EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000016776 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 26853 bases
Position: chr14:18078321-18105173
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000023646	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSAPEP00000023616	zf-C2H2_jaz	PF12171.8	5.4e-06	1	1
ENSAPEP00000023627	zf-C2H2_jaz	PF12171.8	5.4e-06	1	1
ENSAPEP00000023636	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSAPEP00000023566	zf-C2H2_jaz	PF12171.8	5.7e-06	1	1
ENSAPEP00000023566	G-patch	PF01585.23	8.8e-13	1	1
ENSAPEP00000023636	G-patch	PF01585.23	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000024264	-	4374	-	ENSAPEP00000023636	1457 (aa)	-	-
ENSAPET00000024194	-	4533	-	ENSAPEP00000023566	1491 (aa)	-	-
ENSAPET00000024255	-	4547	-	ENSAPEP00000023627	1428 (aa)	-	-
ENSAPET00000024244	-	4566	-	ENSAPEP00000023616	1428 (aa)	-	-
ENSAPET00000024274	-	4395	-	ENSAPEP00000023646	1412 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000016776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000016776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000016776	gpatch8	100	97.518	ENSAPOG00000023938	gpatch8	100	97.518	Acanthochromis_polyacanthus
ENSAPEG00000016776	gpatch8	100	90.040	ENSACIG00000012241	gpatch8	100	90.174	Amphilophus_citrinellus
ENSAPEG00000016776	gpatch8	100	99.598	ENSAOCG00000018102	gpatch8	100	99.598	Amphiprion_ocellaris
ENSAPEG00000016776	gpatch8	100	87.802	ENSATEG00000003247	gpatch8	100	87.534	Anabas_testudineus
ENSAPEG00000016776	gpatch8	100	88.889	ENSACLG00000004165	gpatch8	100	88.889	Astatotilapia_calliptera
ENSAPEG00000016776	gpatch8	99	63.128	ENSAMXG00000041683	gpatch8	57	64.088	Astyanax_mexicanus
ENSAPEG00000016776	gpatch8	100	83.266	ENSCSEG00000021277	gpatch8	100	83.266	Cynoglossus_semilaevis
ENSAPEG00000016776	gpatch8	100	84.256	ENSCVAG00000013477	gpatch8	100	84.421	Cyprinodon_variegatus
ENSAPEG00000016776	gpatch8	100	64.444	ENSDARG00000059768	gpatch8	56	60.532	Danio_rerio
ENSAPEG00000016776	gpatch8	61	66.563	ENSELUG00000019920	gpatch8	57	66.553	Esox_lucius
ENSAPEG00000016776	gpatch8	56	76.225	ENSFHEG00000005791	gpatch8	100	82.412	Fundulus_heteroclitus
ENSAPEG00000016776	gpatch8	76	54.042	ENSGALG00000041556	GPATCH8	54	47.944	Gallus_gallus
ENSAPEG00000016776	gpatch8	100	84.003	ENSGAFG00000018138	gpatch8	100	83.534	Gambusia_affinis
ENSAPEG00000016776	gpatch8	100	88.911	ENSHBUG00000002669	gpatch8	100	89.112	Haplochromis_burtoni
ENSAPEG00000016776	gpatch8	73	57.986	ENSHGLG00100010738	GPATCH8	92	57.812	Heterocephalus_glaber_male
ENSAPEG00000016776	gpatch8	100	75.050	ENSHCOG00000017518	gpatch8	100	74.584	Hippocampus_comes
ENSAPEG00000016776	gpatch8	59	61.339	ENSIPUG00000015431	gpatch8	55	61.060	Ictalurus_punctatus
ENSAPEG00000016776	gpatch8	100	85.705	ENSKMAG00000018364	gpatch8	100	85.504	Kryptolebias_marmoratus
ENSAPEG00000016776	gpatch8	100	85.695	ENSLBEG00000023352	gpatch8	100	85.762	Labrus_bergylta
ENSAPEG00000016776	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	70	75.177	Lepisosteus_oculatus
ENSAPEG00000016776	gpatch8	100	89.880	ENSMAMG00000001618	gpatch8	100	89.880	Mastacembelus_armatus
ENSAPEG00000016776	gpatch8	100	88.889	ENSMZEG00005022584	gpatch8	100	88.889	Maylandia_zebra
ENSAPEG00000016776	gpatch8	61	84.153	ENSMMOG00000020472	gpatch8	100	84.687	Mola_mola
ENSAPEG00000016776	gpatch8	100	86.497	ENSMALG00000004204	gpatch8	100	85.094	Monopterus_albus
ENSAPEG00000016776	gpatch8	54	62.428	ENSMLUG00000013840	GPATCH8	57	63.314	Myotis_lucifugus
ENSAPEG00000016776	gpatch8	100	89.224	ENSNBRG00000016402	gpatch8	100	89.424	Neolamprologus_brichardi
ENSAPEG00000016776	gpatch8	100	85.953	ENSONIG00000001292	gpatch8	100	88.582	Oreochromis_niloticus
ENSAPEG00000016776	gpatch8	56	77.765	ENSORLG00000028497	gpatch8	100	81.848	Oryzias_latipes
ENSAPEG00000016776	gpatch8	56	55.516	ENSPKIG00000004860	GPATCH8	50	56.962	Paramormyrops_kingsleyae
ENSAPEG00000016776	gpatch8	61	53.162	ENSPKIG00000018753	gpatch8	56	53.154	Paramormyrops_kingsleyae
ENSAPEG00000016776	gpatch8	100	78.699	ENSPMGG00000000730	gpatch8	99	78.339	Periophthalmus_magnuspinnatus
ENSAPEG00000016776	gpatch8	100	83.957	ENSPFOG00000014833	gpatch8	100	84.158	Poecilia_formosa
ENSAPEG00000016776	gpatch8	100	83.824	ENSPLAG00000001035	gpatch8	100	84.024	Poecilia_latipinna
ENSAPEG00000016776	gpatch8	100	84.291	ENSPMEG00000024032	gpatch8	100	84.158	Poecilia_mexicana
ENSAPEG00000016776	gpatch8	100	89.023	ENSPNYG00000009426	gpatch8	100	89.023	Pundamilia_nyererei
ENSAPEG00000016776	gpatch8	59	63.685	ENSPNAG00000016200	gpatch8	58	65.153	Pygocentrus_nattereri
ENSAPEG00000016776	gpatch8	56	58.891	ENSSFOG00015004299	GPATCH8	51	60.897	Scleropages_formosus
ENSAPEG00000016776	gpatch8	55	57.143	ENSSFOG00015021377	-	55	55.581	Scleropages_formosus
ENSAPEG00000016776	gpatch8	100	90.450	ENSSDUG00000018065	gpatch8	100	90.450	Seriola_dumerili
ENSAPEG00000016776	gpatch8	100	91.261	ENSSLDG00000009225	gpatch8	100	91.328	Seriola_lalandi_dorsalis
ENSAPEG00000016776	gpatch8	100	95.708	ENSSPAG00000011368	gpatch8	100	95.708	Stegastes_partitus
ENSAPEG00000016776	gpatch8	100	79.533	ENSTRUG00000020474	gpatch8	100	78.867	Takifugu_rubripes
ENSAPEG00000016776	gpatch8	62	60.490	ENSTBEG00000009486	GPATCH8	55	60.490	Tupaia_belangeri
ENSAPEG00000016776	gpatch8	100	83.400	ENSXCOG00000016680	gpatch8	100	82.867	Xiphophorus_couchianus
ENSAPEG00000016776	gpatch8	100	83.456	ENSXMAG00000009217	gpatch8	100	83.055	Xiphophorus_maculatus