EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000019084 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 36454 bases
Position: chr21:3119567-3156020
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000026926	Upf2	PF04050.14	4.4e-33	1	1
ENSAPEP00000026954	Upf2	PF04050.14	6.1e-33	1	1
ENSAPEP00000026954	MIF4G	PF02854.19	1.6e-76	1	3
ENSAPEP00000026954	MIF4G	PF02854.19	1.6e-76	2	3
ENSAPEP00000026954	MIF4G	PF02854.19	1.6e-76	3	3
ENSAPEP00000026926	MIF4G	PF02854.19	1.8e-76	1	3
ENSAPEP00000026926	MIF4G	PF02854.19	1.8e-76	2	3
ENSAPEP00000026926	MIF4G	PF02854.19	1.8e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000027646	UPF2-201	6553	-	ENSAPEP00000026926	1276 (aa)	-	-
ENSAPET00000027674	UPF2-202	3744	-	ENSAPEP00000026954	1247 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000019084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000019084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000019084	UPF2	100	82.619	ENSG00000151461	UPF2	100	82.541	Homo_sapiens
ENSAPEG00000019084	UPF2	100	95.513	ENSAPOG00000015837	UPF2	100	95.513	Acanthochromis_polyacanthus
ENSAPEG00000019084	UPF2	100	83.229	ENSAMEG00000004586	UPF2	100	83.151	Ailuropoda_melanoleuca
ENSAPEG00000019084	UPF2	99	97.257	ENSACIG00000018078	UPF2	100	97.257	Amphilophus_citrinellus
ENSAPEG00000019084	UPF2	100	99.922	ENSAOCG00000016766	UPF2	100	99.922	Amphiprion_ocellaris
ENSAPEG00000019084	UPF2	100	96.635	ENSATEG00000021677	UPF2	99	96.635	Anabas_testudineus
ENSAPEG00000019084	UPF2	100	79.842	ENSAPLG00000010287	UPF2	90	84.939	Anas_platyrhynchos
ENSAPEG00000019084	UPF2	100	82.917	ENSACAG00000009259	UPF2	100	82.917	Anolis_carolinensis
ENSAPEG00000019084	UPF2	91	79.177	ENSANAG00000028451	UPF2	93	79.163	Aotus_nancymaae
ENSAPEG00000019084	UPF2	100	96.714	ENSACLG00000012696	UPF2	100	96.714	Astatotilapia_calliptera
ENSAPEG00000019084	UPF2	99	89.445	ENSAMXG00000013700	UPF2	99	89.367	Astyanax_mexicanus
ENSAPEG00000019084	UPF2	100	83.229	ENSBTAG00000000288	UPF2	100	82.995	Bos_taurus
ENSAPEG00000019084	UPF2	100	82.215	ENSCJAG00000020685	UPF2	100	81.747	Callithrix_jacchus
ENSAPEG00000019084	UPF2	100	83.307	ENSCAFG00000004839	UPF2	100	83.229	Canis_familiaris
ENSAPEG00000019084	UPF2	100	82.283	ENSCAFG00020005882	UPF2	99	86.869	Canis_lupus_dingo
ENSAPEG00000019084	UPF2	100	83.229	ENSCHIG00000020359	UPF2	100	83.151	Capra_hircus
ENSAPEG00000019084	UPF2	100	82.839	ENSTSYG00000000935	UPF2	97	85.955	Carlito_syrichta
ENSAPEG00000019084	UPF2	91	74.936	ENSCAPG00000016658	UPF2	95	74.488	Cavia_aperea
ENSAPEG00000019084	UPF2	99	80.189	ENSCPOG00000008809	UPF2	100	80.110	Cavia_porcellus
ENSAPEG00000019084	UPF2	100	75.975	ENSCCAG00000035991	UPF2	100	75.585	Cebus_capucinus
ENSAPEG00000019084	UPF2	100	82.775	ENSCATG00000032679	UPF2	100	82.697	Cercocebus_atys
ENSAPEG00000019084	UPF2	100	82.201	ENSCLAG00000011434	UPF2	100	82.123	Chinchilla_lanigera
ENSAPEG00000019084	UPF2	100	82.775	ENSCSAG00000013372	UPF2	100	82.697	Chlorocebus_sabaeus
ENSAPEG00000019084	UPF2	79	89.579	ENSCHOG00000000422	UPF2	81	89.579	Choloepus_hoffmanni
ENSAPEG00000019084	UPF2	99	81.690	ENSCPBG00000027823	UPF2	100	81.534	Chrysemys_picta_bellii
ENSAPEG00000019084	UPF2	79	49.265	ENSCSAVG00000007772	-	99	48.814	Ciona_savignyi
ENSAPEG00000019084	UPF2	100	77.262	ENSCANG00000040396	UPF2	100	77.925	Colobus_angolensis_palliatus
ENSAPEG00000019084	UPF2	100	82.761	ENSCGRG00001019347	Upf2	100	82.683	Cricetulus_griseus_chok1gshd
ENSAPEG00000019084	UPF2	100	82.761	ENSCGRG00000017993	Upf2	100	82.683	Cricetulus_griseus_crigri
ENSAPEG00000019084	UPF2	99	88.010	ENSCSEG00000003520	UPF2	99	86.953	Cynoglossus_semilaevis
ENSAPEG00000019084	UPF2	99	94.870	ENSCVAG00000006167	UPF2	100	94.791	Cyprinodon_variegatus
ENSAPEG00000019084	UPF2	100	83.073	ENSDNOG00000018160	UPF2	100	82.995	Dasypus_novemcinctus
ENSAPEG00000019084	UPF2	100	82.527	ENSDORG00000002478	Upf2	100	82.449	Dipodomys_ordii
ENSAPEG00000019084	UPF2	89	36.296	FBgn0029992	Upf2	90	39.610	Drosophila_melanogaster
ENSAPEG00000019084	UPF2	73	92.701	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSAPEG00000019084	UPF2	66	72.185	ENSEBUG00000012448	-	97	68.460	Eptatretus_burgeri
ENSAPEG00000019084	UPF2	100	82.514	ENSEASG00005019274	UPF2	100	82.715	Equus_asinus_asinus
ENSAPEG00000019084	UPF2	100	82.514	ENSECAG00000017022	UPF2	100	82.436	Equus_caballus
ENSAPEG00000019084	UPF2	82	74.528	ENSEEUG00000007819	UPF2	74	75.441	Erinaceus_europaeus
ENSAPEG00000019084	UPF2	99	89.626	ENSELUG00000012014	UPF2	100	90.016	Esox_lucius
ENSAPEG00000019084	UPF2	100	85.792	ENSFCAG00000005785	UPF2	100	83.073	Felis_catus
ENSAPEG00000019084	UPF2	100	84.165	ENSFALG00000001889	UPF2	98	84.087	Ficedula_albicollis
ENSAPEG00000019084	UPF2	100	81.577	ENSFDAG00000014348	UPF2	100	81.421	Fukomys_damarensis
ENSAPEG00000019084	UPF2	99	95.024	ENSFHEG00000009826	UPF2	100	95.024	Fundulus_heteroclitus
ENSAPEG00000019084	UPF2	91	89.551	ENSGMOG00000005557	UPF2	100	87.978	Gadus_morhua
ENSAPEG00000019084	UPF2	100	84.256	ENSGALG00000033772	UPF2	100	83.981	Gallus_gallus
ENSAPEG00000019084	UPF2	100	94.436	ENSGAFG00000020867	UPF2	100	94.436	Gambusia_affinis
ENSAPEG00000019084	UPF2	99	94.058	ENSGACG00000001080	UPF2	100	94.371	Gasterosteus_aculeatus
ENSAPEG00000019084	UPF2	100	82.683	ENSGAGG00000002700	UPF2	100	82.527	Gopherus_agassizii
ENSAPEG00000019084	UPF2	100	82.619	ENSGGOG00000001479	UPF2	100	82.541	Gorilla_gorilla
ENSAPEG00000019084	UPF2	100	96.635	ENSHBUG00000004249	UPF2	100	96.787	Haplochromis_burtoni
ENSAPEG00000019084	UPF2	100	81.811	ENSHGLG00000015176	-	100	81.733	Heterocephalus_glaber_female
ENSAPEG00000019084	UPF2	99	72.791	ENSHGLG00000003822	-	99	72.791	Heterocephalus_glaber_female
ENSAPEG00000019084	UPF2	99	79.437	ENSHGLG00100010036	UPF2	100	77.856	Heterocephalus_glaber_male
ENSAPEG00000019084	UPF2	100	91.881	ENSHCOG00000004025	UPF2	99	91.881	Hippocampus_comes
ENSAPEG00000019084	UPF2	100	88.378	ENSIPUG00000015524	UPF2	100	86.427	Ictalurus_punctatus
ENSAPEG00000019084	UPF2	100	82.839	ENSSTOG00000013075	UPF2	100	82.761	Ictidomys_tridecemlineatus
ENSAPEG00000019084	UPF2	100	79.547	ENSJJAG00000004913	Upf2	100	81.981	Jaculus_jaculus
ENSAPEG00000019084	UPF2	99	94.479	ENSKMAG00000001071	UPF2	100	94.401	Kryptolebias_marmoratus
ENSAPEG00000019084	UPF2	81	93.571	ENSLBEG00000000728	-	94	92.955	Labrus_bergylta
ENSAPEG00000019084	UPF2	100	95.462	ENSLBEG00000016394	-	99	95.540	Labrus_bergylta
ENSAPEG00000019084	UPF2	99	77.336	ENSLACG00000015945	UPF2	100	77.535	Latimeria_chalumnae
ENSAPEG00000019084	UPF2	99	88.425	ENSLOCG00000015698	UPF2	100	88.110	Lepisosteus_oculatus
ENSAPEG00000019084	UPF2	100	82.775	ENSMFAG00000043865	UPF2	100	82.697	Macaca_fascicularis
ENSAPEG00000019084	UPF2	100	82.775	ENSMMUG00000008241	UPF2	100	82.697	Macaca_mulatta
ENSAPEG00000019084	UPF2	81	83.694	ENSMNEG00000008062	UPF2	99	83.595	Macaca_nemestrina
ENSAPEG00000019084	UPF2	100	79.921	ENSMLEG00000036120	UPF2	100	80.250	Mandrillus_leucophaeus
ENSAPEG00000019084	UPF2	100	96.714	ENSMAMG00000018276	UPF2	100	96.714	Mastacembelus_armatus
ENSAPEG00000019084	UPF2	100	96.714	ENSMZEG00005021595	UPF2	100	96.714	Maylandia_zebra
ENSAPEG00000019084	UPF2	99	83.712	ENSMGAG00000004573	UPF2	99	83.438	Meleagris_gallopavo
ENSAPEG00000019084	UPF2	100	80.655	ENSMAUG00000016512	Upf2	100	80.655	Mesocricetus_auratus
ENSAPEG00000019084	UPF2	100	82.123	ENSMICG00000001716	UPF2	99	86.364	Microcebus_murinus
ENSAPEG00000019084	UPF2	100	81.811	ENSMOCG00000008263	Upf2	100	81.889	Microtus_ochrogaster
ENSAPEG00000019084	UPF2	100	93.103	ENSMMOG00000006528	UPF2	100	92.863	Mola_mola
ENSAPEG00000019084	UPF2	100	81.123	ENSMODG00000016794	UPF2	100	83.151	Monodelphis_domestica
ENSAPEG00000019084	UPF2	99	94.427	ENSMALG00000002663	UPF2	100	94.584	Monopterus_albus
ENSAPEG00000019084	UPF2	100	82.527	MGP_CAROLIEiJ_G0023157	Upf2	99	84.796	Mus_caroli
ENSAPEG00000019084	UPF2	100	82.839	ENSMUSG00000043241	Upf2	100	82.839	Mus_musculus
ENSAPEG00000019084	UPF2	100	82.839	MGP_PahariEiJ_G0019217	Upf2	100	83.396	Mus_pahari
ENSAPEG00000019084	UPF2	100	82.995	MGP_SPRETEiJ_G0024075	Upf2	100	83.396	Mus_spretus
ENSAPEG00000019084	UPF2	100	83.151	ENSMPUG00000001064	UPF2	100	83.073	Mustela_putorius_furo
ENSAPEG00000019084	UPF2	99	82.449	ENSMLUG00000000228	UPF2	100	82.477	Myotis_lucifugus
ENSAPEG00000019084	UPF2	100	96.792	ENSNBRG00000013629	UPF2	100	96.792	Neolamprologus_brichardi
ENSAPEG00000019084	UPF2	100	82.697	ENSNLEG00000012058	UPF2	100	82.619	Nomascus_leucogenys
ENSAPEG00000019084	UPF2	72	94.366	ENSOPRG00000006801	-	73	94.366	Ochotona_princeps
ENSAPEG00000019084	UPF2	100	81.811	ENSODEG00000001290	UPF2	100	81.698	Octodon_degus
ENSAPEG00000019084	UPF2	100	96.401	ENSONIG00000017991	UPF2	100	96.401	Oreochromis_niloticus
ENSAPEG00000019084	UPF2	99	81.868	ENSOCUG00000006230	UPF2	100	80.778	Oryctolagus_cuniculus
ENSAPEG00000019084	UPF2	100	93.344	ENSORLG00000017189	UPF2	100	93.579	Oryzias_latipes
ENSAPEG00000019084	UPF2	100	93.422	ENSORLG00020005969	UPF2	100	93.657	Oryzias_latipes_hni
ENSAPEG00000019084	UPF2	100	93.422	ENSORLG00015005713	UPF2	100	93.657	Oryzias_latipes_hsok
ENSAPEG00000019084	UPF2	99	90.424	ENSOMEG00000023420	UPF2	98	90.424	Oryzias_melastigma
ENSAPEG00000019084	UPF2	100	83.229	ENSOGAG00000005796	UPF2	100	82.761	Otolemur_garnettii
ENSAPEG00000019084	UPF2	100	83.100	ENSOARG00000014587	UPF2	100	83.022	Ovis_aries
ENSAPEG00000019084	UPF2	100	79.291	ENSPPAG00000037953	UPF2	100	79.625	Pan_paniscus
ENSAPEG00000019084	UPF2	100	83.151	ENSPPRG00000000690	UPF2	100	83.073	Panthera_pardus
ENSAPEG00000019084	UPF2	100	83.151	ENSPTIG00000008867	UPF2	100	83.073	Panthera_tigris_altaica
ENSAPEG00000019084	UPF2	100	82.619	ENSPTRG00000002291	UPF2	100	82.541	Pan_troglodytes
ENSAPEG00000019084	UPF2	100	82.775	ENSPANG00000023399	UPF2	100	82.697	Papio_anubis
ENSAPEG00000019084	UPF2	100	88.447	ENSPKIG00000025502	UPF2	100	85.792	Paramormyrops_kingsleyae
ENSAPEG00000019084	UPF2	60	81.950	ENSPSIG00000015158	UPF2	95	81.818	Pelodiscus_sinensis
ENSAPEG00000019084	UPF2	99	90.895	ENSPMGG00000005259	UPF2	100	90.895	Periophthalmus_magnuspinnatus
ENSAPEG00000019084	UPF2	93	76.369	ENSPEMG00000015731	Upf2	99	76.369	Peromyscus_maniculatus_bairdii
ENSAPEG00000019084	UPF2	100	83.073	ENSPCIG00000006656	UPF2	100	82.957	Phascolarctos_cinereus
ENSAPEG00000019084	UPF2	100	94.671	ENSPFOG00000017118	UPF2	100	94.671	Poecilia_formosa
ENSAPEG00000019084	UPF2	100	94.749	ENSPLAG00000005094	UPF2	100	94.749	Poecilia_latipinna
ENSAPEG00000019084	UPF2	100	94.671	ENSPMEG00000017009	UPF2	100	94.671	Poecilia_mexicana
ENSAPEG00000019084	UPF2	99	93.564	ENSPREG00000021880	UPF2	100	93.407	Poecilia_reticulata
ENSAPEG00000019084	UPF2	66	85.172	ENSPPYG00000002089	-	100	85.172	Pongo_abelii
ENSAPEG00000019084	UPF2	100	70.749	ENSPCAG00000000684	UPF2	100	70.671	Procavia_capensis
ENSAPEG00000019084	UPF2	100	81.484	ENSPCOG00000021656	UPF2	100	81.245	Propithecus_coquereli
ENSAPEG00000019084	UPF2	100	76.383	ENSPVAG00000017286	UPF2	100	76.306	Pteropus_vampyrus
ENSAPEG00000019084	UPF2	99	94.201	ENSPNYG00000017096	UPF2	100	94.201	Pundamilia_nyererei
ENSAPEG00000019084	UPF2	100	89.548	ENSPNAG00000009357	UPF2	100	89.860	Pygocentrus_nattereri
ENSAPEG00000019084	UPF2	99	78.694	ENSRNOG00000023593	Upf2	100	94.444	Rattus_norvegicus
ENSAPEG00000019084	UPF2	99	81.484	ENSRBIG00000037780	UPF2	100	81.406	Rhinopithecus_bieti
ENSAPEG00000019084	UPF2	100	82.463	ENSRROG00000043547	UPF2	100	82.385	Rhinopithecus_roxellana
ENSAPEG00000019084	UPF2	100	82.059	ENSSBOG00000020012	UPF2	100	81.513	Saimiri_boliviensis_boliviensis
ENSAPEG00000019084	UPF2	100	87.276	ENSSFOG00015023788	upf2	100	87.276	Scleropages_formosus
ENSAPEG00000019084	UPF2	90	93.229	ENSSMAG00000007637	UPF2	100	93.079	Scophthalmus_maximus
ENSAPEG00000019084	UPF2	100	97.571	ENSSDUG00000017244	UPF2	99	97.571	Seriola_dumerili
ENSAPEG00000019084	UPF2	100	96.234	ENSSLDG00000016866	UPF2	100	96.234	Seriola_lalandi_dorsalis
ENSAPEG00000019084	UPF2	100	81.825	ENSSARG00000008615	UPF2	100	81.903	Sorex_araneus
ENSAPEG00000019084	UPF2	100	80.494	ENSSPUG00000014544	UPF2	99	80.685	Sphenodon_punctatus
ENSAPEG00000019084	UPF2	68	84.994	ENSSSCG00000011117	-	99	85.029	Sus_scrofa
ENSAPEG00000019084	UPF2	99	83.894	ENSTGUG00000002163	-	100	83.815	Taeniopygia_guttata
ENSAPEG00000019084	UPF2	100	93.427	ENSTRUG00000007519	UPF2	99	93.584	Takifugu_rubripes
ENSAPEG00000019084	UPF2	100	89.766	ENSTNIG00000004453	UPF2	100	89.453	Tetraodon_nigroviridis
ENSAPEG00000019084	UPF2	93	74.391	ENSTBEG00000012679	UPF2	93	75.063	Tupaia_belangeri
ENSAPEG00000019084	UPF2	100	82.045	ENSTTRG00000016388	UPF2	100	81.967	Tursiops_truncatus
ENSAPEG00000019084	UPF2	88	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSAPEG00000019084	UPF2	100	83.229	ENSUMAG00000012953	UPF2	95	83.151	Ursus_maritimus
ENSAPEG00000019084	UPF2	84	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSAPEG00000019084	UPF2	100	83.307	ENSVVUG00000006166	UPF2	100	83.229	Vulpes_vulpes
ENSAPEG00000019084	UPF2	100	78.907	ENSXETG00000033103	UPF2	91	84.596	Xenopus_tropicalis
ENSAPEG00000019084	UPF2	99	94.505	ENSXCOG00000011604	UPF2	100	94.505	Xiphophorus_couchianus
ENSAPEG00000019084	UPF2	100	94.671	ENSXMAG00000017209	UPF2	100	94.671	Xiphophorus_maculatus