EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000016361 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 6353 bases
Position: chr17:29878467-29884819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000022964	GTP_EFTU	PF00009.27	3.8e-53	1	1
ENSAPEP00000022984	GTP_EFTU	PF00009.27	3.8e-53	1	1
ENSAPEP00000022964	GTP_EFTU_D2	PF03144.25	4.7e-14	1	1
ENSAPEP00000022984	GTP_EFTU_D2	PF03144.25	4.7e-14	1	1
ENSAPEP00000022964	GTP_EFTU_D3	PF03143.17	1.5e-41	1	1
ENSAPEP00000022984	GTP_EFTU_D3	PF03143.17	1.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000023594	-	2143	-	ENSAPEP00000022984	461 (aa)	-	-
ENSAPET00000023574	-	1761	-	ENSAPEP00000022964	461 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000016361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000016361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000016361	-	100	93.939	ENSAPEG00000016257	-	100	93.939
ENSAPEG00000016361	-	94	40.411	ENSAPEG00000008320	hbs1l	61	40.411
ENSAPEG00000016361	-	100	87.662	ENSAPEG00000001072	eef1a1b	100	87.662
ENSAPEG00000016361	-	96	39.729	ENSAPEG00000010261	gspt1l	75	39.729
ENSAPEG00000016361	-	100	87.662	ENSAPEG00000012561	-	100	87.662
ENSAPEG00000016361	-	96	35.586	ENSAPEG00000003359	-	83	35.666
ENSAPEG00000016361	-	100	97.614	ENSAPEG00000016322	-	100	97.614
ENSAPEG00000016361	-	99	70.524	ENSAPEG00000012670	si:dkey-37o8.1	99	70.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000016361	-	98	90.909	ENSAPOG00000004714	-	100	90.456	Acanthochromis_polyacanthus
ENSAPEG00000016361	-	90	91.768	ENSACIG00000001219	-	99	91.768	Amphilophus_citrinellus
ENSAPEG00000016361	-	87	94.045	ENSAOCG00000022002	-	100	93.462	Amphiprion_ocellaris
ENSAPEG00000016361	-	100	98.915	ENSAOCG00000022039	-	100	98.915	Amphiprion_ocellaris
ENSAPEG00000016361	-	98	92.239	ENSATEG00000003244	-	97	91.757	Anabas_testudineus
ENSAPEG00000016361	-	100	90.672	ENSACLG00000022560	-	99	90.672	Astatotilapia_calliptera
ENSAPEG00000016361	-	100	82.251	WBGene00001168	eef-1A.1	99	82.251	Caenorhabditis_elegans
ENSAPEG00000016361	-	100	82.251	WBGene00001169	eef-1A.2	99	82.251	Caenorhabditis_elegans
ENSAPEG00000016361	-	98	79.560	ENSCING00000005126	-	100	79.570	Ciona_intestinalis
ENSAPEG00000016361	-	99	82.751	ENSCING00000021478	-	99	82.751	Ciona_intestinalis
ENSAPEG00000016361	-	98	79.736	ENSCING00000018894	-	99	79.741	Ciona_intestinalis
ENSAPEG00000016361	-	100	78.541	ENSCING00000007703	-	99	78.541	Ciona_intestinalis
ENSAPEG00000016361	-	99	83.589	ENSCSAVG00000006357	-	98	92.000	Ciona_savignyi
ENSAPEG00000016361	-	99	76.906	ENSCSAVG00000001085	-	91	76.906	Ciona_savignyi
ENSAPEG00000016361	-	98	81.538	ENSCSAVG00000009663	-	100	81.505	Ciona_savignyi
ENSAPEG00000016361	-	98	79.956	ENSCSAVG00000003196	-	100	79.957	Ciona_savignyi
ENSAPEG00000016361	-	98	91.796	ENSCSEG00000008011	-	100	91.323	Cynoglossus_semilaevis
ENSAPEG00000016361	-	89	84.709	ENSCSEG00000007992	-	99	84.709	Cynoglossus_semilaevis
ENSAPEG00000016361	-	90	85.024	ENSCSEG00000007972	-	100	85.024	Cynoglossus_semilaevis
ENSAPEG00000016361	-	98	91.796	ENSCVAG00000019356	-	100	91.323	Cyprinodon_variegatus
ENSAPEG00000016361	-	100	84.416	FBgn0284245	eEF1alpha1	99	84.416	Drosophila_melanogaster
ENSAPEG00000016361	-	98	85.177	FBgn0000557	eEF1alpha2	100	84.848	Drosophila_melanogaster
ENSAPEG00000016361	-	99	81.957	ENSEBUG00000015814	-	100	81.957	Eptatretus_burgeri
ENSAPEG00000016361	-	100	91.126	ENSFHEG00000015054	-	100	91.323	Fundulus_heteroclitus
ENSAPEG00000016361	-	98	91.353	ENSGAFG00000014646	-	100	90.889	Gambusia_affinis
ENSAPEG00000016361	-	98	91.796	ENSGACG00000002182	-	100	91.323	Gasterosteus_aculeatus
ENSAPEG00000016361	-	100	88.720	ENSGACG00000002143	-	100	88.720	Gasterosteus_aculeatus
ENSAPEG00000016361	-	55	87.747	ENSHBUG00000017166	-	95	87.747	Haplochromis_burtoni
ENSAPEG00000016361	-	99	85.249	ENSHCOG00000008489	-	100	85.249	Hippocampus_comes
ENSAPEG00000016361	-	98	91.131	ENSHCOG00000008468	-	100	90.672	Hippocampus_comes
ENSAPEG00000016361	-	99	84.130	ENSLBEG00000002955	-	100	84.130	Labrus_bergylta
ENSAPEG00000016361	-	98	91.131	ENSLBEG00000002759	-	100	90.672	Labrus_bergylta
ENSAPEG00000016361	-	98	92.239	ENSMAMG00000007715	-	100	91.757	Mastacembelus_armatus
ENSAPEG00000016361	-	99	85.652	ENSMMOG00000001106	-	99	85.652	Mola_mola
ENSAPEG00000016361	-	99	76.754	ENSMMOG00000018160	-	99	89.130	Mola_mola
ENSAPEG00000016361	-	98	90.466	ENSMMOG00000001165	-	100	94.318	Mola_mola
ENSAPEG00000016361	-	100	79.826	ENSNBRG00000017346	-	99	79.826	Neolamprologus_brichardi
ENSAPEG00000016361	-	76	88.636	ENSONIG00000017760	-	98	88.636	Oreochromis_niloticus
ENSAPEG00000016361	-	98	92.683	ENSORLG00000007614	eef1a	100	92.191	Oryzias_latipes
ENSAPEG00000016361	-	100	92.225	ENSORLG00015002397	-	100	92.225	Oryzias_latipes_hsok
ENSAPEG00000016361	-	98	92.018	ENSOMEG00000018226	-	100	91.540	Oryzias_melastigma
ENSAPEG00000016361	-	98	93.126	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSAPEG00000016361	-	95	49.886	ENSPMGG00000022427	-	96	61.250	Periophthalmus_magnuspinnatus
ENSAPEG00000016361	-	98	91.131	ENSPFOG00000003924	-	100	90.315	Poecilia_formosa
ENSAPEG00000016361	-	98	91.131	ENSPLAG00000004316	-	100	90.672	Poecilia_latipinna
ENSAPEG00000016361	-	98	91.353	ENSPMEG00000001010	-	100	90.889	Poecilia_mexicana
ENSAPEG00000016361	-	100	91.342	ENSPREG00000008243	-	100	91.342	Poecilia_reticulata
ENSAPEG00000016361	-	100	90.672	ENSPNYG00000007263	-	99	90.672	Pundamilia_nyererei
ENSAPEG00000016361	-	97	79.326	YBR118W	TEF2	100	78.913	Saccharomyces_cerevisiae
ENSAPEG00000016361	-	97	79.326	YPR080W	TEF1	100	78.913	Saccharomyces_cerevisiae
ENSAPEG00000016361	-	98	82.452	ENSSMAG00000018469	-	100	82.195	Scophthalmus_maximus
ENSAPEG00000016361	-	53	90.164	ENSSMAG00000016277	-	100	89.370	Scophthalmus_maximus
ENSAPEG00000016361	-	98	92.461	ENSSDUG00000008198	-	100	91.974	Seriola_dumerili
ENSAPEG00000016361	-	98	91.353	ENSSPAG00000001710	-	100	90.889	Stegastes_partitus
ENSAPEG00000016361	-	99	85.000	ENSTRUG00000005066	-	99	85.000	Takifugu_rubripes
ENSAPEG00000016361	-	98	91.574	ENSTRUG00000005727	ef-1a	100	91.106	Takifugu_rubripes
ENSAPEG00000016361	-	98	92.683	ENSTNIG00000002619	-	100	92.191	Tetraodon_nigroviridis
ENSAPEG00000016361	-	97	83.296	ENSTNIG00000002617	-	94	83.296	Tetraodon_nigroviridis
ENSAPEG00000016361	-	98	91.131	ENSXCOG00000001542	-	100	95.349	Xiphophorus_couchianus