EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000018582 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 10010 bases
Position: chr24:13298817-13308826
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000026203	RNase_Zc3h12a	PF11977.8	8.1e-56	1	1
ENSAPEP00000026235	RNase_Zc3h12a	PF11977.8	2.4e-53	1	1
ENSAPEP00000026215	RNase_Zc3h12a	PF11977.8	2.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000026891	-	1908	-	ENSAPEP00000026203	635 (aa)	-	-
ENSAPET00000026903	-	1821	-	ENSAPEP00000026215	606 (aa)	-	-
ENSAPET00000026924	-	1785	-	ENSAPEP00000026235	594 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000018582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000018582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000018582	-	100	100.000	ENSAPEG00000005727	-	85	90.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000018582	-	99	47.360	ENSAPOG00000001632	-	65	86.916	Acanthochromis_polyacanthus
ENSAPEG00000018582	-	78	95.976	ENSAPOG00000015355	-	54	95.976	Acanthochromis_polyacanthus
ENSAPEG00000018582	-	100	85.260	ENSACIG00000001362	-	69	84.925	Amphilophus_citrinellus
ENSAPEG00000018582	-	100	97.830	ENSAOCG00000003866	-	72	94.044	Amphiprion_ocellaris
ENSAPEG00000018582	-	99	48.714	ENSATEG00000002260	-	54	88.318	Anabas_testudineus
ENSAPEG00000018582	-	100	86.496	ENSATEG00000004134	-	72	81.662	Anabas_testudineus
ENSAPEG00000018582	-	76	64.045	ENSACLG00000018493	-	66	56.782	Astatotilapia_calliptera
ENSAPEG00000018582	-	99	86.441	ENSACLG00000027924	-	72	80.401	Astatotilapia_calliptera
ENSAPEG00000018582	-	99	83.607	ENSCSEG00000010073	-	84	73.237	Cynoglossus_semilaevis
ENSAPEG00000018582	-	99	76.266	ENSCVAG00000002328	-	73	74.964	Cyprinodon_variegatus
ENSAPEG00000018582	-	100	58.485	ENSELUG00000009319	-	83	59.480	Esox_lucius
ENSAPEG00000018582	-	100	50.445	ENSELUG00000005470	-	74	51.009	Esox_lucius
ENSAPEG00000018582	-	99	84.211	ENSFHEG00000021225	-	75	74.123	Fundulus_heteroclitus
ENSAPEG00000018582	-	100	50.404	ENSGMOG00000017975	-	99	50.651	Gadus_morhua
ENSAPEG00000018582	-	99	80.702	ENSGAFG00000005290	-	74	74.747	Gambusia_affinis
ENSAPEG00000018582	-	99	50.980	ENSGACG00000001339	-	99	50.162	Gasterosteus_aculeatus
ENSAPEG00000018582	-	100	80.165	ENSGACG00000014201	-	99	80.826	Gasterosteus_aculeatus
ENSAPEG00000018582	-	99	86.441	ENSHBUG00000006831	-	72	80.401	Haplochromis_burtoni
ENSAPEG00000018582	-	99	69.365	ENSHCOG00000008878	-	70	69.475	Hippocampus_comes
ENSAPEG00000018582	-	99	76.122	ENSKMAG00000011694	-	73	76.556	Kryptolebias_marmoratus
ENSAPEG00000018582	-	99	46.906	ENSLBEG00000012710	-	53	64.578	Labrus_bergylta
ENSAPEG00000018582	-	99	79.395	ENSLBEG00000003547	-	71	79.683	Labrus_bergylta
ENSAPEG00000018582	-	99	79.107	ENSLBEG00000012554	-	86	79.539	Labrus_bergylta
ENSAPEG00000018582	-	67	65.233	ENSLACG00000017365	ZC3H12A	61	70.120	Latimeria_chalumnae
ENSAPEG00000018582	-	99	83.896	ENSMAMG00000021794	-	71	83.896	Mastacembelus_armatus
ENSAPEG00000018582	-	99	46.657	ENSMAMG00000020372	-	72	47.330	Mastacembelus_armatus
ENSAPEG00000018582	-	99	86.441	ENSMZEG00005007718	-	72	80.258	Maylandia_zebra
ENSAPEG00000018582	-	76	64.045	ENSMZEG00005019137	-	85	45.887	Maylandia_zebra
ENSAPEG00000018582	-	99	49.394	ENSMMOG00000019526	-	69	50.150	Mola_mola
ENSAPEG00000018582	-	99	88.136	ENSMMOG00000005728	-	85	77.318	Mola_mola
ENSAPEG00000018582	-	99	78.592	ENSMALG00000010501	-	72	78.879	Monopterus_albus
ENSAPEG00000018582	-	76	60.845	ENSNBRG00000012175	-	52	56.579	Neolamprologus_brichardi
ENSAPEG00000018582	-	99	86.907	ENSNBRG00000006978	-	72	80.114	Neolamprologus_brichardi
ENSAPEG00000018582	-	100	86.304	ENSONIG00000012268	-	84	87.129	Oreochromis_niloticus
ENSAPEG00000018582	-	99	75.988	ENSORLG00000029243	-	83	76.135	Oryzias_latipes
ENSAPEG00000018582	-	99	75.695	ENSORLG00020017005	-	73	75.842	Oryzias_latipes_hni
ENSAPEG00000018582	-	99	75.403	ENSORLG00015015211	-	73	75.403	Oryzias_latipes_hsok
ENSAPEG00000018582	-	99	76.822	ENSOMEG00000006666	-	72	77.259	Oryzias_melastigma
ENSAPEG00000018582	-	73	59.740	ENSPMGG00000020126	-	58	59.615	Periophthalmus_magnuspinnatus
ENSAPEG00000018582	-	59	93.583	ENSPMGG00000009790	-	69	93.750	Periophthalmus_magnuspinnatus
ENSAPEG00000018582	-	99	84.211	ENSPLAG00000009867	-	73	75.398	Poecilia_latipinna
ENSAPEG00000018582	-	98	47.935	ENSPMEG00000011676	-	71	44.214	Poecilia_mexicana
ENSAPEG00000018582	-	99	84.211	ENSPMEG00000006624	-	73	75.543	Poecilia_mexicana
ENSAPEG00000018582	-	99	82.456	ENSPREG00000010838	-	73	75.687	Poecilia_reticulata
ENSAPEG00000018582	-	99	82.387	ENSSMAG00000007545	-	72	82.387	Scophthalmus_maximus
ENSAPEG00000018582	-	99	49.415	ENSSMAG00000007258	-	71	49.639	Scophthalmus_maximus
ENSAPEG00000018582	-	99	88.136	ENSSDUG00000021864	-	72	82.361	Seriola_dumerili
ENSAPEG00000018582	-	99	53.175	ENSSDUG00000013237	-	86	50.000	Seriola_dumerili
ENSAPEG00000018582	-	99	49.710	ENSSLDG00000004886	-	72	50.000	Seriola_lalandi_dorsalis
ENSAPEG00000018582	-	99	88.136	ENSSLDG00000012268	-	72	81.935	Seriola_lalandi_dorsalis
ENSAPEG00000018582	-	99	46.154	ENSSPAG00000001850	-	72	47.376	Stegastes_partitus
ENSAPEG00000018582	-	99	91.525	ENSSPAG00000009485	-	72	85.571	Stegastes_partitus
ENSAPEG00000018582	-	98	83.333	ENSTRUG00000022519	-	72	77.358	Takifugu_rubripes
ENSAPEG00000018582	-	98	78.188	ENSTNIG00000014519	-	94	78.020	Tetraodon_nigroviridis
ENSAPEG00000018582	-	99	84.211	ENSXMAG00000027171	-	73	75.687	Xiphophorus_maculatus
ENSAPEG00000018582	-	98	46.834	ENSXMAG00000014715	-	56	91.045	Xiphophorus_maculatus