EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000016988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 12764 bases
Position: chr15:28463397-28476160
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000023898	RRM_5	PF13893.6	6.5e-11	1	2
ENSAPEP00000023898	RRM_5	PF13893.6	6.5e-11	2	2
ENSAPEP00000023919	RRM_5	PF13893.6	9e-11	1	2
ENSAPEP00000023919	RRM_5	PF13893.6	9e-11	2	2
ENSAPEP00000023908	RRM_5	PF13893.6	1.1e-10	1	2
ENSAPEP00000023908	RRM_5	PF13893.6	1.1e-10	2	2
ENSAPEP00000023919	RRM_1	PF00076.22	7.6e-34	1	2
ENSAPEP00000023919	RRM_1	PF00076.22	7.6e-34	2	2
ENSAPEP00000023898	RRM_1	PF00076.22	8.6e-34	1	2
ENSAPEP00000023898	RRM_1	PF00076.22	8.6e-34	2	2
ENSAPEP00000023908	RRM_1	PF00076.22	8.8e-34	1	2
ENSAPEP00000023908	RRM_1	PF00076.22	8.8e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000024529	-	1629	-	ENSAPEP00000023898	542 (aa)	-	-
ENSAPET00000024539	-	6061	-	ENSAPEP00000023908	546 (aa)	-	-
ENSAPET00000024550	-	2668	-	ENSAPEP00000023919	519 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000016988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000016988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000016988	-	74	63.441	ENSAPEG00000003161	rbm14b	83	56.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000016988	-	100	97.996	ENSAPOG00000003380	-	100	97.996	Acanthochromis_polyacanthus
ENSAPEG00000016988	-	74	63.177	ENSAPOG00000021712	rbm14b	72	63.214	Acanthochromis_polyacanthus
ENSAPEG00000016988	-	74	63.082	ENSACIG00000000381	rbm14b	68	63.214	Amphilophus_citrinellus
ENSAPEG00000016988	-	100	90.346	ENSACIG00000021173	-	99	90.346	Amphilophus_citrinellus
ENSAPEG00000016988	-	100	99.807	ENSAOCG00000001659	-	100	99.807	Amphiprion_ocellaris
ENSAPEG00000016988	-	74	63.441	ENSAOCG00000008941	rbm14b	83	56.608	Amphiprion_ocellaris
ENSAPEG00000016988	-	74	62.366	ENSATEG00000003034	rbm14b	79	58.955	Anabas_testudineus
ENSAPEG00000016988	-	99	91.794	ENSATEG00000009700	-	97	91.794	Anabas_testudineus
ENSAPEG00000016988	-	99	91.241	ENSACLG00000009112	-	96	91.423	Astatotilapia_calliptera
ENSAPEG00000016988	-	74	49.380	ENSACLG00000014355	rbm14b	81	49.691	Astatotilapia_calliptera
ENSAPEG00000016988	-	74	62.406	ENSAMXG00000007233	rbm14a	83	62.935	Astyanax_mexicanus
ENSAPEG00000016988	-	71	60.417	ENSAMXG00000031225	rbm14b	86	48.614	Astyanax_mexicanus
ENSAPEG00000016988	-	69	54.808	ENSCSEG00000000357	rbm14b	81	53.741	Cynoglossus_semilaevis
ENSAPEG00000016988	-	99	86.157	ENSCSEG00000019690	-	99	86.339	Cynoglossus_semilaevis
ENSAPEG00000016988	-	99	86.388	ENSCVAG00000014858	-	99	86.570	Cyprinodon_variegatus
ENSAPEG00000016988	-	74	49.792	ENSCVAG00000013776	rbm14b	84	49.896	Cyprinodon_variegatus
ENSAPEG00000016988	-	69	61.538	ENSDARG00000103834	rbm14b	82	48.312	Danio_rerio
ENSAPEG00000016988	-	74	60.459	ENSDARG00000012723	rbm14a	81	60.406	Danio_rerio
ENSAPEG00000016988	-	88	58.434	ENSELUG00000023633	rbm14a	82	59.016	Esox_lucius
ENSAPEG00000016988	-	71	62.191	ENSELUG00000004690	rbm14b	73	62.324	Esox_lucius
ENSAPEG00000016988	-	74	50.000	ENSFHEG00000021265	rbm14b	84	50.936	Fundulus_heteroclitus
ENSAPEG00000016988	-	99	84.791	ENSFHEG00000020913	-	99	84.981	Fundulus_heteroclitus
ENSAPEG00000016988	-	73	80.628	ENSGMOG00000010840	-	79	81.217	Gadus_morhua
ENSAPEG00000016988	-	100	85.165	ENSGAFG00000004455	-	99	87.189	Gambusia_affinis
ENSAPEG00000016988	-	74	61.458	ENSGAFG00000001924	rbm14b	84	47.619	Gambusia_affinis
ENSAPEG00000016988	-	88	90.393	ENSGACG00000020440	-	94	90.949	Gasterosteus_aculeatus
ENSAPEG00000016988	-	99	91.241	ENSHBUG00000003665	-	96	91.423	Haplochromis_burtoni
ENSAPEG00000016988	-	74	49.380	ENSHBUG00000016754	rbm14b	81	49.691	Haplochromis_burtoni
ENSAPEG00000016988	-	79	54.481	ENSHCOG00000012571	rbm14b	99	67.500	Hippocampus_comes
ENSAPEG00000016988	-	99	77.570	ENSHCOG00000004071	-	99	78.908	Hippocampus_comes
ENSAPEG00000016988	-	74	55.663	ENSIPUG00000021256	rbm14a	84	56.115	Ictalurus_punctatus
ENSAPEG00000016988	-	69	59.932	ENSIPUG00000009089	rbm14b	87	48.517	Ictalurus_punctatus
ENSAPEG00000016988	-	100	86.564	ENSKMAG00000008514	-	100	86.948	Kryptolebias_marmoratus
ENSAPEG00000016988	-	74	62.724	ENSKMAG00000020444	rbm14b	69	62.857	Kryptolebias_marmoratus
ENSAPEG00000016988	-	99	88.725	ENSLBEG00000001217	-	99	88.725	Labrus_bergylta
ENSAPEG00000016988	-	74	63.082	ENSLBEG00000027934	rbm14b	63	63.214	Labrus_bergylta
ENSAPEG00000016988	-	99	89.474	ENSMAMG00000021313	-	99	89.474	Mastacembelus_armatus
ENSAPEG00000016988	-	73	63.004	ENSMAMG00000014394	rbm14b	65	63.139	Mastacembelus_armatus
ENSAPEG00000016988	-	99	91.241	ENSMZEG00005001201	-	99	91.423	Maylandia_zebra
ENSAPEG00000016988	-	74	49.380	ENSMZEG00005020834	rbm14b	82	49.691	Maylandia_zebra
ENSAPEG00000016988	-	74	58.065	ENSMMOG00000012912	rbm14b	72	58.214	Mola_mola
ENSAPEG00000016988	-	99	87.800	ENSMMOG00000014501	-	99	88.170	Mola_mola
ENSAPEG00000016988	-	69	57.937	ENSMALG00000015445	rbm14b	82	58.839	Monopterus_albus
ENSAPEG00000016988	-	74	49.380	ENSNBRG00000003378	rbm14b	82	49.691	Neolamprologus_brichardi
ENSAPEG00000016988	-	99	91.042	ENSNBRG00000004960	-	99	91.042	Neolamprologus_brichardi
ENSAPEG00000016988	-	99	79.348	ENSONIG00000008557	-	94	89.485	Oreochromis_niloticus
ENSAPEG00000016988	-	69	59.416	ENSONIG00000013035	rbm14b	83	58.955	Oreochromis_niloticus
ENSAPEG00000016988	-	74	50.520	ENSORLG00000008051	rbm14b	83	50.207	Oryzias_latipes
ENSAPEG00000016988	-	100	87.477	ENSORLG00000001900	-	99	87.669	Oryzias_latipes
ENSAPEG00000016988	-	100	87.477	ENSORLG00020019144	-	99	87.669	Oryzias_latipes_hni
ENSAPEG00000016988	-	74	49.792	ENSORLG00020005551	rbm14b	81	49.480	Oryzias_latipes_hni
ENSAPEG00000016988	-	99	87.912	ENSORLG00015000082	-	99	87.912	Oryzias_latipes_hsok
ENSAPEG00000016988	-	74	50.312	ENSORLG00015022683	rbm14b	83	50.000	Oryzias_latipes_hsok
ENSAPEG00000016988	-	73	56.234	ENSOMEG00000000910	rbm14b	79	57.035	Oryzias_melastigma
ENSAPEG00000016988	-	80	88.855	ENSOMEG00000006508	-	94	93.878	Oryzias_melastigma
ENSAPEG00000016988	-	73	52.402	ENSPKIG00000009078	rbm14b	86	52.484	Paramormyrops_kingsleyae
ENSAPEG00000016988	-	74	60.943	ENSPMGG00000013064	rbm14b	70	61.074	Periophthalmus_magnuspinnatus
ENSAPEG00000016988	-	80	80.430	ENSPMGG00000018869	-	94	87.333	Periophthalmus_magnuspinnatus
ENSAPEG00000016988	-	99	85.660	ENSPFOG00000004843	-	99	86.424	Poecilia_formosa
ENSAPEG00000016988	-	74	49.585	ENSPFOG00000003614	rbm14b	84	50.311	Poecilia_formosa
ENSAPEG00000016988	-	99	85.660	ENSPLAG00000017359	-	99	86.424	Poecilia_latipinna
ENSAPEG00000016988	-	74	48.340	ENSPLAG00000001395	rbm14b	84	48.861	Poecilia_latipinna
ENSAPEG00000016988	-	74	48.755	ENSPMEG00000012911	rbm14b	84	49.275	Poecilia_mexicana
ENSAPEG00000016988	-	99	86.182	ENSPMEG00000004894	-	99	86.909	Poecilia_mexicana
ENSAPEG00000016988	-	74	47.925	ENSPREG00000003013	rbm14b	84	48.861	Poecilia_reticulata
ENSAPEG00000016988	-	99	86.233	ENSPREG00000007274	-	99	86.807	Poecilia_reticulata
ENSAPEG00000016988	-	99	91.241	ENSPNYG00000015906	-	99	91.423	Pundamilia_nyererei
ENSAPEG00000016988	-	74	49.587	ENSPNYG00000023605	rbm14b	82	50.000	Pundamilia_nyererei
ENSAPEG00000016988	-	71	60.690	ENSPNAG00000001977	rbm14b	84	48.837	Pygocentrus_nattereri
ENSAPEG00000016988	-	74	59.179	ENSPNAG00000012473	rbm14a	85	59.472	Pygocentrus_nattereri
ENSAPEG00000016988	-	70	52.144	ENSSFOG00015023796	rbm14b	85	50.759	Scleropages_formosus
ENSAPEG00000016988	-	100	91.026	ENSSMAG00000002055	-	100	90.563	Scophthalmus_maximus
ENSAPEG00000016988	-	69	62.290	ENSSMAG00000004522	rbm14b	82	62.290	Scophthalmus_maximus
ENSAPEG00000016988	-	99	91.833	ENSSDUG00000020756	-	99	92.740	Seriola_dumerili
ENSAPEG00000016988	-	74	60.943	ENSSDUG00000007975	rbm14b	76	63.082	Seriola_dumerili
ENSAPEG00000016988	-	99	91.336	ENSSLDG00000006311	-	99	92.238	Seriola_lalandi_dorsalis
ENSAPEG00000016988	-	74	60.943	ENSSLDG00000006472	rbm14b	76	63.082	Seriola_lalandi_dorsalis
ENSAPEG00000016988	-	74	63.082	ENSSPAG00000004231	rbm14b	68	63.214	Stegastes_partitus
ENSAPEG00000016988	-	100	96.737	ENSSPAG00000010825	-	99	95.985	Stegastes_partitus
ENSAPEG00000016988	-	74	63.082	ENSTRUG00000005716	rbm14b	70	63.214	Takifugu_rubripes
ENSAPEG00000016988	-	99	81.190	ENSTRUG00000009504	-	93	81.431	Takifugu_rubripes
ENSAPEG00000016988	-	69	54.907	ENSTNIG00000006844	rbm14b	80	55.224	Tetraodon_nigroviridis
ENSAPEG00000016988	-	92	78.355	ENSTNIG00000000058	-	99	78.775	Tetraodon_nigroviridis
ENSAPEG00000016988	-	99	84.663	ENSXCOG00000006825	-	99	84.663	Xiphophorus_couchianus
ENSAPEG00000016988	-	74	48.755	ENSXMAG00000008390	rbm14b	84	49.275	Xiphophorus_maculatus
ENSAPEG00000016988	-	100	85.348	ENSXMAG00000000338	-	99	86.909	Xiphophorus_maculatus