EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000018964 (Gene tree)
Gene ID: -
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine/arginine repetitive matrix 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 12507 bases
Position: chr18:31812357-31824863
Accession: ZDB-GENE-040426-2789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000026685	PWI	PF01480.17	1.4e-30	1	1
ENSAPEP00000026669	PWI	PF01480.17	1.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000027399	-	5381	-	ENSAPEP00000026685	833 (aa)	-	-
ENSAPET00000027383	-	5468	-	ENSAPEP00000026669	862 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000018964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000018964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000018964	srrm1	100	96.528	ENSAPOG00000001170	srrm1	99	98.718	Acanthochromis_polyacanthus
ENSAPEG00000018964	srrm1	100	99.304	ENSAOCG00000021757	srrm1	100	99.304	Amphiprion_ocellaris
ENSAPEG00000018964	srrm1	60	88.803	ENSATEG00000007659	srrm1	60	88.996	Anabas_testudineus
ENSAPEG00000018964	srrm1	58	50.906	ENSDARG00000001244	srrm1	99	94.872	Danio_rerio
ENSAPEG00000018964	srrm1	60	82.012	ENSGACG00000007266	srrm1	100	70.615	Gasterosteus_aculeatus
ENSAPEG00000018964	srrm1	58	82.200	ENSHBUG00000020364	srrm1	63	78.800	Haplochromis_burtoni
ENSAPEG00000018964	srrm1	87	83.041	ENSLBEG00000013936	srrm1	100	87.254	Labrus_bergylta
ENSAPEG00000018964	srrm1	100	84.028	ENSMAMG00000010305	srrm1	100	84.144	Mastacembelus_armatus
ENSAPEG00000018964	srrm1	58	83.200	ENSONIG00000008206	srrm1	54	79.800	Oreochromis_niloticus
ENSAPEG00000018964	srrm1	100	75.635	ENSORLG00015014743	srrm1	61	80.426	Oryzias_latipes_hsok
ENSAPEG00000018964	srrm1	67	77.465	ENSPKIG00000008252	srrm1	62	76.761	Paramormyrops_kingsleyae
ENSAPEG00000018964	srrm1	68	81.852	ENSPREG00000002652	srrm1	64	86.486	Poecilia_reticulata
ENSAPEG00000018964	srrm1	100	86.690	ENSSDUG00000012967	srrm1	100	86.111	Seriola_dumerili
ENSAPEG00000018964	srrm1	100	84.162	ENSSLDG00000012771	srrm1	100	83.931	Seriola_lalandi_dorsalis
ENSAPEG00000018964	srrm1	100	93.634	ENSSPAG00000009507	srrm1	100	93.634	Stegastes_partitus
ENSAPEG00000018964	srrm1	100	73.184	ENSTRUG00000002519	srrm1	60	81.431	Takifugu_rubripes
ENSAPEG00000018964	srrm1	99	69.731	ENSTNIG00000016909	srrm1	100	75.145	Tetraodon_nigroviridis