EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000016069 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 18912 bases
Position: chr13:7939924-7958835
Accession: ZDB-GENE-030131-6849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000022549	PPR	PF01535.20	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000023147	-	2361	-	ENSAPEP00000022549	677 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000016069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000016069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000016069	ptcd3	88	74.020	ENSACIG00000022263	ptcd3	100	74.020	Amphilophus_citrinellus
ENSAPEG00000016069	ptcd3	100	99.410	ENSAOCG00000017186	ptcd3	100	99.410	Amphiprion_ocellaris
ENSAPEG00000016069	ptcd3	86	47.386	ENSAPLG00000005086	PTCD3	97	47.386	Anas_platyrhynchos
ENSAPEG00000016069	ptcd3	98	78.979	ENSACLG00000020653	ptcd3	100	78.979	Astatotilapia_calliptera
ENSAPEG00000016069	ptcd3	97	57.035	ENSAMXG00000011570	ptcd3	99	57.035	Astyanax_mexicanus
ENSAPEG00000016069	ptcd3	96	71.865	ENSCVAG00000020820	ptcd3	99	73.422	Cyprinodon_variegatus
ENSAPEG00000016069	ptcd3	83	68.430	ENSGAFG00000015291	ptcd3	94	68.430	Gambusia_affinis
ENSAPEG00000016069	ptcd3	98	79.279	ENSHBUG00000020056	ptcd3	100	79.279	Haplochromis_burtoni
ENSAPEG00000016069	ptcd3	97	71.536	ENSLBEG00000015349	ptcd3	99	71.536	Labrus_bergylta
ENSAPEG00000016069	ptcd3	98	79.279	ENSMZEG00005004980	ptcd3	100	79.279	Maylandia_zebra
ENSAPEG00000016069	ptcd3	90	44.481	ENSMGAG00000013124	PTCD3	98	44.822	Meleagris_gallopavo
ENSAPEG00000016069	ptcd3	98	74.589	ENSMALG00000013282	ptcd3	100	74.589	Monopterus_albus
ENSAPEG00000016069	ptcd3	88	73.826	ENSNBRG00000000447	ptcd3	100	73.826	Neolamprologus_brichardi
ENSAPEG00000016069	ptcd3	98	79.279	ENSONIG00000015886	ptcd3	100	79.279	Oreochromis_niloticus
ENSAPEG00000016069	ptcd3	97	71.775	ENSORLG00000008776	ptcd3	100	72.086	Oryzias_latipes
ENSAPEG00000016069	ptcd3	97	71.168	ENSORLG00020020676	ptcd3	98	71.558	Oryzias_latipes_hni
ENSAPEG00000016069	ptcd3	85	59.191	ENSORLG00015015978	ptcd3	99	59.596	Oryzias_latipes_hsok
ENSAPEG00000016069	ptcd3	96	71.231	ENSPFOG00000004442	ptcd3	100	71.231	Poecilia_formosa
ENSAPEG00000016069	ptcd3	88	70.080	ENSPLAG00000021401	ptcd3	100	70.400	Poecilia_latipinna
ENSAPEG00000016069	ptcd3	86	68.601	ENSPMEG00000007153	ptcd3	100	68.942	Poecilia_mexicana
ENSAPEG00000016069	ptcd3	98	53.079	ENSSFOG00015019643	ptcd3	100	53.079	Scleropages_formosus
ENSAPEG00000016069	ptcd3	79	51.859	ENSTGUG00000010760	PTCD3	100	51.859	Taeniopygia_guttata
ENSAPEG00000016069	ptcd3	98	62.481	ENSTRUG00000003939	ptcd3	100	62.481	Takifugu_rubripes