EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000019132 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Minus strand
Length
46480 bases
Position
chr15:12575254-12621733
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000026917tRNA_anti-codonPF01336.253.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000027637RPA1 (1 of many)-2013344-ENSAPEP00000026917664 (aa)--
Gene Model
Click here to download ENSAPEG00000019132's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000019132's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000019132RPA19957.360ENSAPEG00000008634rpa19370.938
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000019132RPA18370.938ENSAPOG00000011658rpa19370.938Acanthochromis_polyacanthus
ENSAPEG00000019132RPA110089.914ENSAPOG00000019409RPA110089.914Acanthochromis_polyacanthus
ENSAPEG00000019132RPA19754.419ENSAMEG00000007706RPA19654.109Ailuropoda_melanoleuca
ENSAPEG00000019132RPA19677.429ENSACIG00000012881RPA19977.273Amphilophus_citrinellus
ENSAPEG00000019132RPA19651.487ENSACIG00000007277rpa17561.556Amphilophus_citrinellus
ENSAPEG00000019132RPA110096.687ENSAOCG00000009003RPA110096.687Amphiprion_ocellaris
ENSAPEG00000019132RPA19957.815ENSAOCG00000023376rpa19370.872Amphiprion_ocellaris
ENSAPEG00000019132RPA18070.522ENSATEG00000022024rpa19470.522Anabas_testudineus
ENSAPEG00000019132RPA110080.572ENSATEG00000006443RPA110079.819Anabas_testudineus
ENSAPEG00000019132RPA19053.714ENSAPLG00000012442RPA110047.397Anas_platyrhynchos
ENSAPEG00000019132RPA18659.565ENSACAG00000014490RPA19759.783Anolis_carolinensis
ENSAPEG00000019132RPA19755.659ENSANAG00000023456RPA19861.783Aotus_nancymaae
ENSAPEG00000019132RPA19979.487ENSACLG00000005223RPA19979.638Astatotilapia_calliptera
ENSAPEG00000019132RPA16672.311ENSACLG00000006640rpa19372.311Astatotilapia_calliptera
ENSAPEG00000019132RPA110058.584ENSAMXG00000008418rpa19970.721Astyanax_mexicanus
ENSAPEG00000019132RPA19953.394ENSBTAG00000009711RPA19953.394Bos_taurus
ENSAPEG00000019132RPA17230.372WBGene00017546rpa-17330.372Caenorhabditis_elegans
ENSAPEG00000019132RPA19753.870ENSCJAG00000001848RPA19953.673Callithrix_jacchus
ENSAPEG00000019132RPA19953.474ENSCAFG00000019249RPA19953.172Canis_familiaris
ENSAPEG00000019132RPA19953.474ENSCAFG00020009847RPA19953.172Canis_lupus_dingo
ENSAPEG00000019132RPA19952.402ENSCHIG00000026308RPA19952.941Capra_hircus
ENSAPEG00000019132RPA19953.453ENSTSYG00000003482-9953.153Carlito_syrichta
ENSAPEG00000019132RPA19953.303ENSCPOG00000000035RPA19953.003Cavia_porcellus
ENSAPEG00000019132RPA110042.962ENSCCAG00000010981RPA19945.427Cebus_capucinus
ENSAPEG00000019132RPA19950.376ENSCLAG00000015045-9949.774Chinchilla_lanigera
ENSAPEG00000019132RPA19953.303ENSCLAG00000005185-9952.402Chinchilla_lanigera
ENSAPEG00000019132RPA18452.941ENSCSAG00000013833RPA19052.941Chlorocebus_sabaeus
ENSAPEG00000019132RPA19653.750ENSCHOG00000013540-9953.344Choloepus_hoffmanni
ENSAPEG00000019132RPA16564.679ENSCHOG00000009454-9964.679Choloepus_hoffmanni
ENSAPEG00000019132RPA19953.684ENSCPBG00000020377RPA19954.106Chrysemys_picta_bellii
ENSAPEG00000019132RPA19941.467ENSCING00000023482-9941.467Ciona_intestinalis
ENSAPEG00000019132RPA18464.027ENSCANG00000030911RPA19464.027Colobus_angolensis_palliatus
ENSAPEG00000019132RPA19953.939ENSCGRG00001008197Rpa19953.182Cricetulus_griseus_chok1gshd
ENSAPEG00000019132RPA17557.654ENSCGRG00000000582Rpa19857.654Cricetulus_griseus_crigri
ENSAPEG00000019132RPA19957.121ENSCSEG00000013066rpa19268.233Cynoglossus_semilaevis
ENSAPEG00000019132RPA110065.964ENSCSEG00000012726RPA19966.290Cynoglossus_semilaevis
ENSAPEG00000019132RPA19455.878ENSCVAG00000019431rpa19957.879Cyprinodon_variegatus
ENSAPEG00000019132RPA19676.462ENSCVAG00000013446-9676.462Cyprinodon_variegatus
ENSAPEG00000019132RPA110058.584ENSDARG00000003938rpa19958.886Danio_rerio
ENSAPEG00000019132RPA19754.884ENSDNOG00000017218RPA19654.193Dasypus_novemcinctus
ENSAPEG00000019132RPA19954.655ENSDORG00000006199Rpa19953.904Dipodomys_ordii
ENSAPEG00000019132RPA18543.023FBgn0010173RpA-709243.953Drosophila_melanogaster
ENSAPEG00000019132RPA18462.887ENSETEG00000017608RPA18262.887Echinops_telfairi
ENSAPEG00000019132RPA19753.333ENSEASG00005009372RPA19963.864Equus_asinus_asinus
ENSAPEG00000019132RPA19954.079ENSECAG00000023886RPA19953.625Equus_caballus
ENSAPEG00000019132RPA16363.962ENSEEUG00000002186-6863.962Erinaceus_europaeus
ENSAPEG00000019132RPA16372.902ENSELUG00000006136RPA19472.902Esox_lucius
ENSAPEG00000019132RPA110056.992ENSELUG00000021071rpa19956.992Esox_lucius
ENSAPEG00000019132RPA19954.230ENSFCAG00000006306RPA19953.243Felis_catus
ENSAPEG00000019132RPA19952.474ENSFALG00000006575RPA19952.083Ficedula_albicollis
ENSAPEG00000019132RPA19953.604ENSFDAG00000007720RPA19952.853Fukomys_damarensis
ENSAPEG00000019132RPA19957.251ENSFHEG00000003580rpa19667.672Fundulus_heteroclitus
ENSAPEG00000019132RPA18868.864ENSGMOG00000010382rpa19868.864Gadus_morhua
ENSAPEG00000019132RPA19953.513ENSGALG00000003072RPA19952.915Gallus_gallus
ENSAPEG00000019132RPA19978.431ENSGAFG00000020953RPA19978.431Gambusia_affinis
ENSAPEG00000019132RPA19957.315ENSGAFG00000012916rpa19170.387Gambusia_affinis
ENSAPEG00000019132RPA19955.758ENSGACG00000010856rpa19270.670Gasterosteus_aculeatus
ENSAPEG00000019132RPA19953.684ENSGAGG00000013611RPA19953.534Gopherus_agassizii
ENSAPEG00000019132RPA18964.172ENSGGOG00000014186RPA19664.172Gorilla_gorilla
ENSAPEG00000019132RPA19958.182ENSHBUG00000017773rpa19958.157Haplochromis_burtoni
ENSAPEG00000019132RPA18378.723ENSHBUG00000009348RPA19878.723Haplochromis_burtoni
ENSAPEG00000019132RPA19064.155ENSHGLG00000008846RPA110052.924Heterocephalus_glaber_female
ENSAPEG00000019132RPA19949.399ENSHGLG00100000799-9949.249Heterocephalus_glaber_male
ENSAPEG00000019132RPA19064.155ENSHGLG00100017755-10052.924Heterocephalus_glaber_male
ENSAPEG00000019132RPA18458.897ENSHGLG00100002005-9647.512Heterocephalus_glaber_male
ENSAPEG00000019132RPA19953.191ENSHCOG00000001401rpa19953.566Hippocampus_comes
ENSAPEG00000019132RPA19153.780ENSHCOG00000000351RPA19953.780Hippocampus_comes
ENSAPEG00000019132RPA110059.187ENSIPUG00000004400rpa19959.187Ictalurus_punctatus
ENSAPEG00000019132RPA19751.310ENSSTOG00000022475RPA19950.539Ictidomys_tridecemlineatus
ENSAPEG00000019132RPA19654.517ENSJJAG00000000876Rpa19854.206Jaculus_jaculus
ENSAPEG00000019132RPA19957.640ENSKMAG00000005605rpa19957.640Kryptolebias_marmoratus
ENSAPEG00000019132RPA19973.042ENSKMAG00000000234RPA19973.042Kryptolebias_marmoratus
ENSAPEG00000019132RPA19972.370ENSLBEG00000002281RPA19971.955Labrus_bergylta
ENSAPEG00000019132RPA18868.326ENSLBEG00000021604rpa19668.326Labrus_bergylta
ENSAPEG00000019132RPA17058.422ENSLACG00000007210RPA19558.422Latimeria_chalumnae
ENSAPEG00000019132RPA110057.057ENSLOCG00000006397rpa19957.057Lepisosteus_oculatus
ENSAPEG00000019132RPA19754.814ENSLAFG00000015354RPA19952.276Loxodonta_africana
ENSAPEG00000019132RPA16664.826ENSMFAG00000036138-8764.826Macaca_fascicularis
ENSAPEG00000019132RPA110049.475ENSMMUG00000002442-9259.955Macaca_mulatta
ENSAPEG00000019132RPA18163.801ENSMMUG00000011604-9853.941Macaca_mulatta
ENSAPEG00000019132RPA18559.459ENSMNEG00000029837-9959.459Macaca_nemestrina
ENSAPEG00000019132RPA18063.122ENSMNEG00000031632-9853.499Macaca_nemestrina
ENSAPEG00000019132RPA18161.312ENSMLEG00000038768-8961.312Mandrillus_leucophaeus
ENSAPEG00000019132RPA19979.495ENSMAMG00000020097RPA19979.792Mastacembelus_armatus
ENSAPEG00000019132RPA19957.727ENSMAMG00000017993rpa19769.128Mastacembelus_armatus
ENSAPEG00000019132RPA19958.030ENSMZEG00005007551rpa18871.734Maylandia_zebra
ENSAPEG00000019132RPA19979.487ENSMZEG00005024731RPA19979.638Maylandia_zebra
ENSAPEG00000019132RPA19953.030ENSMGAG00000005315RPA19852.719Meleagris_gallopavo
ENSAPEG00000019132RPA19654.277ENSMAUG00000010474Rpa19854.673Mesocricetus_auratus
ENSAPEG00000019132RPA19954.669ENSMICG00000012867RPA19954.217Microcebus_murinus
ENSAPEG00000019132RPA19952.711ENSMOCG00000013019Rpa19952.782Microtus_ochrogaster
ENSAPEG00000019132RPA19756.542ENSMMOG00000014292rpa19957.788Mola_mola
ENSAPEG00000019132RPA19871.713ENSMMOG00000010868RPA19882.569Mola_mola
ENSAPEG00000019132RPA110054.042ENSMODG00000010549RPA19953.823Monodelphis_domestica
ENSAPEG00000019132RPA110073.992ENSMALG00000001208RPA110073.435Monopterus_albus
ENSAPEG00000019132RPA19957.686ENSMALG00000011453rpa19957.230Monopterus_albus
ENSAPEG00000019132RPA19953.788MGP_CAROLIEiJ_G0016734Rpa19953.788Mus_caroli
ENSAPEG00000019132RPA19953.636ENSMUSG00000000751Rpa19953.636Mus_musculus
ENSAPEG00000019132RPA19953.939MGP_PahariEiJ_G0017871Rpa19953.939Mus_pahari
ENSAPEG00000019132RPA19953.858MGP_SPRETEiJ_G0017577Rpa19953.858Mus_spretus
ENSAPEG00000019132RPA19953.172ENSMPUG00000013119RPA19952.870Mustela_putorius_furo
ENSAPEG00000019132RPA19754.419ENSMLUG00000006113RPA19554.264Myotis_lucifugus
ENSAPEG00000019132RPA19654.304ENSNGAG00000004522Rpa19454.147Nannospalax_galili
ENSAPEG00000019132RPA16671.854ENSNBRG00000020595rpa19271.854Neolamprologus_brichardi
ENSAPEG00000019132RPA19870.365ENSNBRG00000009672RPA19770.213Neolamprologus_brichardi
ENSAPEG00000019132RPA18463.946ENSNLEG00000017149RPA19163.946Nomascus_leucogenys
ENSAPEG00000019132RPA18860.825ENSMEUG00000006714RPA18860.825Notamacropus_eugenii
ENSAPEG00000019132RPA19653.906ENSODEG00000009038RPA19653.906Octodon_degus
ENSAPEG00000019132RPA19957.640ENSONIG00000013135rpa19957.617Oreochromis_niloticus
ENSAPEG00000019132RPA19754.025ENSOANG00000010880RPA19853.941Ornithorhynchus_anatinus
ENSAPEG00000019132RPA19952.047ENSOCUG00000001504RPA19951.387Oryctolagus_cuniculus
ENSAPEG00000019132RPA19975.486ENSORLG00000003368RPA19975.486Oryzias_latipes
ENSAPEG00000019132RPA19957.511ENSORLG00000004856rpa19957.208Oryzias_latipes
ENSAPEG00000019132RPA19975.632ENSORLG00020015284RPA19975.632Oryzias_latipes_hni
ENSAPEG00000019132RPA19957.511ENSORLG00020008980rpa19957.208Oryzias_latipes_hni
ENSAPEG00000019132RPA19957.511ENSORLG00015013982rpa19957.208Oryzias_latipes_hsok
ENSAPEG00000019132RPA19974.737ENSORLG00015020383RPA19974.737Oryzias_latipes_hsok
ENSAPEG00000019132RPA16681.922ENSORLG00015005867-9981.922Oryzias_latipes_hsok
ENSAPEG00000019132RPA19956.601ENSOMEG00000004704rpa19664.786Oryzias_melastigma
ENSAPEG00000019132RPA19672.057ENSOMEG00000011040RPA19871.384Oryzias_melastigma
ENSAPEG00000019132RPA18265.000ENSOGAG00000029379-9965.000Otolemur_garnettii
ENSAPEG00000019132RPA19954.054ENSOGAG00000005581-9954.192Otolemur_garnettii
ENSAPEG00000019132RPA19952.252ENSOARG00000014479RPA19952.790Ovis_aries
ENSAPEG00000019132RPA19953.754ENSPPAG00000039680RPA19953.904Pan_paniscus
ENSAPEG00000019132RPA19954.204ENSPPRG00000011807RPA19953.373Panthera_pardus
ENSAPEG00000019132RPA19954.230ENSPTIG00000007898RPA19953.394Panthera_tigris_altaica
ENSAPEG00000019132RPA18464.172ENSPTRG00000008539RPA19953.754Pan_troglodytes
ENSAPEG00000019132RPA18463.801ENSPANG00000024592RPA19953.214Papio_anubis
ENSAPEG00000019132RPA19555.450ENSPKIG00000008053rpa19459.213Paramormyrops_kingsleyae
ENSAPEG00000019132RPA19754.334ENSPSIG00000015617RPA18965.227Pelodiscus_sinensis
ENSAPEG00000019132RPA18269.866ENSPMGG00000011589rpa19669.866Periophthalmus_magnuspinnatus
ENSAPEG00000019132RPA110065.476ENSPMGG00000000543RPA19968.336Periophthalmus_magnuspinnatus
ENSAPEG00000019132RPA19953.182ENSPEMG00000021061Rpa19953.030Peromyscus_maniculatus_bairdii
ENSAPEG00000019132RPA18465.079ENSPCIG00000019049RPA19953.823Phascolarctos_cinereus
ENSAPEG00000019132RPA19957.768ENSPFOG00000003987rpa19957.768Poecilia_formosa
ENSAPEG00000019132RPA19957.919ENSPLAG00000004984rpa19957.919Poecilia_latipinna
ENSAPEG00000019132RPA19577.971ENSPLAG00000008844-9777.971Poecilia_latipinna
ENSAPEG00000019132RPA19578.288ENSPMEG00000003627-9778.288Poecilia_mexicana
ENSAPEG00000019132RPA19957.466ENSPMEG00000020602rpa19369.977Poecilia_mexicana
ENSAPEG00000019132RPA18262.264ENSPREG00000010174rpa19362.264Poecilia_reticulata
ENSAPEG00000019132RPA19975.988ENSPREG00000010119RPA110075.460Poecilia_reticulata
ENSAPEG00000019132RPA19954.367ENSPCOG00000001799RPA19953.916Propithecus_coquereli
ENSAPEG00000019132RPA19953.904ENSPVAG00000002149RPA19952.853Pteropus_vampyrus
ENSAPEG00000019132RPA19979.186ENSPNYG00000024165RPA19979.336Pundamilia_nyererei
ENSAPEG00000019132RPA19958.182ENSPNYG00000016316rpa19372.311Pundamilia_nyererei
ENSAPEG00000019132RPA19551.969ENSPNAG00000008599rpa19951.719Pygocentrus_nattereri
ENSAPEG00000019132RPA19953.636ENSRNOG00000003123Rpa19953.485Rattus_norvegicus
ENSAPEG00000019132RPA110053.812ENSRBIG00000036587RPA19163.575Rhinopithecus_bieti
ENSAPEG00000019132RPA110050.673ENSRROG00000043278RPA19158.824Rhinopithecus_roxellana
ENSAPEG00000019132RPA19252.472ENSSBOG00000030233RPA19754.412Saimiri_boliviensis_boliviensis
ENSAPEG00000019132RPA18265.760ENSSHAG00000007969RPA19854.780Sarcophilus_harrisii
ENSAPEG00000019132RPA110060.150ENSSFOG00015005362rpa19259.098Scleropages_formosus
ENSAPEG00000019132RPA110079.073ENSSMAG00000019746RPA110079.217Scophthalmus_maximus
ENSAPEG00000019132RPA110080.294ENSSDUG00000016358RPA110080.441Seriola_dumerili
ENSAPEG00000019132RPA18770.721ENSSDUG00000011949rpa19670.721Seriola_dumerili
ENSAPEG00000019132RPA18970.495ENSSLDG00000011806rpa19670.495Seriola_lalandi_dorsalis
ENSAPEG00000019132RPA110079.270ENSSLDG00000020784RPA110079.708Seriola_lalandi_dorsalis
ENSAPEG00000019132RPA18250.091ENSSARG00000007506RPA18249.726Sorex_araneus
ENSAPEG00000019132RPA19556.627ENSSPUG00000007223RPA19856.627Sphenodon_punctatus
ENSAPEG00000019132RPA19957.727ENSSPAG00000009903rpa19957.121Stegastes_partitus
ENSAPEG00000019132RPA19978.015ENSSPAG00000011165RPA110076.355Stegastes_partitus
ENSAPEG00000019132RPA19754.489ENSSSCG00000017822RPA19960.970Sus_scrofa
ENSAPEG00000019132RPA19952.331ENSTGUG00000005775RPA19952.252Taeniopygia_guttata
ENSAPEG00000019132RPA19956.297ENSTRUG00000003616rpa19268.864Takifugu_rubripes
ENSAPEG00000019132RPA19967.818ENSTRUG00000000405RPA19968.163Takifugu_rubripes
ENSAPEG00000019132RPA19957.508ENSTNIG00000016199rpa19957.530Tetraodon_nigroviridis
ENSAPEG00000019132RPA16664.773ENSTBEG00000002709RPA17464.773Tupaia_belangeri
ENSAPEG00000019132RPA19953.012ENSTTRG00000001169RPA19953.243Tursiops_truncatus
ENSAPEG00000019132RPA17675.000ENSUAMG00000015676RPA19175.000Ursus_americanus
ENSAPEG00000019132RPA18763.864ENSUMAG00000009328RPA19563.864Ursus_maritimus
ENSAPEG00000019132RPA19952.200ENSVPAG00000009443RPA19951.515Vicugna_pacos
ENSAPEG00000019132RPA19953.092ENSVVUG00000021715RPA19953.233Vulpes_vulpes
ENSAPEG00000019132RPA18465.837ENSXETG00000013538rpa19954.532Xenopus_tropicalis
ENSAPEG00000019132RPA19671.339ENSXCOG00000009899-9969.921Xiphophorus_couchianus
ENSAPEG00000019132RPA17970.098ENSXCOG00000010068rpa18970.098Xiphophorus_couchianus
ENSAPEG00000019132RPA19957.315ENSXMAG00000004102rpa19469.161Xiphophorus_maculatus
ENSAPEG00000019132RPA19974.011ENSXMAG00000010333RPA19973.870Xiphophorus_maculatus

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