EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000018935 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8609 bases
Position: chr6:17404752-17413360
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000026633	PseudoU_synth_2	PF00849.22	5.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000027345	-	5642	-	ENSAPEP00000026633	401 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000018935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000018935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000018935	rpusd4	80	52.147	ENSG00000165526	RPUSD4	86	51.662	Homo_sapiens
ENSAPEG00000018935	rpusd4	98	95.190	ENSAPOG00000011024	rpusd4	99	95.190	Acanthochromis_polyacanthus
ENSAPEG00000018935	rpusd4	84	52.059	ENSAMEG00000000127	-	88	52.059	Ailuropoda_melanoleuca
ENSAPEG00000018935	rpusd4	56	57.000	ENSAMEG00000005953	-	95	57.000	Ailuropoda_melanoleuca
ENSAPEG00000018935	rpusd4	81	77.160	ENSACIG00000003533	rpusd4	96	77.160	Amphilophus_citrinellus
ENSAPEG00000018935	rpusd4	100	98.753	ENSAOCG00000015409	rpusd4	100	98.753	Amphiprion_ocellaris
ENSAPEG00000018935	rpusd4	98	74.555	ENSATEG00000008059	rpusd4	98	74.555	Anabas_testudineus
ENSAPEG00000018935	rpusd4	70	50.355	ENSAPLG00000013250	RPUSD4	99	49.662	Anas_platyrhynchos
ENSAPEG00000018935	rpusd4	88	47.945	ENSACAG00000000189	RPUSD4	99	47.945	Anolis_carolinensis
ENSAPEG00000018935	rpusd4	83	50.595	ENSANAG00000024050	RPUSD4	89	50.595	Aotus_nancymaae
ENSAPEG00000018935	rpusd4	96	77.143	ENSACLG00000020996	rpusd4	99	77.143	Astatotilapia_calliptera
ENSAPEG00000018935	rpusd4	83	59.763	ENSAMXG00000031479	rpusd4	95	59.763	Astyanax_mexicanus
ENSAPEG00000018935	rpusd4	83	51.642	ENSBTAG00000020900	RPUSD4	87	51.796	Bos_taurus
ENSAPEG00000018935	rpusd4	83	50.882	ENSCJAG00000042850	RPUSD4	84	50.882	Callithrix_jacchus
ENSAPEG00000018935	rpusd4	85	51.445	ENSCAFG00000010488	RPUSD4	88	51.734	Canis_familiaris
ENSAPEG00000018935	rpusd4	85	51.445	ENSCAFG00020010621	RPUSD4	88	51.734	Canis_lupus_dingo
ENSAPEG00000018935	rpusd4	81	52.294	ENSCHIG00000009975	RPUSD4	87	51.488	Capra_hircus
ENSAPEG00000018935	rpusd4	83	52.695	ENSTSYG00000008456	RPUSD4	86	52.695	Carlito_syrichta
ENSAPEG00000018935	rpusd4	61	51.837	ENSCAPG00000006040	RPUSD4	93	51.837	Cavia_aperea
ENSAPEG00000018935	rpusd4	87	51.989	ENSCPOG00000014971	RPUSD4	93	51.989	Cavia_porcellus
ENSAPEG00000018935	rpusd4	81	51.829	ENSCCAG00000027838	RPUSD4	87	51.829	Cebus_capucinus
ENSAPEG00000018935	rpusd4	94	46.982	ENSCATG00000041570	RPUSD4	94	46.982	Cercocebus_atys
ENSAPEG00000018935	rpusd4	83	53.687	ENSCLAG00000016553	RPUSD4	88	53.687	Chinchilla_lanigera
ENSAPEG00000018935	rpusd4	94	48.303	ENSCSAG00000002274	RPUSD4	94	48.303	Chlorocebus_sabaeus
ENSAPEG00000018935	rpusd4	70	53.546	ENSCHOG00000010249	RPUSD4	98	53.546	Choloepus_hoffmanni
ENSAPEG00000018935	rpusd4	71	53.287	ENSCPBG00000011175	RPUSD4	99	53.287	Chrysemys_picta_bellii
ENSAPEG00000018935	rpusd4	79	36.778	ENSCSAVG00000000872	-	63	36.778	Ciona_savignyi
ENSAPEG00000018935	rpusd4	87	49.432	ENSCANG00000039684	RPUSD4	90	49.432	Colobus_angolensis_palliatus
ENSAPEG00000018935	rpusd4	85	50.578	ENSCGRG00001024141	Rpusd4	90	50.578	Cricetulus_griseus_chok1gshd
ENSAPEG00000018935	rpusd4	85	50.578	ENSCGRG00000014415	Rpusd4	90	50.578	Cricetulus_griseus_crigri
ENSAPEG00000018935	rpusd4	97	68.448	ENSCVAG00000000392	rpusd4	98	73.837	Cyprinodon_variegatus
ENSAPEG00000018935	rpusd4	97	68.702	ENSCVAG00000008761	rpusd4	99	68.702	Cyprinodon_variegatus
ENSAPEG00000018935	rpusd4	86	56.000	ENSDARG00000012674	rpusd4	95	56.000	Danio_rerio
ENSAPEG00000018935	rpusd4	85	51.009	ENSDNOG00000020026	RPUSD4	91	51.009	Dasypus_novemcinctus
ENSAPEG00000018935	rpusd4	87	48.876	ENSDORG00000016717	Rpusd4	88	50.000	Dipodomys_ordii
ENSAPEG00000018935	rpusd4	83	51.632	ENSETEG00000013953	RPUSD4	91	50.872	Echinops_telfairi
ENSAPEG00000018935	rpusd4	84	50.877	ENSEASG00005022982	RPUSD4	89	50.877	Equus_asinus_asinus
ENSAPEG00000018935	rpusd4	85	50.581	ENSECAG00000000557	RPUSD4	90	50.581	Equus_caballus
ENSAPEG00000018935	rpusd4	64	56.354	ENSEEUG00000014036	RPUSD4	68	56.354	Erinaceus_europaeus
ENSAPEG00000018935	rpusd4	92	62.730	ENSELUG00000008075	rpusd4	99	62.730	Esox_lucius
ENSAPEG00000018935	rpusd4	81	51.829	ENSFCAG00000029789	RPUSD4	86	51.829	Felis_catus
ENSAPEG00000018935	rpusd4	80	48.615	ENSFALG00000005171	RPUSD4	95	48.615	Ficedula_albicollis
ENSAPEG00000018935	rpusd4	90	50.000	ENSFDAG00000014307	RPUSD4	97	50.000	Fukomys_damarensis
ENSAPEG00000018935	rpusd4	97	72.751	ENSFHEG00000004329	rpusd4	99	72.751	Fundulus_heteroclitus
ENSAPEG00000018935	rpusd4	80	64.907	ENSGMOG00000017726	rpusd4	99	62.952	Gadus_morhua
ENSAPEG00000018935	rpusd4	70	52.837	ENSGALG00000024326	RPUSD4	93	48.640	Gallus_gallus
ENSAPEG00000018935	rpusd4	97	69.289	ENSGAFG00000021559	rpusd4	99	69.289	Gambusia_affinis
ENSAPEG00000018935	rpusd4	84	75.595	ENSGACG00000001657	rpusd4	100	75.595	Gasterosteus_aculeatus
ENSAPEG00000018935	rpusd4	87	49.714	ENSGAGG00000000132	RPUSD4	96	49.714	Gopherus_agassizii
ENSAPEG00000018935	rpusd4	80	52.454	ENSGGOG00000016494	RPUSD4	86	51.964	Gorilla_gorilla
ENSAPEG00000018935	rpusd4	96	76.883	ENSHBUG00000022838	rpusd4	99	76.883	Haplochromis_burtoni
ENSAPEG00000018935	rpusd4	85	51.453	ENSHGLG00000002285	RPUSD4	90	51.453	Heterocephalus_glaber_female
ENSAPEG00000018935	rpusd4	85	51.453	ENSHGLG00100006385	RPUSD4	90	51.453	Heterocephalus_glaber_male
ENSAPEG00000018935	rpusd4	96	70.543	ENSHCOG00000006612	rpusd4	99	70.543	Hippocampus_comes
ENSAPEG00000018935	rpusd4	86	56.160	ENSIPUG00000023879	rusd4	90	56.160	Ictalurus_punctatus
ENSAPEG00000018935	rpusd4	83	53.134	ENSSTOG00000025280	RPUSD4	91	53.134	Ictidomys_tridecemlineatus
ENSAPEG00000018935	rpusd4	82	53.012	ENSJJAG00000018673	Rpusd4	88	53.012	Jaculus_jaculus
ENSAPEG00000018935	rpusd4	97	70.408	ENSKMAG00000021805	rpusd4	100	70.408	Kryptolebias_marmoratus
ENSAPEG00000018935	rpusd4	93	73.028	ENSLBEG00000020394	rpusd4	93	82.121	Labrus_bergylta
ENSAPEG00000018935	rpusd4	80	53.963	ENSLACG00000011028	RPUSD4	90	51.389	Latimeria_chalumnae
ENSAPEG00000018935	rpusd4	85	46.243	ENSLOCG00000003124	rpusd4	92	46.243	Lepisosteus_oculatus
ENSAPEG00000018935	rpusd4	81	51.807	ENSLAFG00000005211	RPUSD4	100	45.085	Loxodonta_africana
ENSAPEG00000018935	rpusd4	94	47.244	ENSMFAG00000039513	RPUSD4	94	47.244	Macaca_fascicularis
ENSAPEG00000018935	rpusd4	94	46.982	ENSMMUG00000007933	RPUSD4	94	46.982	Macaca_mulatta
ENSAPEG00000018935	rpusd4	94	47.244	ENSMNEG00000027414	RPUSD4	94	47.244	Macaca_nemestrina
ENSAPEG00000018935	rpusd4	94	47.244	ENSMLEG00000042461	RPUSD4	94	47.244	Mandrillus_leucophaeus
ENSAPEG00000018935	rpusd4	97	74.555	ENSMAMG00000023839	rpusd4	99	74.555	Mastacembelus_armatus
ENSAPEG00000018935	rpusd4	96	76.883	ENSMZEG00005011999	rpusd4	99	76.883	Maylandia_zebra
ENSAPEG00000018935	rpusd4	69	52.143	ENSMGAG00000000840	RPUSD4	98	48.457	Meleagris_gallopavo
ENSAPEG00000018935	rpusd4	83	50.595	ENSMAUG00000010280	Rpusd4	88	50.595	Mesocricetus_auratus
ENSAPEG00000018935	rpusd4	84	52.353	ENSMICG00000015979	RPUSD4	97	52.454	Microcebus_murinus
ENSAPEG00000018935	rpusd4	85	49.709	ENSMOCG00000000661	Rpusd4	90	49.709	Microtus_ochrogaster
ENSAPEG00000018935	rpusd4	78	80.386	ENSMMOG00000021731	rpusd4	93	80.386	Mola_mola
ENSAPEG00000018935	rpusd4	79	54.688	ENSMODG00000004521	RPUSD4	81	54.688	Monodelphis_domestica
ENSAPEG00000018935	rpusd4	76	82.026	ENSMALG00000005839	rpusd4	97	78.997	Monopterus_albus
ENSAPEG00000018935	rpusd4	83	50.893	MGP_CAROLIEiJ_G0031954	Rpusd4	88	50.893	Mus_caroli
ENSAPEG00000018935	rpusd4	83	51.190	ENSMUSG00000032044	Rpusd4	88	50.737	Mus_musculus
ENSAPEG00000018935	rpusd4	85	50.000	MGP_PahariEiJ_G0014819	Rpusd4	90	50.000	Mus_pahari
ENSAPEG00000018935	rpusd4	83	50.445	MGP_SPRETEiJ_G0033078	Rpusd4	88	50.445	Mus_spretus
ENSAPEG00000018935	rpusd4	84	51.765	ENSMPUG00000006608	RPUSD4	88	51.765	Mustela_putorius_furo
ENSAPEG00000018935	rpusd4	79	53.438	ENSMLUG00000017328	-	83	53.438	Myotis_lucifugus
ENSAPEG00000018935	rpusd4	64	51.938	ENSMLUG00000029348	-	99	51.938	Myotis_lucifugus
ENSAPEG00000018935	rpusd4	85	53.198	ENSNGAG00000020847	Rpusd4	90	53.198	Nannospalax_galili
ENSAPEG00000018935	rpusd4	81	80.495	ENSNBRG00000005207	rpusd4	94	80.495	Neolamprologus_brichardi
ENSAPEG00000018935	rpusd4	83	50.595	ENSNLEG00000007465	RPUSD4	88	50.595	Nomascus_leucogenys
ENSAPEG00000018935	rpusd4	81	53.799	ENSMEUG00000004370	RPUSD4	87	53.799	Notamacropus_eugenii
ENSAPEG00000018935	rpusd4	83	52.802	ENSODEG00000004577	RPUSD4	88	52.802	Octodon_degus
ENSAPEG00000018935	rpusd4	96	77.922	ENSONIG00000018879	rpusd4	99	77.922	Oreochromis_niloticus
ENSAPEG00000018935	rpusd4	73	50.000	ENSOANG00000007247	RPUSD4	95	49.834	Ornithorhynchus_anatinus
ENSAPEG00000018935	rpusd4	83	52.507	ENSOCUG00000017039	RPUSD4	89	52.507	Oryctolagus_cuniculus
ENSAPEG00000018935	rpusd4	96	67.700	ENSORLG00000002750	rpusd4	93	74.041	Oryzias_latipes
ENSAPEG00000018935	rpusd4	90	70.994	ENSORLG00020002044	rpusd4	96	67.784	Oryzias_latipes_hni
ENSAPEG00000018935	rpusd4	92	69.919	ENSORLG00015020034	rpusd4	96	67.092	Oryzias_latipes_hsok
ENSAPEG00000018935	rpusd4	96	70.390	ENSOMEG00000004861	rpusd4	96	70.390	Oryzias_melastigma
ENSAPEG00000018935	rpusd4	81	53.659	ENSOGAG00000008922	RPUSD4	89	52.174	Otolemur_garnettii
ENSAPEG00000018935	rpusd4	81	52.294	ENSOARG00000012238	RPUSD4	87	51.488	Ovis_aries
ENSAPEG00000018935	rpusd4	80	52.147	ENSPPAG00000042883	RPUSD4	80	51.662	Pan_paniscus
ENSAPEG00000018935	rpusd4	81	51.829	ENSPPRG00000003081	RPUSD4	86	51.829	Panthera_pardus
ENSAPEG00000018935	rpusd4	81	51.829	ENSPTIG00000012059	RPUSD4	87	52.903	Panthera_tigris_altaica
ENSAPEG00000018935	rpusd4	80	52.147	ENSPTRG00000004454	RPUSD4	86	51.662	Pan_troglodytes
ENSAPEG00000018935	rpusd4	94	46.982	ENSPANG00000015040	RPUSD4	94	46.982	Papio_anubis
ENSAPEG00000018935	rpusd4	86	58.120	ENSPKIG00000023986	rpusd4	90	58.120	Paramormyrops_kingsleyae
ENSAPEG00000018935	rpusd4	75	53.618	ENSPSIG00000014268	RPUSD4	96	53.618	Pelodiscus_sinensis
ENSAPEG00000018935	rpusd4	83	70.359	ENSPMGG00000002806	rpusd4	93	68.976	Periophthalmus_magnuspinnatus
ENSAPEG00000018935	rpusd4	83	45.133	ENSPEMG00000000278	Rpusd4	88	45.133	Peromyscus_maniculatus_bairdii
ENSAPEG00000018935	rpusd4	75	40.000	ENSPMAG00000008183	rpusd4	95	40.000	Petromyzon_marinus
ENSAPEG00000018935	rpusd4	83	53.274	ENSPCIG00000010212	RPUSD4	91	53.274	Phascolarctos_cinereus
ENSAPEG00000018935	rpusd4	92	70.899	ENSPFOG00000019030	rpusd4	99	70.899	Poecilia_formosa
ENSAPEG00000018935	rpusd4	97	69.367	ENSPLAG00000016848	rpusd4	99	69.367	Poecilia_latipinna
ENSAPEG00000018935	rpusd4	97	68.354	ENSPMEG00000017534	rpusd4	99	68.354	Poecilia_mexicana
ENSAPEG00000018935	rpusd4	93	68.421	ENSPREG00000005689	rpusd4	97	68.421	Poecilia_reticulata
ENSAPEG00000018935	rpusd4	84	50.585	ENSPPYG00000004043	RPUSD4	88	50.585	Pongo_abelii
ENSAPEG00000018935	rpusd4	65	54.217	ENSPCAG00000000753	RPUSD4	70	54.217	Procavia_capensis
ENSAPEG00000018935	rpusd4	81	49.091	ENSPCOG00000020694	RPUSD4	87	49.091	Propithecus_coquereli
ENSAPEG00000018935	rpusd4	84	51.765	ENSPVAG00000000988	RPUSD4	89	51.765	Pteropus_vampyrus
ENSAPEG00000018935	rpusd4	96	76.364	ENSPNYG00000009652	rpusd4	99	76.364	Pundamilia_nyererei
ENSAPEG00000018935	rpusd4	81	60.736	ENSPNAG00000012264	rpusd4	86	60.736	Pygocentrus_nattereri
ENSAPEG00000018935	rpusd4	83	51.039	ENSRNOG00000011567	Rpusd4	88	51.039	Rattus_norvegicus
ENSAPEG00000018935	rpusd4	86	49.568	ENSRBIG00000034842	RPUSD4	90	49.148	Rhinopithecus_bieti
ENSAPEG00000018935	rpusd4	86	49.568	ENSRROG00000039753	RPUSD4	90	49.148	Rhinopithecus_roxellana
ENSAPEG00000018935	rpusd4	83	50.595	ENSSBOG00000030413	RPUSD4	89	50.595	Saimiri_boliviensis_boliviensis
ENSAPEG00000018935	rpusd4	76	54.575	ENSSHAG00000008304	RPUSD4	99	54.575	Sarcophilus_harrisii
ENSAPEG00000018935	rpusd4	81	59.394	ENSSFOG00015006203	rpusd4	89	59.394	Scleropages_formosus
ENSAPEG00000018935	rpusd4	97	72.093	ENSSMAG00000020978	rpusd4	99	72.679	Scophthalmus_maximus
ENSAPEG00000018935	rpusd4	96	76.104	ENSSDUG00000013399	rpusd4	100	76.104	Seriola_dumerili
ENSAPEG00000018935	rpusd4	96	76.364	ENSSLDG00000023507	rpusd4	100	76.364	Seriola_lalandi_dorsalis
ENSAPEG00000018935	rpusd4	74	54.181	ENSSPUG00000001401	RPUSD4	90	51.672	Sphenodon_punctatus
ENSAPEG00000018935	rpusd4	97	83.805	ENSSPAG00000012163	rpusd4	99	83.805	Stegastes_partitus
ENSAPEG00000018935	rpusd4	86	50.578	ENSSSCG00000015233	RPUSD4	89	50.578	Sus_scrofa
ENSAPEG00000018935	rpusd4	75	50.166	ENSTGUG00000000773	RPUSD4	99	50.166	Taeniopygia_guttata
ENSAPEG00000018935	rpusd4	97	67.352	ENSTRUG00000012283	rpusd4	100	67.352	Takifugu_rubripes
ENSAPEG00000018935	rpusd4	95	67.363	ENSTNIG00000014676	rpusd4	98	67.363	Tetraodon_nigroviridis
ENSAPEG00000018935	rpusd4	83	51.613	ENSTTRG00000001555	RPUSD4	88	51.917	Tursiops_truncatus
ENSAPEG00000018935	rpusd4	84	52.059	ENSUMAG00000002219	RPUSD4	88	52.059	Ursus_maritimus
ENSAPEG00000018935	rpusd4	55	49.321	ENSVPAG00000001066	RPUSD4	88	48.945	Vicugna_pacos
ENSAPEG00000018935	rpusd4	85	51.445	ENSVVUG00000020101	RPUSD4	88	51.734	Vulpes_vulpes
ENSAPEG00000018935	rpusd4	97	69.036	ENSXCOG00000004676	rpusd4	99	69.036	Xiphophorus_couchianus
ENSAPEG00000018935	rpusd4	97	68.782	ENSXMAG00000023351	rpusd4	99	68.782	Xiphophorus_maculatus