EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000017815 (Gene tree)
Gene ID: -
Gene Symbol: lig4
Alias: zgc:165595
Full Name: ligase IV%2C DNA%2C ATP-dependent
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 6921 bases
Position: chr24:12771804-12778724
Accession: ZDB-GENE-070820-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000025048	RNA_ligase	PF09414.10	7.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000025702	-	4599	-	ENSAPEP00000025048	908 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000017815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000017815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000017815	lig4	99	66.264	ENSG00000174405	LIG4	100	66.825	Homo_sapiens
ENSAPEG00000017815	lig4	100	97.907	ENSAPOG00000000866	lig4	100	97.907	Acanthochromis_polyacanthus
ENSAPEG00000017815	lig4	99	64.622	ENSAMEG00000019685	LIG4	99	64.294	Ailuropoda_melanoleuca
ENSAPEG00000017815	lig4	100	92.088	ENSACIG00000018309	lig4	100	92.088	Amphilophus_citrinellus
ENSAPEG00000017815	lig4	100	99.780	ENSAOCG00000011768	lig4	100	99.780	Amphiprion_ocellaris
ENSAPEG00000017815	lig4	100	90.000	ENSATEG00000005583	lig4	100	90.000	Anabas_testudineus
ENSAPEG00000017815	lig4	96	67.198	ENSAPLG00000001673	LIG4	99	67.198	Anas_platyrhynchos
ENSAPEG00000017815	lig4	99	66.519	ENSACAG00000014566	LIG4	99	66.519	Anolis_carolinensis
ENSAPEG00000017815	lig4	99	66.191	ENSANAG00000012446	LIG4	99	66.044	Aotus_nancymaae
ENSAPEG00000017815	lig4	100	90.220	ENSACLG00000027051	lig4	100	90.220	Astatotilapia_calliptera
ENSAPEG00000017815	lig4	100	80.044	ENSAMXG00000008192	lig4	95	80.044	Astyanax_mexicanus
ENSAPEG00000017815	lig4	99	65.824	ENSBTAG00000015868	LIG4	99	65.604	Bos_taurus
ENSAPEG00000017815	lig4	99	65.971	ENSCJAG00000014689	LIG4	99	65.752	Callithrix_jacchus
ENSAPEG00000017815	lig4	99	65.419	ENSCAFG00000006031	LIG4	99	65.198	Canis_familiaris
ENSAPEG00000017815	lig4	99	65.419	ENSCAFG00020021230	LIG4	99	65.198	Canis_lupus_dingo
ENSAPEG00000017815	lig4	99	65.714	ENSCHIG00000001019	LIG4	99	65.495	Capra_hircus
ENSAPEG00000017815	lig4	99	65.116	ENSCAPG00000006284	LIG4	99	64.895	Cavia_aperea
ENSAPEG00000017815	lig4	99	64.945	ENSCPOG00000014266	LIG4	99	64.725	Cavia_porcellus
ENSAPEG00000017815	lig4	99	66.154	ENSCCAG00000019971	LIG4	99	65.934	Cebus_capucinus
ENSAPEG00000017815	lig4	99	65.604	ENSCATG00000021075	LIG4	99	65.385	Cercocebus_atys
ENSAPEG00000017815	lig4	99	65.597	ENSCLAG00000003376	LIG4	99	65.376	Chinchilla_lanigera
ENSAPEG00000017815	lig4	99	65.308	ENSCSAG00000000211	LIG4	99	65.088	Chlorocebus_sabaeus
ENSAPEG00000017815	lig4	99	68.701	ENSCPBG00000023291	LIG4	100	68.053	Chrysemys_picta_bellii
ENSAPEG00000017815	lig4	69	47.235	ENSCING00000009536	-	96	47.235	Ciona_intestinalis
ENSAPEG00000017815	lig4	83	44.737	ENSCSAVG00000010336	-	98	44.737	Ciona_savignyi
ENSAPEG00000017815	lig4	99	65.088	ENSCANG00000005805	LIG4	99	64.868	Colobus_angolensis_palliatus
ENSAPEG00000017815	lig4	99	64.654	ENSCGRG00001012072	Lig4	99	64.654	Cricetulus_griseus_chok1gshd
ENSAPEG00000017815	lig4	99	64.654	ENSCGRG00000013417	Lig4	99	64.654	Cricetulus_griseus_crigri
ENSAPEG00000017815	lig4	97	86.246	ENSCSEG00000013905	lig4	96	86.246	Cynoglossus_semilaevis
ENSAPEG00000017815	lig4	100	89.109	ENSCVAG00000007896	lig4	100	89.109	Cyprinodon_variegatus
ENSAPEG00000017815	lig4	100	80.858	ENSDARG00000060620	lig4	100	80.858	Danio_rerio
ENSAPEG00000017815	lig4	99	65.313	ENSDNOG00000000513	LIG4	99	64.984	Dasypus_novemcinctus
ENSAPEG00000017815	lig4	99	65.338	ENSDORG00000027303	Lig4	99	65.227	Dipodomys_ordii
ENSAPEG00000017815	lig4	92	30.804	FBgn0030506	Lig4	93	30.804	Drosophila_melanogaster
ENSAPEG00000017815	lig4	98	63.455	ENSETEG00000015563	LIG4	100	63.566	Echinops_telfairi
ENSAPEG00000017815	lig4	99	44.025	ENSEBUG00000014243	lig4	99	44.025	Eptatretus_burgeri
ENSAPEG00000017815	lig4	99	65.093	ENSEASG00005022073	LIG4	99	64.984	Equus_asinus_asinus
ENSAPEG00000017815	lig4	99	64.984	ENSECAG00000003257	LIG4	99	64.874	Equus_caballus
ENSAPEG00000017815	lig4	98	84.316	ENSELUG00000006787	lig4	99	84.427	Esox_lucius
ENSAPEG00000017815	lig4	99	64.563	ENSFCAG00000031985	LIG4	99	64.230	Felis_catus
ENSAPEG00000017815	lig4	88	69.231	ENSFALG00000004214	LIG4	98	69.231	Ficedula_albicollis
ENSAPEG00000017815	lig4	99	64.615	ENSFDAG00000008973	LIG4	99	64.396	Fukomys_damarensis
ENSAPEG00000017815	lig4	100	88.145	ENSFHEG00000007398	lig4	91	88.145	Fundulus_heteroclitus
ENSAPEG00000017815	lig4	86	78.617	ENSGMOG00000012843	lig4	99	78.617	Gadus_morhua
ENSAPEG00000017815	lig4	99	66.703	ENSGALG00000016854	LIG4	99	66.703	Gallus_gallus
ENSAPEG00000017815	lig4	99	87.295	ENSGAFG00000019779	lig4	96	87.733	Gambusia_affinis
ENSAPEG00000017815	lig4	99	86.313	ENSGACG00000014135	lig4	99	86.645	Gasterosteus_aculeatus
ENSAPEG00000017815	lig4	99	66.044	ENSGGOG00000027771	LIG4	99	65.824	Gorilla_gorilla
ENSAPEG00000017815	lig4	100	90.000	ENSHBUG00000006245	lig4	100	90.000	Haplochromis_burtoni
ENSAPEG00000017815	lig4	99	64.835	ENSHGLG00000000718	LIG4	99	64.615	Heterocephalus_glaber_female
ENSAPEG00000017815	lig4	99	64.835	ENSHGLG00100003265	LIG4	99	64.615	Heterocephalus_glaber_male
ENSAPEG00000017815	lig4	100	83.991	ENSHCOG00000012010	lig4	100	83.991	Hippocampus_comes
ENSAPEG00000017815	lig4	100	79.208	ENSIPUG00000013748	lig4	100	79.208	Ictalurus_punctatus
ENSAPEG00000017815	lig4	99	65.495	ENSSTOG00000024303	LIG4	99	65.275	Ictidomys_tridecemlineatus
ENSAPEG00000017815	lig4	99	65.385	ENSJJAG00000006750	Lig4	99	65.055	Jaculus_jaculus
ENSAPEG00000017815	lig4	100	85.809	ENSKMAG00000001149	lig4	100	85.809	Kryptolebias_marmoratus
ENSAPEG00000017815	lig4	91	91.052	ENSLBEG00000014578	lig4	100	91.052	Labrus_bergylta
ENSAPEG00000017815	lig4	100	67.982	ENSLACG00000003282	LIG4	100	67.982	Latimeria_chalumnae
ENSAPEG00000017815	lig4	100	73.823	ENSLOCG00000008901	lig4	99	73.823	Lepisosteus_oculatus
ENSAPEG00000017815	lig4	99	63.956	ENSLAFG00000031152	LIG4	99	63.846	Loxodonta_africana
ENSAPEG00000017815	lig4	99	65.419	ENSMFAG00000037235	LIG4	99	65.198	Macaca_fascicularis
ENSAPEG00000017815	lig4	99	65.308	ENSMMUG00000008874	LIG4	99	65.088	Macaca_mulatta
ENSAPEG00000017815	lig4	99	65.419	ENSMNEG00000023575	LIG4	99	65.198	Macaca_nemestrina
ENSAPEG00000017815	lig4	99	65.198	ENSMLEG00000026720	LIG4	99	64.978	Mandrillus_leucophaeus
ENSAPEG00000017815	lig4	100	90.549	ENSMAMG00000008472	lig4	99	90.549	Mastacembelus_armatus
ENSAPEG00000017815	lig4	100	90.110	ENSMZEG00005001855	lig4	99	90.209	Maylandia_zebra
ENSAPEG00000017815	lig4	100	66.228	ENSMGAG00000015532	LIG4	100	66.228	Meleagris_gallopavo
ENSAPEG00000017815	lig4	99	63.956	ENSMOCG00000019000	Lig4	99	63.956	Microtus_ochrogaster
ENSAPEG00000017815	lig4	100	88.791	ENSMMOG00000004390	lig4	100	88.791	Mola_mola
ENSAPEG00000017815	lig4	99	65.899	ENSMODG00000025064	LIG4	99	66.009	Monodelphis_domestica
ENSAPEG00000017815	lig4	100	89.341	ENSMALG00000008555	lig4	100	89.341	Monopterus_albus
ENSAPEG00000017815	lig4	99	64.945	MGP_CAROLIEiJ_G0030809	Lig4	99	64.835	Mus_caroli
ENSAPEG00000017815	lig4	99	64.835	ENSMUSG00000049717	Lig4	99	64.725	Mus_musculus
ENSAPEG00000017815	lig4	99	64.835	MGP_PahariEiJ_G0021270	Lig4	99	64.835	Mus_pahari
ENSAPEG00000017815	lig4	99	65.055	MGP_SPRETEiJ_G0031917	Lig4	99	64.945	Mus_spretus
ENSAPEG00000017815	lig4	99	64.648	ENSMPUG00000018675	LIG4	99	64.317	Mustela_putorius_furo
ENSAPEG00000017815	lig4	99	65.862	ENSMLUG00000001267	LIG4	99	65.642	Myotis_lucifugus
ENSAPEG00000017815	lig4	99	65.449	ENSNGAG00000013258	Lig4	99	65.338	Nannospalax_galili
ENSAPEG00000017815	lig4	100	90.220	ENSNBRG00000021252	lig4	100	90.220	Neolamprologus_brichardi
ENSAPEG00000017815	lig4	99	65.385	ENSNLEG00000007888	LIG4	99	65.165	Nomascus_leucogenys
ENSAPEG00000017815	lig4	99	64.491	ENSOPRG00000005765	LIG4	99	64.381	Ochotona_princeps
ENSAPEG00000017815	lig4	99	64.934	ENSODEG00000019683	LIG4	99	64.712	Octodon_degus
ENSAPEG00000017815	lig4	99	90.979	ENSONIG00000011969	lig4	99	90.979	Oreochromis_niloticus
ENSAPEG00000017815	lig4	99	65.597	ENSOCUG00000015734	LIG4	99	65.487	Oryctolagus_cuniculus
ENSAPEG00000017815	lig4	99	85.714	ENSORLG00000004041	lig4	99	85.714	Oryzias_latipes
ENSAPEG00000017815	lig4	99	85.714	ENSORLG00020019607	lig4	99	85.714	Oryzias_latipes_hni
ENSAPEG00000017815	lig4	99	86.044	ENSORLG00015017754	lig4	99	86.044	Oryzias_latipes_hsok
ENSAPEG00000017815	lig4	76	90.539	ENSOMEG00000003459	lig4	99	90.539	Oryzias_melastigma
ENSAPEG00000017815	lig4	99	65.755	ENSOGAG00000032120	LIG4	99	65.646	Otolemur_garnettii
ENSAPEG00000017815	lig4	82	69.624	ENSOARG00000005590	LIG4	98	69.624	Ovis_aries
ENSAPEG00000017815	lig4	99	66.044	ENSPPAG00000032998	LIG4	99	65.824	Pan_paniscus
ENSAPEG00000017815	lig4	99	65.116	ENSPPRG00000017804	LIG4	99	64.784	Panthera_pardus
ENSAPEG00000017815	lig4	99	65.006	ENSPTIG00000010051	LIG4	99	64.673	Panthera_tigris_altaica
ENSAPEG00000017815	lig4	99	66.154	ENSPTRG00000006025	LIG4	99	65.934	Pan_troglodytes
ENSAPEG00000017815	lig4	99	65.714	ENSPANG00000007562	LIG4	99	65.495	Papio_anubis
ENSAPEG00000017815	lig4	100	78.658	ENSPKIG00000011645	lig4	99	78.658	Paramormyrops_kingsleyae
ENSAPEG00000017815	lig4	100	67.982	ENSPSIG00000001504	LIG4	99	68.102	Pelodiscus_sinensis
ENSAPEG00000017815	lig4	98	81.166	ENSPMGG00000013486	lig4	100	80.504	Periophthalmus_magnuspinnatus
ENSAPEG00000017815	lig4	99	64.026	ENSPEMG00000000076	Lig4	99	63.916	Peromyscus_maniculatus_bairdii
ENSAPEG00000017815	lig4	99	65.597	ENSPCIG00000021882	LIG4	99	65.487	Phascolarctos_cinereus
ENSAPEG00000017815	lig4	100	88.596	ENSPFOG00000000797	lig4	100	89.035	Poecilia_formosa
ENSAPEG00000017815	lig4	100	88.487	ENSPLAG00000001196	lig4	100	88.925	Poecilia_latipinna
ENSAPEG00000017815	lig4	100	88.706	ENSPMEG00000021353	lig4	100	89.145	Poecilia_mexicana
ENSAPEG00000017815	lig4	100	87.719	ENSPREG00000007323	lig4	100	88.268	Poecilia_reticulata
ENSAPEG00000017815	lig4	99	65.385	ENSPPYG00000005540	LIG4	99	65.165	Pongo_abelii
ENSAPEG00000017815	lig4	99	64.796	ENSPVAG00000016403	LIG4	99	64.576	Pteropus_vampyrus
ENSAPEG00000017815	lig4	100	90.220	ENSPNYG00000009660	lig4	100	90.220	Pundamilia_nyererei
ENSAPEG00000017815	lig4	99	82.589	ENSPNAG00000028069	LIG4	99	82.589	Pygocentrus_nattereri
ENSAPEG00000017815	lig4	99	82.589	ENSPNAG00000028056	lig4	99	82.589	Pygocentrus_nattereri
ENSAPEG00000017815	lig4	99	65.006	ENSRNOG00000014605	Lig4	99	64.725	Rattus_norvegicus
ENSAPEG00000017815	lig4	99	64.758	ENSRBIG00000039962	LIG4	99	64.537	Rhinopithecus_bieti
ENSAPEG00000017815	lig4	99	65.308	ENSRROG00000006040	LIG4	99	65.088	Rhinopithecus_roxellana
ENSAPEG00000017815	lig4	99	65.862	ENSSBOG00000019029	LIG4	99	65.642	Saimiri_boliviensis_boliviensis
ENSAPEG00000017815	lig4	99	63.274	ENSSHAG00000009525	LIG4	99	63.385	Sarcophilus_harrisii
ENSAPEG00000017815	lig4	100	80.088	ENSSFOG00015012835	lig4	100	80.088	Scleropages_formosus
ENSAPEG00000017815	lig4	100	84.912	ENSSMAG00000011267	lig4	100	84.912	Scophthalmus_maximus
ENSAPEG00000017815	lig4	100	89.387	ENSSDUG00000010343	lig4	100	89.606	Seriola_dumerili
ENSAPEG00000017815	lig4	100	88.293	ENSSLDG00000003239	lig4	100	88.293	Seriola_lalandi_dorsalis
ENSAPEG00000017815	lig4	99	64.294	ENSSARG00000006573	LIG4	99	64.074	Sorex_araneus
ENSAPEG00000017815	lig4	92	69.167	ENSSPUG00000002444	LIG4	100	69.048	Sphenodon_punctatus
ENSAPEG00000017815	lig4	100	93.846	ENSSPAG00000001609	lig4	100	93.846	Stegastes_partitus
ENSAPEG00000017815	lig4	99	65.347	ENSSSCG00000009540	LIG4	99	65.017	Sus_scrofa
ENSAPEG00000017815	lig4	99	66.556	ENSTGUG00000010795	LIG4	100	66.556	Taeniopygia_guttata
ENSAPEG00000017815	lig4	100	87.253	ENSTRUG00000009984	lig4	100	87.253	Takifugu_rubripes
ENSAPEG00000017815	lig4	100	84.802	ENSTNIG00000010348	lig4	100	85.022	Tetraodon_nigroviridis
ENSAPEG00000017815	lig4	99	65.752	ENSTBEG00000017741	LIG4	99	65.752	Tupaia_belangeri
ENSAPEG00000017815	lig4	99	65.275	ENSTTRG00000012660	LIG4	99	65.055	Tursiops_truncatus
ENSAPEG00000017815	lig4	99	64.576	ENSUAMG00000003773	LIG4	99	64.246	Ursus_americanus
ENSAPEG00000017815	lig4	100	67.654	ENSXETG00000002654	lig4	100	67.654	Xenopus_tropicalis
ENSAPEG00000017815	lig4	100	88.158	ENSXCOG00000017401	lig4	100	88.596	Xiphophorus_couchianus
ENSAPEG00000017815	lig4	100	88.487	ENSXMAG00000015142	lig4	99	88.925	Xiphophorus_maculatus