EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000018304 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 36620 bases
Position: chr3:25573175-25609794
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000025782	RRM_1	PF00076.22	2.7e-39	1	3
ENSAPEP00000025782	RRM_1	PF00076.22	2.7e-39	2	3
ENSAPEP00000025782	RRM_1	PF00076.22	2.7e-39	3	3
ENSAPEP00000025761	RRM_1	PF00076.22	2.9e-39	1	3
ENSAPEP00000025761	RRM_1	PF00076.22	2.9e-39	2	3
ENSAPEP00000025761	RRM_1	PF00076.22	2.9e-39	3	3
ENSAPEP00000025801	RRM_1	PF00076.22	3.9e-39	1	3
ENSAPEP00000025801	RRM_1	PF00076.22	3.9e-39	2	3
ENSAPEP00000025801	RRM_1	PF00076.22	3.9e-39	3	3
ENSAPEP00000025750	RRM_1	PF00076.22	4.6e-39	1	3
ENSAPEP00000025750	RRM_1	PF00076.22	4.6e-39	2	3
ENSAPEP00000025750	RRM_1	PF00076.22	4.6e-39	3	3
ENSAPEP00000025729	RRM_1	PF00076.22	4.8e-39	1	3
ENSAPEP00000025729	RRM_1	PF00076.22	4.8e-39	2	3
ENSAPEP00000025729	RRM_1	PF00076.22	4.8e-39	3	3
ENSAPEP00000025772	RRM_1	PF00076.22	4.8e-39	1	3
ENSAPEP00000025772	RRM_1	PF00076.22	4.8e-39	2	3
ENSAPEP00000025772	RRM_1	PF00076.22	4.8e-39	3	3
ENSAPEP00000025789	RRM_1	PF00076.22	4.8e-39	1	3
ENSAPEP00000025789	RRM_1	PF00076.22	4.8e-39	2	3
ENSAPEP00000025789	RRM_1	PF00076.22	4.8e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000026468	-	5047	-	ENSAPEP00000025789	615 (aa)	-	-
ENSAPET00000026451	-	5068	-	ENSAPEP00000025772	615 (aa)	-	-
ENSAPET00000026440	-	5271	-	ENSAPEP00000025761	545 (aa)	-	-
ENSAPET00000026461	-	4834	-	ENSAPEP00000025782	537 (aa)	-	-
ENSAPET00000026429	-	5454	-	ENSAPEP00000025750	606 (aa)	-	-
ENSAPET00000026480	-	1767	-	ENSAPEP00000025801	588 (aa)	-	-
ENSAPET00000026408	-	5481	-	ENSAPEP00000025729	615 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000018304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000018304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000018304	rbm47	55	53.974	ENSAPEG00000020251	syncripl	73	47.277
ENSAPEG00000018304	rbm47	55	52.980	ENSAPEG00000021185	syncrip	67	44.498
ENSAPEG00000018304	rbm47	80	51.361	ENSAPEG00000009537	a1cf	91	53.211
ENSAPEG00000018304	rbm47	56	54.248	ENSAPEG00000009187	hnrnpr	68	45.561
ENSAPEG00000018304	rbm47	57	64.821	ENSAPEG00000017762	rbm46	68	64.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000018304	rbm47	100	81.383	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSAPEG00000018304	rbm47	100	99.748	ENSAPOG00000011062	rbm47	100	99.743	Acanthochromis_polyacanthus
ENSAPEG00000018304	rbm47	93	84.225	ENSAMEG00000009672	RBM47	100	76.744	Ailuropoda_melanoleuca
ENSAPEG00000018304	rbm47	100	96.774	ENSACIG00000011531	rbm47	100	96.774	Amphilophus_citrinellus
ENSAPEG00000018304	rbm47	100	100.000	ENSAOCG00000022245	rbm47	100	100.000	Amphiprion_ocellaris
ENSAPEG00000018304	rbm47	100	97.172	ENSATEG00000018400	rbm47	100	97.172	Anabas_testudineus
ENSAPEG00000018304	rbm47	100	77.963	ENSAPLG00000013974	RBM47	100	77.295	Anas_platyrhynchos
ENSAPEG00000018304	rbm47	100	78.517	ENSACAG00000011833	RBM47	100	76.872	Anolis_carolinensis
ENSAPEG00000018304	rbm47	100	82.933	ENSANAG00000029440	RBM47	100	81.330	Aotus_nancymaae
ENSAPEG00000018304	rbm47	100	94.087	ENSACLG00000016902	rbm47	100	94.087	Astatotilapia_calliptera
ENSAPEG00000018304	rbm47	100	83.166	ENSAMXG00000021794	rbm47	100	86.041	Astyanax_mexicanus
ENSAPEG00000018304	rbm47	100	79.847	ENSBTAG00000002356	RBM47	100	78.319	Bos_taurus
ENSAPEG00000018304	rbm47	98	84.444	ENSCJAG00000019385	RBM47	100	81.330	Callithrix_jacchus
ENSAPEG00000018304	rbm47	93	84.986	ENSCAFG00000015898	RBM47	100	78.224	Canis_familiaris
ENSAPEG00000018304	rbm47	83	80.488	ENSCAFG00020010558	RBM47	94	82.493	Canis_lupus_dingo
ENSAPEG00000018304	rbm47	100	79.847	ENSCHIG00000026214	RBM47	100	78.319	Capra_hircus
ENSAPEG00000018304	rbm47	84	86.547	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSAPEG00000018304	rbm47	100	72.773	ENSCAPG00000008426	RBM47	100	72.269	Cavia_aperea
ENSAPEG00000018304	rbm47	100	82.667	ENSCPOG00000014100	RBM47	100	77.685	Cavia_porcellus
ENSAPEG00000018304	rbm47	100	83.733	ENSCCAG00000030129	-	100	81.378	Cebus_capucinus
ENSAPEG00000018304	rbm47	99	56.229	ENSCCAG00000024397	-	99	55.556	Cebus_capucinus
ENSAPEG00000018304	rbm47	100	81.383	ENSCATG00000042064	RBM47	100	81.633	Cercocebus_atys
ENSAPEG00000018304	rbm47	100	81.698	ENSCLAG00000001684	RBM47	100	82.911	Chinchilla_lanigera
ENSAPEG00000018304	rbm47	93	84.746	ENSCSAG00000017060	RBM47	100	77.796	Chlorocebus_sabaeus
ENSAPEG00000018304	rbm47	89	74.550	ENSCHOG00000011731	RBM47	88	76.906	Choloepus_hoffmanni
ENSAPEG00000018304	rbm47	100	82.908	ENSCPBG00000013831	RBM47	100	79.833	Chrysemys_picta_bellii
ENSAPEG00000018304	rbm47	100	82.540	ENSCANG00000019997	RBM47	100	81.633	Colobus_angolensis_palliatus
ENSAPEG00000018304	rbm47	100	77.188	ENSCGRG00001020102	-	100	78.780	Cricetulus_griseus_chok1gshd
ENSAPEG00000018304	rbm47	100	82.447	ENSCGRG00001000623	-	100	80.867	Cricetulus_griseus_chok1gshd
ENSAPEG00000018304	rbm47	100	75.833	ENSCGRG00000007762	-	100	80.380	Cricetulus_griseus_crigri
ENSAPEG00000018304	rbm47	100	76.923	ENSCGRG00000014760	-	100	78.515	Cricetulus_griseus_crigri
ENSAPEG00000018304	rbm47	100	91.540	ENSCSEG00000004545	rbm47	100	91.709	Cynoglossus_semilaevis
ENSAPEG00000018304	rbm47	100	95.373	ENSCVAG00000020144	rbm47	100	95.373	Cyprinodon_variegatus
ENSAPEG00000018304	rbm47	100	86.957	ENSDARG00000061985	rbm47	100	87.212	Danio_rerio
ENSAPEG00000018304	rbm47	93	85.674	ENSDNOG00000046854	RBM47	100	79.125	Dasypus_novemcinctus
ENSAPEG00000018304	rbm47	100	79.494	ENSDORG00000010144	Rbm47	100	77.205	Dipodomys_ordii
ENSAPEG00000018304	rbm47	93	82.682	ENSETEG00000009194	RBM47	100	77.667	Echinops_telfairi
ENSAPEG00000018304	rbm47	91	74.640	ENSEBUG00000011912	rbm47	95	74.640	Eptatretus_burgeri
ENSAPEG00000018304	rbm47	93	85.393	ENSEASG00005008443	RBM47	100	78.319	Equus_asinus_asinus
ENSAPEG00000018304	rbm47	93	85.393	ENSECAG00000004400	RBM47	100	78.319	Equus_caballus
ENSAPEG00000018304	rbm47	75	82.684	ENSEEUG00000001194	RBM47	75	84.848	Erinaceus_europaeus
ENSAPEG00000018304	rbm47	100	89.873	ENSELUG00000006148	rbm47	100	89.873	Esox_lucius
ENSAPEG00000018304	rbm47	100	77.234	ENSFCAG00000012399	RBM47	100	78.583	Felis_catus
ENSAPEG00000018304	rbm47	100	82.143	ENSFALG00000002861	RBM47	100	79.299	Ficedula_albicollis
ENSAPEG00000018304	rbm47	100	81.432	ENSFDAG00000016326	RBM47	100	76.510	Fukomys_damarensis
ENSAPEG00000018304	rbm47	100	93.573	ENSFHEG00000007938	rbm47	100	90.832	Fundulus_heteroclitus
ENSAPEG00000018304	rbm47	100	88.579	ENSGMOG00000014802	rbm47	100	88.579	Gadus_morhua
ENSAPEG00000018304	rbm47	72	82.443	ENSGALG00000014267	RBM47	99	85.450	Gallus_gallus
ENSAPEG00000018304	rbm47	72	89.487	ENSGAFG00000020571	rbm47	98	93.531	Gambusia_affinis
ENSAPEG00000018304	rbm47	100	94.087	ENSGACG00000016223	rbm47	100	94.087	Gasterosteus_aculeatus
ENSAPEG00000018304	rbm47	100	82.908	ENSGAGG00000020051	RBM47	100	79.833	Gopherus_agassizii
ENSAPEG00000018304	rbm47	100	81.383	ENSGGOG00000001367	RBM47	100	81.633	Gorilla_gorilla
ENSAPEG00000018304	rbm47	100	94.087	ENSHBUG00000003520	rbm47	100	94.087	Haplochromis_burtoni
ENSAPEG00000018304	rbm47	100	61.481	ENSHGLG00000016914	RBM47	100	80.000	Heterocephalus_glaber_female
ENSAPEG00000018304	rbm47	100	82.493	ENSHGLG00100014028	-	100	80.203	Heterocephalus_glaber_male
ENSAPEG00000018304	rbm47	100	76.471	ENSHGLG00100003071	-	100	69.799	Heterocephalus_glaber_male
ENSAPEG00000018304	rbm47	99	95.887	ENSHCOG00000002074	rbm47	99	95.887	Hippocampus_comes
ENSAPEG00000018304	rbm47	100	87.724	ENSIPUG00000004743	rbm47	100	87.724	Ictalurus_punctatus
ENSAPEG00000018304	rbm47	100	81.167	ENSSTOG00000004727	RBM47	100	81.330	Ictidomys_tridecemlineatus
ENSAPEG00000018304	rbm47	93	85.634	ENSJJAG00000013823	Rbm47	100	76.167	Jaculus_jaculus
ENSAPEG00000018304	rbm47	100	95.128	ENSKMAG00000000084	rbm47	100	95.128	Kryptolebias_marmoratus
ENSAPEG00000018304	rbm47	100	95.128	ENSLBEG00000008436	rbm47	100	95.128	Labrus_bergylta
ENSAPEG00000018304	rbm47	93	87.955	ENSLACG00000007196	RBM47	100	79.832	Latimeria_chalumnae
ENSAPEG00000018304	rbm47	100	83.670	ENSLOCG00000012966	rbm47	95	83.333	Lepisosteus_oculatus
ENSAPEG00000018304	rbm47	100	78.772	ENSLAFG00000011998	RBM47	100	77.759	Loxodonta_africana
ENSAPEG00000018304	rbm47	100	81.383	ENSMFAG00000037967	RBM47	100	81.633	Macaca_fascicularis
ENSAPEG00000018304	rbm47	93	84.746	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSAPEG00000018304	rbm47	100	81.117	ENSMNEG00000040774	RBM47	100	81.633	Macaca_nemestrina
ENSAPEG00000018304	rbm47	100	83.175	ENSMLEG00000041432	RBM47	100	85.079	Mandrillus_leucophaeus
ENSAPEG00000018304	rbm47	100	96.658	ENSMAMG00000019143	rbm47	100	96.658	Mastacembelus_armatus
ENSAPEG00000018304	rbm47	100	94.087	ENSMZEG00005023659	rbm47	100	93.955	Maylandia_zebra
ENSAPEG00000018304	rbm47	100	82.398	ENSMGAG00000012226	RBM47	100	78.904	Meleagris_gallopavo
ENSAPEG00000018304	rbm47	100	81.794	ENSMAUG00000006493	Rbm47	100	82.850	Mesocricetus_auratus
ENSAPEG00000018304	rbm47	100	79.357	ENSMICG00000026417	RBM47	100	79.284	Microcebus_murinus
ENSAPEG00000018304	rbm47	100	81.746	ENSMOCG00000021170	Rbm47	100	82.540	Microtus_ochrogaster
ENSAPEG00000018304	rbm47	100	94.859	ENSMMOG00000007260	rbm47	100	94.859	Mola_mola
ENSAPEG00000018304	rbm47	57	78.135	ENSMODG00000015426	-	97	78.135	Monodelphis_domestica
ENSAPEG00000018304	rbm47	100	75.426	ENSMODG00000020561	-	100	73.445	Monodelphis_domestica
ENSAPEG00000018304	rbm47	100	81.841	ENSMODG00000007003	RBM47	100	78.595	Monodelphis_domestica
ENSAPEG00000018304	rbm47	100	95.373	ENSMALG00000005167	rbm47	100	95.373	Monopterus_albus
ENSAPEG00000018304	rbm47	100	82.713	MGP_CAROLIEiJ_G0027258	Rbm47	100	83.777	Mus_caroli
ENSAPEG00000018304	rbm47	100	82.713	ENSMUSG00000070780	Rbm47	100	83.777	Mus_musculus
ENSAPEG00000018304	rbm47	100	82.447	MGP_PahariEiJ_G0017040	Rbm47	100	83.511	Mus_pahari
ENSAPEG00000018304	rbm47	100	82.713	MGP_SPRETEiJ_G0028253	Rbm47	100	83.777	Mus_spretus
ENSAPEG00000018304	rbm47	93	85.070	ENSMPUG00000006177	RBM47	94	77.052	Mustela_putorius_furo
ENSAPEG00000018304	rbm47	100	80.916	ENSMLUG00000000889	RBM47	100	79.062	Myotis_lucifugus
ENSAPEG00000018304	rbm47	100	80.102	ENSNGAG00000003325	Rbm47	100	76.294	Nannospalax_galili
ENSAPEG00000018304	rbm47	100	94.602	ENSNBRG00000015092	rbm47	100	93.475	Neolamprologus_brichardi
ENSAPEG00000018304	rbm47	100	81.383	ENSNLEG00000017151	RBM47	100	81.633	Nomascus_leucogenys
ENSAPEG00000018304	rbm47	66	87.288	ENSMEUG00000009516	-	99	80.425	Notamacropus_eugenii
ENSAPEG00000018304	rbm47	86	85.892	ENSOPRG00000016507	-	75	85.892	Ochotona_princeps
ENSAPEG00000018304	rbm47	93	84.225	ENSODEG00000004873	RBM47	100	77.983	Octodon_degus
ENSAPEG00000018304	rbm47	100	95.630	ENSONIG00000009061	rbm47	100	94.253	Oreochromis_niloticus
ENSAPEG00000018304	rbm47	100	81.074	ENSOANG00000008978	RBM47	100	79.097	Ornithorhynchus_anatinus
ENSAPEG00000018304	rbm47	100	79.284	ENSOCUG00000012034	RBM47	100	78.057	Oryctolagus_cuniculus
ENSAPEG00000018304	rbm47	100	94.615	ENSORLG00000005847	rbm47	100	94.615	Oryzias_latipes
ENSAPEG00000018304	rbm47	100	94.615	ENSORLG00020005154	rbm47	100	94.615	Oryzias_latipes_hni
ENSAPEG00000018304	rbm47	100	94.359	ENSORLG00015000066	rbm47	100	94.359	Oryzias_latipes_hsok
ENSAPEG00000018304	rbm47	100	94.207	ENSOMEG00000010730	rbm47	100	94.087	Oryzias_melastigma
ENSAPEG00000018304	rbm47	93	78.873	ENSOGAG00000025193	-	100	71.838	Otolemur_garnettii
ENSAPEG00000018304	rbm47	93	84.789	ENSOGAG00000029367	-	100	77.219	Otolemur_garnettii
ENSAPEG00000018304	rbm47	100	69.748	ENSOARG00000012711	RBM47	100	70.924	Ovis_aries
ENSAPEG00000018304	rbm47	93	84.746	ENSPPAG00000029763	RBM47	95	84.309	Pan_paniscus
ENSAPEG00000018304	rbm47	100	81.266	ENSPPRG00000012873	RBM47	99	83.467	Panthera_pardus
ENSAPEG00000018304	rbm47	86	77.183	ENSPTIG00000017046	RBM47	100	77.183	Panthera_tigris_altaica
ENSAPEG00000018304	rbm47	100	81.383	ENSPTRG00000016006	RBM47	100	81.633	Pan_troglodytes
ENSAPEG00000018304	rbm47	100	81.383	ENSPANG00000005980	RBM47	100	81.633	Papio_anubis
ENSAPEG00000018304	rbm47	100	83.805	ENSPKIG00000013431	RBM47	98	83.805	Paramormyrops_kingsleyae
ENSAPEG00000018304	rbm47	95	87.535	ENSPKIG00000005037	rbm47	100	83.846	Paramormyrops_kingsleyae
ENSAPEG00000018304	rbm47	88	82.653	ENSPSIG00000017516	RBM47	97	81.544	Pelodiscus_sinensis
ENSAPEG00000018304	rbm47	100	92.020	ENSPMGG00000018540	rbm47	100	92.190	Periophthalmus_magnuspinnatus
ENSAPEG00000018304	rbm47	100	81.481	ENSPEMG00000011088	Rbm47	100	82.540	Peromyscus_maniculatus_bairdii
ENSAPEG00000018304	rbm47	100	93.573	ENSPFOG00000007997	rbm47	100	93.573	Poecilia_formosa
ENSAPEG00000018304	rbm47	100	93.316	ENSPLAG00000002072	rbm47	100	92.973	Poecilia_latipinna
ENSAPEG00000018304	rbm47	100	93.316	ENSPMEG00000017492	rbm47	100	93.316	Poecilia_mexicana
ENSAPEG00000018304	rbm47	100	93.573	ENSPREG00000008456	rbm47	100	93.573	Poecilia_reticulata
ENSAPEG00000018304	rbm47	99	67.905	ENSPPYG00000014688	RBM47	100	68.182	Pongo_abelii
ENSAPEG00000018304	rbm47	89	78.141	ENSPCAG00000011879	RBM47	81	83.960	Procavia_capensis
ENSAPEG00000018304	rbm47	100	81.117	ENSPCOG00000023451	RBM47	100	83.245	Propithecus_coquereli
ENSAPEG00000018304	rbm47	93	83.473	ENSPVAG00000003812	RBM47	100	77.090	Pteropus_vampyrus
ENSAPEG00000018304	rbm47	100	94.087	ENSPNYG00000022868	rbm47	100	93.008	Pundamilia_nyererei
ENSAPEG00000018304	rbm47	99	86.957	ENSPNAG00000007940	rbm47	100	87.500	Pygocentrus_nattereri
ENSAPEG00000018304	rbm47	100	79.695	ENSRNOG00000002408	Rbm47	100	77.295	Rattus_norvegicus
ENSAPEG00000018304	rbm47	100	82.540	ENSRBIG00000039601	RBM47	100	81.633	Rhinopithecus_bieti
ENSAPEG00000018304	rbm47	100	82.540	ENSRROG00000044696	RBM47	100	81.633	Rhinopithecus_roxellana
ENSAPEG00000018304	rbm47	100	75.042	ENSSBOG00000028475	RBM47	100	81.031	Saimiri_boliviensis_boliviensis
ENSAPEG00000018304	rbm47	100	82.097	ENSSHAG00000017576	RBM47	100	82.097	Sarcophilus_harrisii
ENSAPEG00000018304	rbm47	100	79.470	ENSSFOG00015012445	rbm47	100	84.655	Scleropages_formosus
ENSAPEG00000018304	rbm47	99	80.409	ENSSFOG00015024101	RBM47	99	83.880	Scleropages_formosus
ENSAPEG00000018304	rbm47	100	95.630	ENSSMAG00000009744	rbm47	100	95.630	Scophthalmus_maximus
ENSAPEG00000018304	rbm47	100	95.968	ENSSDUG00000022684	rbm47	100	95.968	Seriola_dumerili
ENSAPEG00000018304	rbm47	100	97.284	ENSSLDG00000003109	rbm47	100	97.284	Seriola_lalandi_dorsalis
ENSAPEG00000018304	rbm47	85	79.955	ENSSARG00000001735	RBM47	75	82.183	Sorex_araneus
ENSAPEG00000018304	rbm47	100	83.947	ENSSPUG00000007515	RBM47	100	84.392	Sphenodon_punctatus
ENSAPEG00000018304	rbm47	100	98.489	ENSSPAG00000001257	rbm47	100	98.489	Stegastes_partitus
ENSAPEG00000018304	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	77.983	Sus_scrofa
ENSAPEG00000018304	rbm47	100	81.888	ENSTGUG00000008705	RBM47	100	78.930	Taeniopygia_guttata
ENSAPEG00000018304	rbm47	100	91.341	ENSTRUG00000014050	rbm47	100	91.171	Takifugu_rubripes
ENSAPEG00000018304	rbm47	100	93.059	ENSTNIG00000006127	rbm47	100	91.612	Tetraodon_nigroviridis
ENSAPEG00000018304	rbm47	81	83.051	ENSTBEG00000001607	RBM47	76	82.133	Tupaia_belangeri
ENSAPEG00000018304	rbm47	100	78.451	ENSTTRG00000002839	RBM47	100	78.451	Tursiops_truncatus
ENSAPEG00000018304	rbm47	93	84.225	ENSUAMG00000021346	RBM47	100	77.052	Ursus_americanus
ENSAPEG00000018304	rbm47	52	82.540	ENSVPAG00000000641	-	56	79.310	Vicugna_pacos
ENSAPEG00000018304	rbm47	93	85.269	ENSVVUG00000014774	RBM47	100	78.523	Vulpes_vulpes
ENSAPEG00000018304	rbm47	100	81.726	ENSXETG00000012802	rbm47	100	78.130	Xenopus_tropicalis
ENSAPEG00000018304	rbm47	100	93.784	ENSXCOG00000000780	rbm47	100	93.784	Xiphophorus_couchianus
ENSAPEG00000018304	rbm47	100	94.087	ENSXMAG00000009874	rbm47	100	94.087	Xiphophorus_maculatus