EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000015209 (Gene tree)
Gene ID: -
Gene Symbol: trub1
Alias: zgc:195155
Full Name: TruB pseudouridine (psi) synthase family member 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 10161 bases
Position: chr19:12069627-12079787
Accession: ZDB-GENE-080723-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000021326	TruB_N	PF01509.18	1.3e-47	1	1
ENSAPEP00000021312	TruB_N	PF01509.18	1.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000021878	-	2719	-	ENSAPEP00000021312	301 (aa)	-	-
ENSAPET00000021892	-	2641	-	ENSAPEP00000021326	275 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000015209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000015209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000015209	trub1	89	67.886	ENSG00000165832	TRUB1	70	67.886	Homo_sapiens
ENSAPEG00000015209	trub1	100	97.818	ENSAPOG00000020565	trub1	100	97.818	Acanthochromis_polyacanthus
ENSAPEG00000015209	trub1	89	67.339	ENSAMEG00000014931	TRUB1	70	67.339	Ailuropoda_melanoleuca
ENSAPEG00000015209	trub1	96	84.906	ENSACIG00000003060	trub1	86	94.220	Amphilophus_citrinellus
ENSAPEG00000015209	trub1	100	99.273	ENSAOCG00000017188	trub1	100	99.273	Amphiprion_ocellaris
ENSAPEG00000015209	trub1	89	89.388	ENSATEG00000023291	trub1	88	89.388	Anabas_testudineus
ENSAPEG00000015209	trub1	89	69.262	ENSAPLG00000006808	TRUB1	87	69.262	Anas_platyrhynchos
ENSAPEG00000015209	trub1	89	67.347	ENSACAG00000009282	TRUB1	88	67.347	Anolis_carolinensis
ENSAPEG00000015209	trub1	89	67.886	ENSANAG00000022870	TRUB1	70	67.886	Aotus_nancymaae
ENSAPEG00000015209	trub1	99	87.132	ENSACLG00000000823	trub1	94	88.931	Astatotilapia_calliptera
ENSAPEG00000015209	trub1	91	78.088	ENSAMXG00000015845	trub1	83	78.313	Astyanax_mexicanus
ENSAPEG00000015209	trub1	89	69.106	ENSBTAG00000012955	TRUB1	70	69.106	Bos_taurus
ENSAPEG00000015209	trub1	89	67.886	ENSCJAG00000047815	TRUB1	70	67.886	Callithrix_jacchus
ENSAPEG00000015209	trub1	89	68.293	ENSCAFG00000011688	TRUB1	70	68.293	Canis_familiaris
ENSAPEG00000015209	trub1	89	68.293	ENSCAFG00020013237	TRUB1	70	68.293	Canis_lupus_dingo
ENSAPEG00000015209	trub1	89	68.293	ENSCHIG00000020884	TRUB1	74	68.293	Capra_hircus
ENSAPEG00000015209	trub1	89	67.886	ENSTSYG00000000446	TRUB1	70	67.886	Carlito_syrichta
ENSAPEG00000015209	trub1	77	61.321	ENSCAPG00000017088	TRUB1	82	61.321	Cavia_aperea
ENSAPEG00000015209	trub1	71	63.590	ENSCPOG00000030129	-	75	63.590	Cavia_porcellus
ENSAPEG00000015209	trub1	70	64.062	ENSCPOG00000040236	-	77	64.062	Cavia_porcellus
ENSAPEG00000015209	trub1	89	67.886	ENSCCAG00000028842	TRUB1	70	67.886	Cebus_capucinus
ENSAPEG00000015209	trub1	89	67.886	ENSCATG00000033431	TRUB1	70	67.886	Cercocebus_atys
ENSAPEG00000015209	trub1	67	64.481	ENSCLAG00000008664	TRUB1	75	64.481	Chinchilla_lanigera
ENSAPEG00000015209	trub1	89	67.886	ENSCSAG00000004891	TRUB1	70	67.886	Chlorocebus_sabaeus
ENSAPEG00000015209	trub1	88	60.494	ENSCHOG00000011931	TRUB1	70	60.494	Choloepus_hoffmanni
ENSAPEG00000015209	trub1	89	71.020	ENSCPBG00000003051	TRUB1	84	71.020	Chrysemys_picta_bellii
ENSAPEG00000015209	trub1	89	67.886	ENSCANG00000029445	TRUB1	70	67.886	Colobus_angolensis_palliatus
ENSAPEG00000015209	trub1	82	66.228	ENSCGRG00001016772	-	71	69.302	Cricetulus_griseus_chok1gshd
ENSAPEG00000015209	trub1	91	58.268	ENSCGRG00001010322	-	70	56.705	Cricetulus_griseus_chok1gshd
ENSAPEG00000015209	trub1	87	68.619	ENSCGRG00000010806	Trub1	75	67.480	Cricetulus_griseus_crigri
ENSAPEG00000015209	trub1	95	78.161	ENSCSEG00000011261	trub1	83	78.988	Cynoglossus_semilaevis
ENSAPEG00000015209	trub1	93	82.031	ENSCVAG00000008791	trub1	78	82.283	Cyprinodon_variegatus
ENSAPEG00000015209	trub1	99	71.533	ENSDARG00000053805	trub1	99	85.294	Danio_rerio
ENSAPEG00000015209	trub1	89	66.260	ENSDNOG00000001069	TRUB1	70	66.260	Dasypus_novemcinctus
ENSAPEG00000015209	trub1	87	67.782	ENSDORG00000010431	Trub1	71	66.667	Dipodomys_ordii
ENSAPEG00000015209	trub1	70	65.116	ENSETEG00000009183	TRUB1	51	65.116	Echinops_telfairi
ENSAPEG00000015209	trub1	89	67.886	ENSEASG00005014739	TRUB1	70	67.886	Equus_asinus_asinus
ENSAPEG00000015209	trub1	89	67.886	ENSECAG00000007177	TRUB1	70	67.886	Equus_caballus
ENSAPEG00000015209	trub1	89	59.756	ENSEEUG00000013993	TRUB1	73	57.854	Erinaceus_europaeus
ENSAPEG00000015209	trub1	98	78.439	ENSELUG00000000502	trub1	91	80.077	Esox_lucius
ENSAPEG00000015209	trub1	93	66.148	ENSFCAG00000031927	TRUB1	70	68.293	Felis_catus
ENSAPEG00000015209	trub1	79	69.444	ENSFALG00000002232	TRUB1	83	69.444	Ficedula_albicollis
ENSAPEG00000015209	trub1	67	65.574	ENSFDAG00000008140	TRUB1	75	65.574	Fukomys_damarensis
ENSAPEG00000015209	trub1	99	81.319	ENSFHEG00000004016	trub1	90	83.588	Fundulus_heteroclitus
ENSAPEG00000015209	trub1	90	67.611	ENSGALG00000009091	TRUB1	87	67.611	Gallus_gallus
ENSAPEG00000015209	trub1	93	82.031	ENSGAFG00000009193	trub1	89	80.859	Gambusia_affinis
ENSAPEG00000015209	trub1	76	87.500	ENSGACG00000015387	trub1	96	90.256	Gasterosteus_aculeatus
ENSAPEG00000015209	trub1	89	71.020	ENSGAGG00000009758	TRUB1	70	71.020	Gopherus_agassizii
ENSAPEG00000015209	trub1	89	67.886	ENSGGOG00000004583	TRUB1	70	67.886	Gorilla_gorilla
ENSAPEG00000015209	trub1	99	87.868	ENSHBUG00000016787	trub1	94	89.695	Haplochromis_burtoni
ENSAPEG00000015209	trub1	89	66.667	ENSHGLG00000015314	TRUB1	70	66.667	Heterocephalus_glaber_female
ENSAPEG00000015209	trub1	67	65.027	ENSHGLG00100009183	TRUB1	77	65.027	Heterocephalus_glaber_male
ENSAPEG00000015209	trub1	98	84.015	ENSHCOG00000017877	trub1	94	85.824	Hippocampus_comes
ENSAPEG00000015209	trub1	91	77.510	ENSIPUG00000017559	trub1	87	77.823	Ictalurus_punctatus
ENSAPEG00000015209	trub1	89	67.480	ENSSTOG00000003641	TRUB1	73	67.480	Ictidomys_tridecemlineatus
ENSAPEG00000015209	trub1	94	64.368	ENSJJAG00000011800	Trub1	72	66.667	Jaculus_jaculus
ENSAPEG00000015209	trub1	99	85.294	ENSKMAG00000006232	trub1	94	87.023	Kryptolebias_marmoratus
ENSAPEG00000015209	trub1	96	88.679	ENSLBEG00000026722	trub1	92	88.931	Labrus_bergylta
ENSAPEG00000015209	trub1	94	69.884	ENSLACG00000014885	TRUB1	86	69.884	Latimeria_chalumnae
ENSAPEG00000015209	trub1	95	74.427	ENSLOCG00000012979	trub1	88	74.427	Lepisosteus_oculatus
ENSAPEG00000015209	trub1	91	66.800	ENSLAFG00000015452	TRUB1	71	66.800	Loxodonta_africana
ENSAPEG00000015209	trub1	89	67.886	ENSMFAG00000031767	TRUB1	70	67.886	Macaca_fascicularis
ENSAPEG00000015209	trub1	89	67.886	ENSMMUG00000001902	TRUB1	70	67.886	Macaca_mulatta
ENSAPEG00000015209	trub1	89	62.602	ENSMNEG00000044646	TRUB1	69	63.008	Macaca_nemestrina
ENSAPEG00000015209	trub1	89	67.886	ENSMLEG00000042655	TRUB1	70	67.886	Mandrillus_leucophaeus
ENSAPEG00000015209	trub1	99	87.132	ENSMZEG00005024095	trub1	94	88.931	Maylandia_zebra
ENSAPEG00000015209	trub1	90	68.016	ENSMGAG00000011135	TRUB1	85	68.016	Meleagris_gallopavo
ENSAPEG00000015209	trub1	87	66.527	ENSMAUG00000011101	Trub1	72	65.447	Mesocricetus_auratus
ENSAPEG00000015209	trub1	89	67.480	ENSMICG00000016324	TRUB1	70	67.480	Microcebus_murinus
ENSAPEG00000015209	trub1	87	68.908	ENSMOCG00000017759	Trub1	74	67.755	Microtus_ochrogaster
ENSAPEG00000015209	trub1	89	69.262	ENSMODG00000009676	TRUB1	69	68.273	Monodelphis_domestica
ENSAPEG00000015209	trub1	88	68.595	MGP_CAROLIEiJ_G0023100	Trub1	79	65.816	Mus_caroli
ENSAPEG00000015209	trub1	88	67.769	ENSMUSG00000025086	Trub1	79	64.796	Mus_musculus
ENSAPEG00000015209	trub1	89	67.073	MGP_PahariEiJ_G0014588	Trub1	73	67.073	Mus_pahari
ENSAPEG00000015209	trub1	88	67.769	MGP_SPRETEiJ_G0024021	Trub1	79	64.796	Mus_spretus
ENSAPEG00000015209	trub1	89	68.293	ENSMPUG00000003556	TRUB1	70	68.293	Mustela_putorius_furo
ENSAPEG00000015209	trub1	89	67.073	ENSMLUG00000017686	TRUB1	72	67.073	Myotis_lucifugus
ENSAPEG00000015209	trub1	89	67.073	ENSNGAG00000018682	Trub1	71	67.073	Nannospalax_galili
ENSAPEG00000015209	trub1	92	91.700	ENSNBRG00000023393	trub1	89	91.600	Neolamprologus_brichardi
ENSAPEG00000015209	trub1	89	67.886	ENSNLEG00000016345	TRUB1	70	67.886	Nomascus_leucogenys
ENSAPEG00000015209	trub1	73	69.652	ENSMEUG00000006603	TRUB1	76	68.447	Notamacropus_eugenii
ENSAPEG00000015209	trub1	89	67.480	ENSOPRG00000009371	TRUB1	72	67.480	Ochotona_princeps
ENSAPEG00000015209	trub1	89	65.854	ENSODEG00000010854	TRUB1	70	65.854	Octodon_degus
ENSAPEG00000015209	trub1	98	88.476	ENSONIG00000007249	trub1	95	89.313	Oreochromis_niloticus
ENSAPEG00000015209	trub1	90	68.016	ENSOANG00000001556	TRUB1	82	68.000	Ornithorhynchus_anatinus
ENSAPEG00000015209	trub1	89	67.073	ENSOCUG00000009456	TRUB1	71	67.073	Oryctolagus_cuniculus
ENSAPEG00000015209	trub1	99	81.752	ENSORLG00000029719	trub1	93	85.328	Oryzias_latipes
ENSAPEG00000015209	trub1	99	81.752	ENSORLG00020016767	trub1	92	85.328	Oryzias_latipes_hni
ENSAPEG00000015209	trub1	99	81.752	ENSORLG00015014728	trub1	93	85.328	Oryzias_latipes_hsok
ENSAPEG00000015209	trub1	94	84.170	ENSOMEG00000014556	trub1	91	84.170	Oryzias_melastigma
ENSAPEG00000015209	trub1	89	67.886	ENSOGAG00000015895	TRUB1	70	67.886	Otolemur_garnettii
ENSAPEG00000015209	trub1	89	66.798	ENSOARG00000015591	TRUB1	72	66.798	Ovis_aries
ENSAPEG00000015209	trub1	89	67.886	ENSPPAG00000043645	TRUB1	70	67.886	Pan_paniscus
ENSAPEG00000015209	trub1	93	66.148	ENSPPRG00000007096	TRUB1	70	68.293	Panthera_pardus
ENSAPEG00000015209	trub1	93	66.148	ENSPTIG00000006378	TRUB1	70	68.293	Panthera_tigris_altaica
ENSAPEG00000015209	trub1	89	67.886	ENSPTRG00000002964	TRUB1	70	67.886	Pan_troglodytes
ENSAPEG00000015209	trub1	89	67.886	ENSPANG00000020712	TRUB1	70	67.886	Papio_anubis
ENSAPEG00000015209	trub1	65	74.603	ENSPKIG00000003852	trub1	72	80.952	Paramormyrops_kingsleyae
ENSAPEG00000015209	trub1	91	70.000	ENSPSIG00000012877	TRUB1	86	70.000	Pelodiscus_sinensis
ENSAPEG00000015209	trub1	95	81.226	ENSPMGG00000000075	trub1	92	81.226	Periophthalmus_magnuspinnatus
ENSAPEG00000015209	trub1	94	66.284	ENSPEMG00000011156	Trub1	72	68.699	Peromyscus_maniculatus_bairdii
ENSAPEG00000015209	trub1	89	69.262	ENSPCIG00000009729	TRUB1	68	68.273	Phascolarctos_cinereus
ENSAPEG00000015209	trub1	98	80.297	ENSPFOG00000009950	trub1	94	83.268	Poecilia_formosa
ENSAPEG00000015209	trub1	99	80.220	ENSPLAG00000013855	trub1	91	83.142	Poecilia_latipinna
ENSAPEG00000015209	trub1	99	80.586	ENSPMEG00000009064	trub1	94	83.525	Poecilia_mexicana
ENSAPEG00000015209	trub1	99	80.586	ENSPREG00000003343	trub1	94	83.525	Poecilia_reticulata
ENSAPEG00000015209	trub1	89	67.480	ENSPPYG00000002676	TRUB1	70	67.480	Pongo_abelii
ENSAPEG00000015209	trub1	95	59.387	ENSPCAG00000008427	TRUB1	71	60.800	Procavia_capensis
ENSAPEG00000015209	trub1	89	62.195	ENSPCOG00000024360	TRUB1	69	61.382	Propithecus_coquereli
ENSAPEG00000015209	trub1	73	68.317	ENSPVAG00000007575	TRUB1	77	68.317	Pteropus_vampyrus
ENSAPEG00000015209	trub1	99	87.500	ENSPNYG00000018614	trub1	94	89.313	Pundamilia_nyererei
ENSAPEG00000015209	trub1	93	66.537	ENSPNAG00000006881	trub1	80	80.233	Pygocentrus_nattereri
ENSAPEG00000015209	trub1	89	66.260	ENSRNOG00000017321	Trub1	72	66.260	Rattus_norvegicus
ENSAPEG00000015209	trub1	89	60.163	ENSRBIG00000033423	TRUB1	68	58.871	Rhinopithecus_bieti
ENSAPEG00000015209	trub1	89	67.886	ENSRROG00000033902	TRUB1	70	67.886	Rhinopithecus_roxellana
ENSAPEG00000015209	trub1	89	67.886	ENSSBOG00000024237	TRUB1	70	67.886	Saimiri_boliviensis_boliviensis
ENSAPEG00000015209	trub1	77	69.767	ENSSHAG00000009346	TRUB1	72	70.093	Sarcophilus_harrisii
ENSAPEG00000015209	trub1	98	74.909	ENSSFOG00015022124	trub1	89	77.692	Scleropages_formosus
ENSAPEG00000015209	trub1	100	86.545	ENSSMAG00000001020	trub1	93	89.313	Scophthalmus_maximus
ENSAPEG00000015209	trub1	96	89.434	ENSSDUG00000016414	trub1	94	89.695	Seriola_dumerili
ENSAPEG00000015209	trub1	100	85.971	ENSSLDG00000015486	trub1	94	89.313	Seriola_lalandi_dorsalis
ENSAPEG00000015209	trub1	95	67.681	ENSSPUG00000001642	TRUB1	90	67.681	Sphenodon_punctatus
ENSAPEG00000015209	trub1	100	93.885	ENSSPAG00000001217	trub1	94	96.183	Stegastes_partitus
ENSAPEG00000015209	trub1	89	67.480	ENSSSCG00000010653	TRUB1	72	67.480	Sus_scrofa
ENSAPEG00000015209	trub1	89	68.980	ENSTGUG00000010971	TRUB1	90	67.194	Taeniopygia_guttata
ENSAPEG00000015209	trub1	81	58.108	ENSTBEG00000002880	TRUB1	83	58.962	Tupaia_belangeri
ENSAPEG00000015209	trub1	73	67.822	ENSTTRG00000005767	TRUB1	77	67.822	Tursiops_truncatus
ENSAPEG00000015209	trub1	89	68.293	ENSUAMG00000024876	TRUB1	70	68.293	Ursus_americanus
ENSAPEG00000015209	trub1	89	68.293	ENSUMAG00000002411	TRUB1	73	68.293	Ursus_maritimus
ENSAPEG00000015209	trub1	89	68.293	ENSVPAG00000005507	TRUB1	70	68.293	Vicugna_pacos
ENSAPEG00000015209	trub1	89	68.293	ENSVVUG00000010085	TRUB1	59	68.293	Vulpes_vulpes
ENSAPEG00000015209	trub1	93	67.315	ENSXETG00000023828	trub1	88	68.980	Xenopus_tropicalis
ENSAPEG00000015209	trub1	88	85.537	ENSXCOG00000017847	trub1	86	85.537	Xiphophorus_couchianus
ENSAPEG00000015209	trub1	99	80.586	ENSXMAG00000014701	trub1	94	83.525	Xiphophorus_maculatus