EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000015917 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 3593 bases
Position: chr18:28571384-28574976
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000022316	RRM_1	PF00076.22	1.2e-11	1	1
ENSAPEP00000022323	RRM_1	PF00076.22	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000022907	-	415	-	ENSAPEP00000022316	99 (aa)	-	UPI000C31577C
ENSAPET00000022914	-	462	-	ENSAPEP00000022323	110 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000015917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000015917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000015917	slirp	100	100.000	ENSAPEG00000015719	-	100	100.000
ENSAPEG00000015917	slirp	80	31.579	ENSAPEG00000002224	-	65	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000015917	slirp	90	50.562	ENSG00000119705	SLIRP	93	59.155	Homo_sapiens
ENSAPEG00000015917	slirp	99	87.755	ENSAPOG00000001298	slirp	98	87.755	Acanthochromis_polyacanthus
ENSAPEG00000015917	slirp	71	60.000	ENSAMEG00000003975	SLIRP	77	60.000	Ailuropoda_melanoleuca
ENSAPEG00000015917	slirp	100	84.848	ENSACIG00000023083	slirp	98	84.848	Amphilophus_citrinellus
ENSAPEG00000015917	slirp	100	100.000	ENSAOCG00000006342	slirp	100	100.000	Amphiprion_ocellaris
ENSAPEG00000015917	slirp	99	75.510	ENSATEG00000013525	slirp	98	75.510	Anabas_testudineus
ENSAPEG00000015917	slirp	97	63.542	ENSAMXG00000018693	slirp	96	63.542	Astyanax_mexicanus
ENSAPEG00000015917	slirp	75	59.459	ENSCJAG00000016946	SLIRP	73	57.353	Callithrix_jacchus
ENSAPEG00000015917	slirp	90	53.846	ENSCAFG00020015876	-	82	53.846	Canis_lupus_dingo
ENSAPEG00000015917	slirp	76	57.333	ENSCCAG00000030130	SLIRP	69	57.333	Cebus_capucinus
ENSAPEG00000015917	slirp	77	56.579	ENSCATG00000036327	SLIRP	72	58.209	Cercocebus_atys
ENSAPEG00000015917	slirp	89	48.864	ENSCSAG00000011736	SLIRP	81	48.864	Chlorocebus_sabaeus
ENSAPEG00000015917	slirp	79	62.821	ENSCPBG00000026327	SLIRP	79	62.821	Chrysemys_picta_bellii
ENSAPEG00000015917	slirp	68	61.194	ENSCANG00000032892	SLIRP	69	60.294	Colobus_angolensis_palliatus
ENSAPEG00000015917	slirp	73	52.778	ENSCGRG00001024068	Slirp	65	52.778	Cricetulus_griseus_chok1gshd
ENSAPEG00000015917	slirp	73	52.778	ENSCGRG00000017440	Slirp	65	52.778	Cricetulus_griseus_crigri
ENSAPEG00000015917	slirp	93	62.366	ENSCSEG00000015766	slirp	95	62.366	Cynoglossus_semilaevis
ENSAPEG00000015917	slirp	89	76.136	ENSCVAG00000012504	slirp	84	76.136	Cyprinodon_variegatus
ENSAPEG00000015917	slirp	95	76.596	ENSDARG00000097753	slirp	93	77.083	Danio_rerio
ENSAPEG00000015917	slirp	86	47.059	ENSDNOG00000007721	SLIRP	78	46.512	Dasypus_novemcinctus
ENSAPEG00000015917	slirp	90	52.222	ENSDORG00000012379	Slirp	81	52.222	Dipodomys_ordii
ENSAPEG00000015917	slirp	90	48.315	ENSETEG00000010345	SLIRP	81	48.315	Echinops_telfairi
ENSAPEG00000015917	slirp	86	58.140	ENSEASG00005020193	SLIRP	77	58.140	Equus_asinus_asinus
ENSAPEG00000015917	slirp	89	50.000	ENSEEUG00000007257	SLIRP	87	50.000	Erinaceus_europaeus
ENSAPEG00000015917	slirp	95	73.404	ENSELUG00000016800	slirp	93	73.404	Esox_lucius
ENSAPEG00000015917	slirp	77	61.842	ENSFCAG00000036326	SLIRP	82	58.537	Felis_catus
ENSAPEG00000015917	slirp	79	58.974	ENSFALG00000012583	SLIRP	85	53.333	Ficedula_albicollis
ENSAPEG00000015917	slirp	86	55.814	ENSFDAG00000008347	SLIRP	76	55.814	Fukomys_damarensis
ENSAPEG00000015917	slirp	79	78.205	ENSFHEG00000004709	slirp	85	78.205	Fundulus_heteroclitus
ENSAPEG00000015917	slirp	97	73.958	ENSGMOG00000016948	slirp	92	73.958	Gadus_morhua
ENSAPEG00000015917	slirp	93	51.064	ENSGALG00000031238	SLIRP	95	51.064	Gallus_gallus
ENSAPEG00000015917	slirp	99	75.510	ENSGAFG00000010998	slirp	98	75.510	Gambusia_affinis
ENSAPEG00000015917	slirp	79	84.615	ENSGACG00000020137	slirp	91	84.615	Gasterosteus_aculeatus
ENSAPEG00000015917	slirp	99	61.616	ENSGAGG00000009953	SLIRP	68	61.616	Gopherus_agassizii
ENSAPEG00000015917	slirp	90	50.562	ENSGGOG00000011059	-	73	60.294	Gorilla_gorilla
ENSAPEG00000015917	slirp	86	50.000	ENSHGLG00000018491	SLIRP	78	51.685	Heterocephalus_glaber_female
ENSAPEG00000015917	slirp	86	50.000	ENSHGLG00100014153	SLIRP	78	51.685	Heterocephalus_glaber_male
ENSAPEG00000015917	slirp	94	84.946	ENSHCOG00000006795	slirp	94	84.946	Hippocampus_comes
ENSAPEG00000015917	slirp	97	73.958	ENSIPUG00000010214	SLIRP	96	73.958	Ictalurus_punctatus
ENSAPEG00000015917	slirp	87	54.023	ENSSTOG00000034316	SLIRP	78	54.023	Ictidomys_tridecemlineatus
ENSAPEG00000015917	slirp	99	67.347	ENSKMAG00000002038	slirp	94	67.347	Kryptolebias_marmoratus
ENSAPEG00000015917	slirp	99	67.347	ENSLBEG00000007564	slirp	98	67.347	Labrus_bergylta
ENSAPEG00000015917	slirp	96	73.684	ENSLACG00000013434	SLIRP	91	73.684	Latimeria_chalumnae
ENSAPEG00000015917	slirp	89	48.864	ENSMFAG00000042960	SLIRP	73	57.353	Macaca_fascicularis
ENSAPEG00000015917	slirp	85	53.571	ENSMMUG00000029256	SLIRP	73	57.353	Macaca_mulatta
ENSAPEG00000015917	slirp	89	48.864	ENSMNEG00000028921	SLIRP	73	57.353	Macaca_nemestrina
ENSAPEG00000015917	slirp	91	50.000	ENSMLEG00000043644	SLIRP	80	50.000	Mandrillus_leucophaeus
ENSAPEG00000015917	slirp	100	86.869	ENSMZEG00005004617	slirp	100	86.869	Maylandia_zebra
ENSAPEG00000015917	slirp	91	47.778	ENSMAUG00000003857	Slirp	81	47.778	Mesocricetus_auratus
ENSAPEG00000015917	slirp	72	61.972	ENSMICG00000012080	SLIRP	76	55.952	Microcebus_murinus
ENSAPEG00000015917	slirp	76	54.667	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSAPEG00000015917	slirp	99	83.673	ENSMMOG00000018268	slirp	98	83.673	Mola_mola
ENSAPEG00000015917	slirp	71	58.571	ENSMODG00000005207	-	99	58.571	Monodelphis_domestica
ENSAPEG00000015917	slirp	98	75.258	ENSMALG00000012581	slirp	97	75.258	Monopterus_albus
ENSAPEG00000015917	slirp	87	51.724	MGP_CAROLIEiJ_G0017995	Slirp	81	51.724	Mus_caroli
ENSAPEG00000015917	slirp	90	51.111	ENSMUSG00000021040	Slirp	80	51.111	Mus_musculus
ENSAPEG00000015917	slirp	90	51.111	MGP_SPRETEiJ_G0018840	Slirp	80	51.111	Mus_spretus
ENSAPEG00000015917	slirp	74	64.384	ENSMLUG00000024998	-	66	64.384	Myotis_lucifugus
ENSAPEG00000015917	slirp	84	60.241	ENSMLUG00000029544	-	73	60.241	Myotis_lucifugus
ENSAPEG00000015917	slirp	87	48.276	ENSNGAG00000016363	Slirp	84	48.276	Nannospalax_galili
ENSAPEG00000015917	slirp	90	47.191	ENSNLEG00000027238	-	80	55.714	Nomascus_leucogenys
ENSAPEG00000015917	slirp	90	47.191	ENSNLEG00000032459	-	82	47.191	Nomascus_leucogenys
ENSAPEG00000015917	slirp	89	52.222	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSAPEG00000015917	slirp	100	85.859	ENSONIG00000011692	slirp	100	85.859	Oreochromis_niloticus
ENSAPEG00000015917	slirp	90	54.945	ENSOANG00000022366	SLIRP	82	54.945	Ornithorhynchus_anatinus
ENSAPEG00000015917	slirp	99	81.633	ENSORLG00000010761	slirp	76	81.633	Oryzias_latipes
ENSAPEG00000015917	slirp	99	80.612	ENSORLG00020022188	slirp	98	80.612	Oryzias_latipes_hni
ENSAPEG00000015917	slirp	99	81.633	ENSORLG00015020171	slirp	97	81.633	Oryzias_latipes_hsok
ENSAPEG00000015917	slirp	99	80.612	ENSOMEG00000019321	slirp	98	80.612	Oryzias_melastigma
ENSAPEG00000015917	slirp	87	56.977	ENSPPAG00000040710	-	78	56.977	Pan_paniscus
ENSAPEG00000015917	slirp	77	61.842	ENSPPRG00000014350	SLIRP	82	58.537	Panthera_pardus
ENSAPEG00000015917	slirp	77	61.842	ENSPTIG00000014196	SLIRP	82	58.537	Panthera_tigris_altaica
ENSAPEG00000015917	slirp	87	55.814	ENSPTRG00000030691	SLIRP	80	55.814	Pan_troglodytes
ENSAPEG00000015917	slirp	75	58.108	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSAPEG00000015917	slirp	70	69.565	ENSPKIG00000008831	slirp	68	69.565	Paramormyrops_kingsleyae
ENSAPEG00000015917	slirp	79	76.923	ENSPMGG00000010541	slirp	97	74.118	Periophthalmus_magnuspinnatus
ENSAPEG00000015917	slirp	89	46.591	ENSPEMG00000013234	Slirp	77	46.591	Peromyscus_maniculatus_bairdii
ENSAPEG00000015917	slirp	85	53.571	ENSPMAG00000009355	slirp	93	53.571	Petromyzon_marinus
ENSAPEG00000015917	slirp	79	53.846	ENSPCIG00000026842	-	84	53.846	Phascolarctos_cinereus
ENSAPEG00000015917	slirp	98	75.258	ENSPFOG00000006758	slirp	97	75.258	Poecilia_formosa
ENSAPEG00000015917	slirp	98	76.289	ENSPLAG00000011140	slirp	97	76.289	Poecilia_latipinna
ENSAPEG00000015917	slirp	98	75.258	ENSPMEG00000019535	slirp	97	75.258	Poecilia_mexicana
ENSAPEG00000015917	slirp	98	75.258	ENSPREG00000011673	slirp	97	75.258	Poecilia_reticulata
ENSAPEG00000015917	slirp	86	57.647	ENSPPYG00000006030	SLIRP	78	56.977	Pongo_abelii
ENSAPEG00000015917	slirp	78	58.442	ENSPCOG00000015159	SLIRP	76	54.762	Propithecus_coquereli
ENSAPEG00000015917	slirp	97	82.292	ENSPNAG00000008633	slirp	97	82.292	Pygocentrus_nattereri
ENSAPEG00000015917	slirp	86	51.765	ENSRBIG00000035817	-	78	51.765	Rhinopithecus_bieti
ENSAPEG00000015917	slirp	66	58.462	ENSRBIG00000031396	-	65	58.462	Rhinopithecus_bieti
ENSAPEG00000015917	slirp	68	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSAPEG00000015917	slirp	89	53.409	ENSRBIG00000032222	-	81	53.409	Rhinopithecus_bieti
ENSAPEG00000015917	slirp	66	60.000	ENSRROG00000035604	-	65	60.000	Rhinopithecus_roxellana
ENSAPEG00000015917	slirp	68	59.701	ENSRROG00000017133	-	71	58.824	Rhinopithecus_roxellana
ENSAPEG00000015917	slirp	72	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSAPEG00000015917	slirp	89	53.409	ENSRROG00000036656	-	81	53.409	Rhinopithecus_roxellana
ENSAPEG00000015917	slirp	82	55.556	ENSSBOG00000020014	SLIRP	78	58.667	Saimiri_boliviensis_boliviensis
ENSAPEG00000015917	slirp	97	67.708	ENSSFOG00015011165	slirp	96	67.708	Scleropages_formosus
ENSAPEG00000015917	slirp	99	53.000	ENSSMAG00000012930	slirp	98	53.000	Scophthalmus_maximus
ENSAPEG00000015917	slirp	99	82.653	ENSSDUG00000021883	slirp	64	82.653	Seriola_dumerili
ENSAPEG00000015917	slirp	99	82.653	ENSSLDG00000023136	slirp	89	82.653	Seriola_lalandi_dorsalis
ENSAPEG00000015917	slirp	78	64.935	ENSSPUG00000009346	SLIRP	79	64.935	Sphenodon_punctatus
ENSAPEG00000015917	slirp	99	75.510	ENSSPAG00000013477	slirp	98	75.510	Stegastes_partitus
ENSAPEG00000015917	slirp	87	56.322	ENSSSCG00000028167	SLIRP	78	56.322	Sus_scrofa
ENSAPEG00000015917	slirp	79	57.692	ENSTGUG00000012337	SLIRP	88	53.763	Taeniopygia_guttata
ENSAPEG00000015917	slirp	97	73.196	ENSTRUG00000020127	slirp	96	73.196	Takifugu_rubripes
ENSAPEG00000015917	slirp	89	56.667	ENSUAMG00000022445	SLIRP	80	56.667	Ursus_americanus
ENSAPEG00000015917	slirp	87	57.955	ENSUMAG00000007166	SLIRP	78	57.955	Ursus_maritimus
ENSAPEG00000015917	slirp	90	52.809	ENSVPAG00000001781	SLIRP	81	52.809	Vicugna_pacos
ENSAPEG00000015917	slirp	89	54.945	ENSVVUG00000004436	SLIRP	81	54.945	Vulpes_vulpes
ENSAPEG00000015917	slirp	80	69.620	ENSXETG00000030343	SLIRP	89	69.620	Xenopus_tropicalis
ENSAPEG00000015917	slirp	99	74.490	ENSXCOG00000009422	slirp	98	74.490	Xiphophorus_couchianus
ENSAPEG00000015917	slirp	99	76.531	ENSXMAG00000015655	slirp	98	76.531	Xiphophorus_maculatus