EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000016676 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 20463 bases
Position: chr4:11429183-11449645
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000023582	ResIII	PF04851.15	1.5e-06	1	1
ENSAPEP00000023630	ResIII	PF04851.15	1.5e-06	1	1
ENSAPEP00000023686	ResIII	PF04851.15	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000024258	-	6966	-	ENSAPEP00000023630	1772 (aa)	-	-
ENSAPET00000024314	-	5166	-	ENSAPEP00000023686	1721 (aa)	-	-
ENSAPET00000024210	-	7095	-	ENSAPEP00000023582	1815 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000016676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000016676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000016676	chd2	99	55.000	ENSAPEG00000013544	chd1	98	56.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000016676	chd2	100	71.785	ENSG00000173575	CHD2	87	96.939	Homo_sapiens
ENSAPEG00000016676	chd2	100	98.928	ENSAPOG00000008913	chd2	100	98.928	Acanthochromis_polyacanthus
ENSAPEG00000016676	chd2	65	74.979	ENSAMEG00000010805	-	94	76.909	Ailuropoda_melanoleuca
ENSAPEG00000016676	chd2	100	96.419	ENSAOCG00000016332	chd2	100	96.419	Amphiprion_ocellaris
ENSAPEG00000016676	chd2	100	93.637	ENSATEG00000005246	chd2	100	93.750	Anabas_testudineus
ENSAPEG00000016676	chd2	100	71.405	ENSAPLG00000011141	-	96	71.845	Anas_platyrhynchos
ENSAPEG00000016676	chd2	98	69.105	ENSACAG00000000088	-	96	69.390	Anolis_carolinensis
ENSAPEG00000016676	chd2	100	71.598	ENSANAG00000024017	-	96	72.590	Aotus_nancymaae
ENSAPEG00000016676	chd2	99	90.515	ENSACLG00000021370	chd2	98	95.349	Astatotilapia_calliptera
ENSAPEG00000016676	chd2	100	71.444	ENSCJAG00000020444	-	96	72.365	Callithrix_jacchus
ENSAPEG00000016676	chd2	100	71.452	ENSCAFG00000010998	CHD2	95	75.810	Canis_familiaris
ENSAPEG00000016676	chd2	100	69.895	ENSCHIG00000022261	-	98	70.591	Capra_hircus
ENSAPEG00000016676	chd2	100	72.367	ENSTSYG00000003272	-	95	74.320	Carlito_syrichta
ENSAPEG00000016676	chd2	93	74.212	ENSCPOG00000005800	-	96	75.420	Cavia_porcellus
ENSAPEG00000016676	chd2	100	71.651	ENSCCAG00000035304	-	96	72.646	Cebus_capucinus
ENSAPEG00000016676	chd2	100	71.677	ENSCATG00000031069	-	96	72.493	Cercocebus_atys
ENSAPEG00000016676	chd2	100	71.297	ENSCLAG00000016269	-	96	72.213	Chinchilla_lanigera
ENSAPEG00000016676	chd2	100	71.731	ENSCSAG00000017007	-	96	72.549	Chlorocebus_sabaeus
ENSAPEG00000016676	chd2	75	81.001	ENSCHOG00000000608	-	75	81.084	Choloepus_hoffmanni
ENSAPEG00000016676	chd2	82	77.239	ENSCPBG00000018049	-	95	81.360	Chrysemys_picta_bellii
ENSAPEG00000016676	chd2	78	53.034	ENSCSAVG00000007580	-	95	58.002	Ciona_savignyi
ENSAPEG00000016676	chd2	100	71.677	ENSCANG00000038126	-	98	70.627	Colobus_angolensis_palliatus
ENSAPEG00000016676	chd2	100	71.974	ENSCGRG00001006649	Chd2	96	72.309	Cricetulus_griseus_chok1gshd
ENSAPEG00000016676	chd2	100	71.974	ENSCGRG00000018154	Chd2	96	72.309	Cricetulus_griseus_crigri
ENSAPEG00000016676	chd2	100	77.884	ENSCSEG00000003646	chd2	95	95.349	Cynoglossus_semilaevis
ENSAPEG00000016676	chd2	100	81.968	ENSCVAG00000002427	chd2	100	81.528	Cyprinodon_variegatus
ENSAPEG00000016676	chd2	100	80.828	ENSDARG00000060687	chd2	100	82.775	Danio_rerio
ENSAPEG00000016676	chd2	99	71.948	ENSDNOG00000009796	-	96	72.620	Dasypus_novemcinctus
ENSAPEG00000016676	chd2	53	75.532	ENSEBUG00000014994	chd2	85	76.087	Eptatretus_burgeri
ENSAPEG00000016676	chd2	100	73.070	ENSEASG00005015526	-	97	77.798	Equus_asinus_asinus
ENSAPEG00000016676	chd2	100	82.715	ENSELUG00000017981	chd2	97	96.667	Esox_lucius
ENSAPEG00000016676	chd2	100	71.613	ENSFALG00000010369	-	96	72.564	Ficedula_albicollis
ENSAPEG00000016676	chd2	100	71.274	ENSFDAG00000020651	-	96	72.285	Fukomys_damarensis
ENSAPEG00000016676	chd2	100	85.546	ENSFHEG00000002119	chd2	100	89.000	Fundulus_heteroclitus
ENSAPEG00000016676	chd2	95	84.144	ENSGMOG00000002890	chd2	99	84.259	Gadus_morhua
ENSAPEG00000016676	chd2	100	71.697	ENSGALG00000006949	CHD2	96	72.315	Gallus_gallus
ENSAPEG00000016676	chd2	99	88.930	ENSGAFG00000001905	chd2	97	89.412	Gambusia_affinis
ENSAPEG00000016676	chd2	96	89.157	ENSGACG00000013246	chd2	99	89.157	Gasterosteus_aculeatus
ENSAPEG00000016676	chd2	82	78.938	ENSGAGG00000013176	-	96	87.640	Gopherus_agassizii
ENSAPEG00000016676	chd2	100	70.738	ENSGGOG00000015677	CHD2	96	71.525	Gorilla_gorilla
ENSAPEG00000016676	chd2	100	94.328	ENSHBUG00000017947	chd2	100	94.383	Haplochromis_burtoni
ENSAPEG00000016676	chd2	100	71.165	ENSHGLG00000004435	CHD2	96	72.213	Heterocephalus_glaber_female
ENSAPEG00000016676	chd2	100	70.786	ENSHGLG00100016376	-	96	71.821	Heterocephalus_glaber_male
ENSAPEG00000016676	chd2	99	84.489	ENSHCOG00000008855	chd2	97	81.871	Hippocampus_comes
ENSAPEG00000016676	chd2	99	77.897	ENSIPUG00000000488	chd2	98	78.972	Ictalurus_punctatus
ENSAPEG00000016676	chd2	100	72.328	ENSSTOG00000001270	-	96	72.829	Ictidomys_tridecemlineatus
ENSAPEG00000016676	chd2	100	71.607	ENSJJAG00000000213	Chd2	96	72.534	Jaculus_jaculus
ENSAPEG00000016676	chd2	86	89.322	ENSKMAG00000015849	chd2	99	89.530	Kryptolebias_marmoratus
ENSAPEG00000016676	chd2	77	73.632	ENSLAFG00000016885	-	98	81.084	Loxodonta_africana
ENSAPEG00000016676	chd2	100	71.731	ENSMFAG00000033343	-	96	72.549	Macaca_fascicularis
ENSAPEG00000016676	chd2	100	71.731	ENSMMUG00000011782	-	96	72.549	Macaca_mulatta
ENSAPEG00000016676	chd2	100	71.491	ENSMNEG00000036875	-	96	72.300	Macaca_nemestrina
ENSAPEG00000016676	chd2	100	71.731	ENSMLEG00000035026	-	96	72.549	Mandrillus_leucophaeus
ENSAPEG00000016676	chd2	100	93.251	ENSMAMG00000009082	chd2	100	93.195	Mastacembelus_armatus
ENSAPEG00000016676	chd2	99	90.515	ENSMZEG00005021333	chd2	98	95.349	Maylandia_zebra
ENSAPEG00000016676	chd2	99	71.661	ENSMGAG00000008966	-	99	71.303	Meleagris_gallopavo
ENSAPEG00000016676	chd2	100	70.722	ENSMICG00000000332	-	98	70.928	Microcebus_murinus
ENSAPEG00000016676	chd2	100	72.043	ENSMOCG00000015124	Chd2	96	72.493	Microtus_ochrogaster
ENSAPEG00000016676	chd2	100	72.512	ENSMODG00000013158	-	96	73.318	Monodelphis_domestica
ENSAPEG00000016676	chd2	99	90.367	ENSMALG00000007755	chd2	96	94.186	Monopterus_albus
ENSAPEG00000016676	chd2	100	72.228	MGP_CAROLIEiJ_G0029860	Chd2	96	72.686	Mus_caroli
ENSAPEG00000016676	chd2	100	71.867	ENSMUSG00000078671	Chd2	96	72.702	Mus_musculus
ENSAPEG00000016676	chd2	100	72.174	MGP_PahariEiJ_G0013082	Chd2	96	72.518	Mus_pahari
ENSAPEG00000016676	chd2	100	72.243	MGP_SPRETEiJ_G0030962	Chd2	96	72.646	Mus_spretus
ENSAPEG00000016676	chd2	100	72.204	ENSMPUG00000017577	-	96	72.758	Mustela_putorius_furo
ENSAPEG00000016676	chd2	100	71.336	ENSMLUG00000009292	-	97	71.311	Myotis_lucifugus
ENSAPEG00000016676	chd2	100	72.243	ENSNGAG00000010792	Chd2	96	72.646	Nannospalax_galili
ENSAPEG00000016676	chd2	99	91.977	ENSNBRG00000020591	chd2	99	92.075	Neolamprologus_brichardi
ENSAPEG00000016676	chd2	100	69.778	ENSNLEG00000012349	-	95	72.096	Nomascus_leucogenys
ENSAPEG00000016676	chd2	70	77.105	ENSMEUG00000001522	-	68	80.392	Notamacropus_eugenii
ENSAPEG00000016676	chd2	100	70.674	ENSODEG00000016028	-	96	71.485	Octodon_degus
ENSAPEG00000016676	chd2	100	94.218	ENSONIG00000015136	chd2	100	94.273	Oreochromis_niloticus
ENSAPEG00000016676	chd2	90	69.018	ENSOANG00000004385	-	99	69.116	Ornithorhynchus_anatinus
ENSAPEG00000016676	chd2	100	66.485	ENSOCUG00000001628	-	93	77.175	Oryctolagus_cuniculus
ENSAPEG00000016676	chd2	100	91.165	ENSORLG00000008403	chd2	100	91.165	Oryzias_latipes
ENSAPEG00000016676	chd2	100	90.704	ENSORLG00020004138	chd2	100	90.979	Oryzias_latipes_hni
ENSAPEG00000016676	chd2	100	83.617	ENSOMEG00000005831	chd2	100	81.683	Oryzias_melastigma
ENSAPEG00000016676	chd2	100	70.103	ENSOGAG00000010399	-	96	70.700	Otolemur_garnettii
ENSAPEG00000016676	chd2	100	72.757	ENSOARG00000010343	-	96	73.479	Ovis_aries
ENSAPEG00000016676	chd2	100	70.822	ENSPPAG00000030381	-	96	71.308	Pan_paniscus
ENSAPEG00000016676	chd2	100	71.731	ENSPTRG00000007478	CHD2	96	72.549	Pan_troglodytes
ENSAPEG00000016676	chd2	100	69.072	ENSPANG00000033355	-	96	69.804	Papio_anubis
ENSAPEG00000016676	chd2	100	82.488	ENSPKIG00000000495	chd2	100	82.485	Paramormyrops_kingsleyae
ENSAPEG00000016676	chd2	87	83.136	ENSPMGG00000009941	chd2	99	83.574	Periophthalmus_magnuspinnatus
ENSAPEG00000016676	chd2	100	72.028	ENSPEMG00000019507	Chd2	96	72.365	Peromyscus_maniculatus_bairdii
ENSAPEG00000016676	chd2	94	73.772	ENSPCIG00000009417	-	99	76.497	Phascolarctos_cinereus
ENSAPEG00000016676	chd2	100	91.304	ENSPFOG00000007050	chd2	100	91.524	Poecilia_formosa
ENSAPEG00000016676	chd2	100	91.635	ENSPLAG00000005067	chd2	100	91.690	Poecilia_latipinna
ENSAPEG00000016676	chd2	100	91.714	ENSPMEG00000019628	chd2	100	91.883	Poecilia_mexicana
ENSAPEG00000016676	chd2	100	70.537	ENSPPYG00000006799	-	96	71.317	Pongo_abelii
ENSAPEG00000016676	chd2	100	72.002	ENSPCOG00000028084	-	96	72.549	Propithecus_coquereli
ENSAPEG00000016676	chd2	99	90.741	ENSPNYG00000010273	chd2	98	95.349	Pundamilia_nyererei
ENSAPEG00000016676	chd2	99	79.066	ENSPNAG00000016719	chd2	70	83.279	Pygocentrus_nattereri
ENSAPEG00000016676	chd2	100	72.082	ENSRNOG00000012716	Chd2	97	71.611	Rattus_norvegicus
ENSAPEG00000016676	chd2	100	70.195	ENSRBIG00000036875	-	96	70.908	Rhinopithecus_bieti
ENSAPEG00000016676	chd2	100	71.731	ENSRROG00000041087	-	96	72.549	Rhinopithecus_roxellana
ENSAPEG00000016676	chd2	100	71.661	ENSSBOG00000023754	-	96	72.590	Saimiri_boliviensis_boliviensis
ENSAPEG00000016676	chd2	100	72.727	ENSSHAG00000012513	-	96	73.543	Sarcophilus_harrisii
ENSAPEG00000016676	chd2	100	83.252	ENSSFOG00015023759	chd2	100	83.033	Scleropages_formosus
ENSAPEG00000016676	chd2	100	92.633	ENSSMAG00000001726	chd2	100	92.688	Scophthalmus_maximus
ENSAPEG00000016676	chd2	99	92.672	ENSSLDG00000001146	chd2	98	95.349	Seriola_lalandi_dorsalis
ENSAPEG00000016676	chd2	76	80.000	ENSSARG00000014112	-	75	80.000	Sorex_araneus
ENSAPEG00000016676	chd2	100	69.299	ENSSPUG00000011266	-	94	80.392	Sphenodon_punctatus
ENSAPEG00000016676	chd2	99	94.479	ENSSPAG00000016452	chd2	100	94.479	Stegastes_partitus
ENSAPEG00000016676	chd2	100	72.165	ENSSSCG00000002266	-	100	74.874	Sus_scrofa
ENSAPEG00000016676	chd2	100	71.661	ENSTGUG00000008540	-	96	72.297	Taeniopygia_guttata
ENSAPEG00000016676	chd2	88	84.841	ENSTRUG00000008842	chd2	91	84.580	Takifugu_rubripes
ENSAPEG00000016676	chd2	87	89.583	ENSTNIG00000010760	chd2	96	89.478	Tetraodon_nigroviridis
ENSAPEG00000016676	chd2	73	71.366	ENSTBEG00000017730	-	78	71.366	Tupaia_belangeri
ENSAPEG00000016676	chd2	91	74.091	ENSTTRG00000000430	-	90	74.326	Tursiops_truncatus
ENSAPEG00000016676	chd2	100	70.697	ENSUMAG00000000083	-	96	71.091	Ursus_maritimus
ENSAPEG00000016676	chd2	84	86.257	ENSVPAG00000009645	-	82	86.257	Vicugna_pacos
ENSAPEG00000016676	chd2	94	67.261	ENSXETG00000024129	chd2	73	75.415	Xenopus_tropicalis
ENSAPEG00000016676	chd2	99	88.984	ENSXCOG00000020255	chd2	99	91.765	Xiphophorus_couchianus
ENSAPEG00000016676	chd2	100	91.822	ENSXMAG00000002707	chd2	100	91.991	Xiphophorus_maculatus