EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000017489 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 17758 bases
Position: chr4:11765022-11782779
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000024683	MMR_HSR1	PF01926.23	9.9e-06	1	1
ENSAPEP00000024667	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000025315	-	6716	-	ENSAPEP00000024667	661 (aa)	-	-
ENSAPET00000025331	-	1911	-	ENSAPEP00000024683	636 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000017489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000017489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000017489	zgc:162879	82	55.263	ENSAPEG00000003461	rasef	76	55.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000017489	zgc:162879	100	94.705	ENSAPOG00000008539	zgc:162879	100	94.705	Acanthochromis_polyacanthus
ENSAPEG00000017489	zgc:162879	99	83.939	ENSACIG00000023717	zgc:162879	99	83.939	Amphilophus_citrinellus
ENSAPEG00000017489	zgc:162879	87	99.278	ENSAOCG00000006210	zgc:162879	88	99.278	Amphiprion_ocellaris
ENSAPEG00000017489	zgc:162879	99	86.495	ENSATEG00000006102	zgc:162879	99	86.495	Anabas_testudineus
ENSAPEG00000017489	zgc:162879	99	82.219	ENSACLG00000021066	zgc:162879	99	80.120	Astatotilapia_calliptera
ENSAPEG00000017489	zgc:162879	99	63.623	ENSAMXG00000007430	zgc:162879	99	63.623	Astyanax_mexicanus
ENSAPEG00000017489	zgc:162879	85	64.769	ENSCSEG00000013699	zgc:162879	91	64.769	Cynoglossus_semilaevis
ENSAPEG00000017489	zgc:162879	99	75.495	ENSCVAG00000014510	zgc:162879	99	75.495	Cyprinodon_variegatus
ENSAPEG00000017489	zgc:162879	99	64.297	ENSDARG00000074163	zgc:162879	99	64.297	Danio_rerio
ENSAPEG00000017489	zgc:162879	91	66.448	ENSELUG00000019483	zgc:162879	97	66.121	Esox_lucius
ENSAPEG00000017489	zgc:162879	76	72.366	ENSFHEG00000022549	zgc:162879	100	72.152	Fundulus_heteroclitus
ENSAPEG00000017489	zgc:162879	99	74.164	ENSGAFG00000001313	zgc:162879	99	74.164	Gambusia_affinis
ENSAPEG00000017489	zgc:162879	99	76.890	ENSGACG00000010798	zgc:162879	98	76.599	Gasterosteus_aculeatus
ENSAPEG00000017489	zgc:162879	99	82.094	ENSHBUG00000016335	zgc:162879	99	82.094	Haplochromis_burtoni
ENSAPEG00000017489	zgc:162879	99	52.640	ENSHCOG00000012026	zgc:162879	99	58.843	Hippocampus_comes
ENSAPEG00000017489	zgc:162879	99	70.713	ENSKMAG00000016246	zgc:162879	99	71.320	Kryptolebias_marmoratus
ENSAPEG00000017489	zgc:162879	99	78.756	ENSLBEG00000006690	zgc:162879	99	78.756	Labrus_bergylta
ENSAPEG00000017489	zgc:162879	99	43.081	ENSLACG00000014082	-	98	43.081	Latimeria_chalumnae
ENSAPEG00000017489	zgc:162879	99	60.954	ENSLOCG00000014347	zgc:162879	98	60.954	Lepisosteus_oculatus
ENSAPEG00000017489	zgc:162879	99	80.851	ENSMAMG00000008875	zgc:162879	99	80.851	Mastacembelus_armatus
ENSAPEG00000017489	zgc:162879	99	82.067	ENSMZEG00005022256	zgc:162879	99	82.067	Maylandia_zebra
ENSAPEG00000017489	zgc:162879	99	74.545	ENSNBRG00000020110	zgc:162879	99	74.545	Neolamprologus_brichardi
ENSAPEG00000017489	zgc:162879	99	78.429	ENSONIG00000015165	zgc:162879	100	78.429	Oreochromis_niloticus
ENSAPEG00000017489	zgc:162879	99	69.757	ENSORLG00015017960	zgc:162879	99	69.757	Oryzias_latipes_hsok
ENSAPEG00000017489	zgc:162879	99	58.269	ENSPKIG00000020661	zgc:162879	99	58.398	Paramormyrops_kingsleyae
ENSAPEG00000017489	zgc:162879	99	74.012	ENSPFOG00000006354	zgc:162879	98	74.012	Poecilia_formosa
ENSAPEG00000017489	zgc:162879	99	73.860	ENSPLAG00000020643	zgc:162879	98	73.860	Poecilia_latipinna
ENSAPEG00000017489	zgc:162879	99	73.556	ENSPMEG00000014713	zgc:162879	99	73.556	Poecilia_mexicana
ENSAPEG00000017489	zgc:162879	99	73.645	ENSPNYG00000010530	zgc:162879	99	73.795	Pundamilia_nyererei
ENSAPEG00000017489	zgc:162879	99	63.433	ENSPNAG00000012022	zgc:162879	99	63.433	Pygocentrus_nattereri
ENSAPEG00000017489	zgc:162879	85	51.903	ENSSFOG00015023774	zgc:162879	91	51.557	Scleropages_formosus
ENSAPEG00000017489	zgc:162879	99	80.880	ENSSMAG00000001513	zgc:162879	99	80.880	Scophthalmus_maximus
ENSAPEG00000017489	zgc:162879	99	86.646	ENSSDUG00000011478	zgc:162879	99	86.646	Seriola_dumerili
ENSAPEG00000017489	zgc:162879	99	86.646	ENSSLDG00000000877	zgc:162879	99	86.646	Seriola_lalandi_dorsalis
ENSAPEG00000017489	zgc:162879	100	83.056	ENSSPAG00000010598	zgc:162879	99	83.056	Stegastes_partitus
ENSAPEG00000017489	zgc:162879	99	70.555	ENSTNIG00000019239	zgc:162879	99	70.555	Tetraodon_nigroviridis
ENSAPEG00000017489	zgc:162879	99	42.340	ENSXETG00000015491	rasef	98	41.643	Xenopus_tropicalis
ENSAPEG00000017489	zgc:162879	79	67.063	ENSXCOG00000020244	zgc:162879	100	68.898	Xiphophorus_couchianus
ENSAPEG00000017489	zgc:162879	99	74.620	ENSXMAG00000002846	zgc:162879	99	74.620	Xiphophorus_maculatus