cinereus
ENSAPEG00000015092	prdm12b	100	89.182	ENSPFOG00000019841	prdm12b	100	88.391	Poecilia_formosa
ENSAPEG00000015092	prdm12b	100	89.764	ENSPLAG00000016626	prdm12b	99	89.764	Poecilia_latipinna
ENSAPEG00000015092	prdm12b	96	89.918	ENSPMEG00000016698	prdm12b	99	89.918	Poecilia_mexicana
ENSAPEG00000015092	prdm12b	95	75.000	ENSPREG00000003211	-	94	74.176	Poecilia_reticulata
ENSAPEG00000015092	prdm12b	100	89.529	ENSPREG00000015073	prdm12b	99	89.529	Poecilia_reticulata
ENSAPEG00000015092	prdm12b	94	80.170	ENSPPYG00000019694	PRDM12	92	82.544	Pongo_abelii
ENSAPEG00000015092	prdm12b	92	80.980	ENSPCOG00000022255	PRDM12	99	77.045	Propithecus_coquereli
ENSAPEG00000015092	prdm12b	92	80.980	ENSPVAG00000001511	PRDM12	99	76.781	Pteropus_vampyrus
ENSAPEG00000015092	prdm12b	100	77.750	ENSPNYG00000013589	-	100	78.000	Pundamilia_nyererei
ENSAPEG00000015092	prdm12b	100	91.777	ENSPNYG00000009607	prdm12b	100	91.247	Pundamilia_nyererei
ENSAPEG00000015092	prdm12b	100	80.263	ENSPNAG00000013396	PRDM12	100	80.263	Pygocentrus_nattereri
ENSAPEG00000015092	prdm12b	100	84.085	ENSPNAG00000024532	prdm12b	100	83.820	Pygocentrus_nattereri
ENSAPEG00000015092	prdm12b	92	81.268	ENSRNOG00000009218	Prdm12	99	76.720	Rattus_norvegicus
ENSAPEG00000015092	prdm12b	87	82.424	ENSRBIG00000042712	PRDM12	88	81.737	Rhinopithecus_bieti
ENSAPEG00000015092	prdm12b	89	82.635	ENSRROG00000043554	PRDM12	99	82.635	Rhinopithecus_roxellana
ENSAPEG00000015092	prdm12b	100	78.042	ENSSHAG00000015972	PRDM12	99	77.309	Sarcophilus_harrisii
ENSAPEG00000015092	prdm12b	100	86.889	ENSSMAG00000003754	prdm12b	100	86.224	Scophthalmus_maximus
ENSAPEG00000015092	prdm12b	100	93.750	ENSSDUG00000023498	prdm12b	100	93.750	Seriola_dumerili
ENSAPEG00000015092	prdm12b	100	81.137	ENSSDUG00000019071	-	100	81.606	Seriola_dumerili
ENSAPEG00000015092	prdm12b	100	77.660	ENSSLDG00000013562	-	100	77.394	Seriola_lalandi_dorsalis
ENSAPEG00000015092	prdm12b	100	91.927	ENSSLDG00000009557	prdm12b	100	90.885	Seriola_lalandi_dorsalis
ENSAPEG00000015092	prdm12b	100	78.191	ENSSPUG00000013424	PRDM12	99	77.926	Sphenodon_punctatus
ENSAPEG00000015092	prdm12b	100	73.316	ENSSPAG00000022420	-	100	72.585	Stegastes_partitus
ENSAPEG00000015092	prdm12b	100	96.032	ENSSPAG00000018824	prdm12b	100	96.032	Stegastes_partitus
ENSAPEG00000015092	prdm12b	92	80.980	ENSSSCG00000005703	PRDM12	99	76.923	Sus_scrofa
ENSAPEG00000015092	prdm12b	100	78.571	ENSTRUG00000013239	-	100	78.571	Takifugu_rubripes
ENSAPEG00000015092	prdm12b	100	90.160	ENSTRUG00000018659	prdm12b	100	88.830	Takifugu_rubripes
ENSAPEG00000015092	prdm12b	100	76.393	ENSTNIG00000005859	-	99	75.597	Tetraodon_nigroviridis
ENSAPEG00000015092	prdm12b	100	89.096	ENSTNIG00000009020	prdm12b	99	87.766	Tetraodon_nigroviridis
ENSAPEG00000015092	prdm12b	92	80.980	ENSUAMG00000009653	PRDM12	90	82.840	Ursus_americanus
ENSAPEG00000015092	prdm12b	90	82.840	ENSVVUG00000027662	PRDM12	79	81.395	Vulpes_vulpes
ENSAPEG00000015092	prdm12b	100	91.223	ENSXCOG00000002836	prdm12b	99	90.957	Xiphophorus_couchianus
ENSAPEG00000015092	prdm12b	100	89.974	ENSXMAG00000005537	prdm12b	100	89.710	Xiphophorus_maculatus
ENSAPEG00000015092	prdm12b	100	77.114	ENSXMAG00000028012	-	100	75.871	Xiphophorus_maculatus