EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000019526 (Gene tree)
Gene ID
-
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
12288 bases
Position
chr11:29743362-29755649
Accession
ZDB-GENE-030131-3275
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000027502CPSF73-100_CPF11718.86.3e-5311
ENSAPEP00000027543CPSF73-100_CPF11718.81.4e-4811
ENSAPEP00000027521CPSF73-100_CPF11718.84.1e-4511
ENSAPEP00000027543Beta-CaspPF10996.87.5e-3411
ENSAPEP00000027502Beta-CaspPF10996.88.9e-3411
ENSAPEP00000027521Beta-CaspPF10996.89e-3411
ENSAPEP00000027521Lactamase_BPF00753.271.9e-1811
ENSAPEP00000027502Lactamase_BPF00753.272e-1811
ENSAPEP00000027543Lactamase_BPF00753.275e-0811
ENSAPEP00000027543RMMBLPF07521.121.6e-2111
ENSAPEP00000027521RMMBLPF07521.121.8e-2111
ENSAPEP00000027502RMMBLPF07521.121.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000028254-2734-ENSAPEP00000027521664 (aa)--
ENSAPET00000028276-1869-ENSAPEP00000027543622 (aa)--
ENSAPET00000028234-2205-ENSAPEP00000027502686 (aa)--
Gene Model
Click here to download ENSAPEG00000019526's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000019526's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000019526cpsf39989.362ENSAPEG00000021167CPSF310087.971
ENSAPEG00000019526cpsf36939.030ENSAPEG00000024732ints117839.030
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000019526cpsf39786.728ENSG00000119203CPSF310098.529Homo_sapiens
ENSAPEG00000019526cpsf37796.457ENSAPOG00000012241CPSF39196.457Acanthochromis_polyacanthus
ENSAPEG00000019526cpsf310099.125ENSAPOG00000022087cpsf310099.125Acanthochromis_polyacanthus
ENSAPEG00000019526cpsf39786.728ENSAMEG00000008493CPSF39985.567Ailuropoda_melanoleuca
ENSAPEG00000019526cpsf39986.299ENSACIG00000023663CPSF39986.299Amphilophus_citrinellus
ENSAPEG00000019526cpsf310091.930ENSACIG00000009846cpsf310091.930Amphilophus_citrinellus
ENSAPEG00000019526cpsf39989.210ENSAOCG00000010077CPSF310087.971Amphiprion_ocellaris
ENSAPEG00000019526cpsf310099.854ENSAOCG00000022056cpsf310099.854Amphiprion_ocellaris
ENSAPEG00000019526cpsf39995.738ENSATEG00000003959cpsf39995.468Anabas_testudineus
ENSAPEG00000019526cpsf39985.236ENSATEG00000014525CPSF39984.448Anabas_testudineus
ENSAPEG00000019526cpsf39686.698ENSAPLG00000006941CPSF39885.522Anas_platyrhynchos
ENSAPEG00000019526cpsf39980.763ENSACAG00000001759CPSF39983.123Anolis_carolinensis
ENSAPEG00000019526cpsf39880.560ENSANAG00000031254CPSF39980.931Aotus_nancymaae
ENSAPEG00000019526cpsf310093.291ENSACLG00000014484cpsf39995.770Astatotilapia_calliptera
ENSAPEG00000019526cpsf39986.142ENSACLG00000018846CPSF39986.328Astatotilapia_calliptera
ENSAPEG00000019526cpsf39989.041ENSAMXG00000004786cpsf39987.500Astyanax_mexicanus
ENSAPEG00000019526cpsf39786.728ENSBTAG00000019735CPSF39985.567Bos_taurus
ENSAPEG00000019526cpsf39357.098WBGene00013460cpsf-39753.680Caenorhabditis_elegans
ENSAPEG00000019526cpsf39786.574ENSCJAG00000006276CPSF39985.420Callithrix_jacchus
ENSAPEG00000019526cpsf39786.728ENSCAFG00000003375CPSF39585.567Canis_familiaris
ENSAPEG00000019526cpsf39388.169ENSCAFG00020026799CPSF39988.312Canis_lupus_dingo
ENSAPEG00000019526cpsf39786.728ENSCHIG00000013973CPSF39985.567Capra_hircus
ENSAPEG00000019526cpsf39786.728ENSTSYG00000002967CPSF39985.567Carlito_syrichta
ENSAPEG00000019526cpsf39982.962ENSCAPG00000013851CPSF39985.865Cavia_aperea
ENSAPEG00000019526cpsf39886.009ENSCPOG00000011299CPSF39986.009Cavia_porcellus
ENSAPEG00000019526cpsf39786.574ENSCCAG00000036730CPSF39985.420Cebus_capucinus
ENSAPEG00000019526cpsf39784.877ENSCATG00000014770CPSF39991.349Cercocebus_atys
ENSAPEG00000019526cpsf39886.009ENSCLAG00000002727CPSF39986.009Chinchilla_lanigera
ENSAPEG00000019526cpsf39877.614ENSCSAG00000007125CPSF39977.614Chlorocebus_sabaeus
ENSAPEG00000019526cpsf385100.000ENSCHOG00000000180CPSF38561.620Choloepus_hoffmanni
ENSAPEG00000019526cpsf39986.212ENSCPBG00000014074CPSF39985.341Chrysemys_picta_bellii
ENSAPEG00000019526cpsf39769.266ENSCING00000007214-9868.135Ciona_intestinalis
ENSAPEG00000019526cpsf39876.023ENSCANG00000034435CPSF39976.023Colobus_angolensis_palliatus
ENSAPEG00000019526cpsf39886.287ENSCGRG00001013134Cpsf39985.272Cricetulus_griseus_chok1gshd
ENSAPEG00000019526cpsf39886.287ENSCGRG00000018319Cpsf39985.272Cricetulus_griseus_crigri
ENSAPEG00000019526cpsf39988.889ENSCSEG00000002021CPSF39987.442Cynoglossus_semilaevis
ENSAPEG00000019526cpsf39989.041ENSCVAG00000015067CPSF39988.372Cyprinodon_variegatus
ENSAPEG00000019526cpsf39988.889ENSDARG00000027649cpsf310086.957Danio_rerio
ENSAPEG00000019526cpsf39885.692ENSDNOG00000008940CPSF39584.728Dasypus_novemcinctus
ENSAPEG00000019526cpsf39786.883ENSDORG00000014263Cpsf39986.883Dipodomys_ordii
ENSAPEG00000019526cpsf39868.252FBgn0261065Cpsf739966.862Drosophila_melanogaster
ENSAPEG00000019526cpsf39774.537ENSETEG00000003893CPSF39974.537Echinops_telfairi
ENSAPEG00000019526cpsf39979.027ENSEBUG00000009018cpsf39975.141Eptatretus_burgeri
ENSAPEG00000019526cpsf39786.728ENSEASG00005003970CPSF39985.567Equus_asinus_asinus
ENSAPEG00000019526cpsf39786.728ENSECAG00000019911CPSF39690.878Equus_caballus
ENSAPEG00000019526cpsf39871.341ENSEEUG00000015422CPSF39970.987Erinaceus_europaeus
ENSAPEG00000019526cpsf39991.629ENSELUG00000013775cpsf39990.566Esox_lucius
ENSAPEG00000019526cpsf39786.728ENSFCAG00000007852CPSF39985.567Felis_catus
ENSAPEG00000019526cpsf310081.633ENSFALG00000006572CPSF310084.853Ficedula_albicollis
ENSAPEG00000019526cpsf39885.420ENSFDAG00000006317CPSF39985.420Fukomys_damarensis
ENSAPEG00000019526cpsf36365.366ENSFHEG00000012186CPSF310067.073Fundulus_heteroclitus
ENSAPEG00000019526cpsf310093.586ENSFHEG00000014774cpsf310093.586Fundulus_heteroclitus
ENSAPEG00000019526cpsf39991.629ENSGMOG00000003157cpsf310090.131Gadus_morhua
ENSAPEG00000019526cpsf39986.626ENSGALG00000016424CPSF39985.486Gallus_gallus
ENSAPEG00000019526cpsf39989.802ENSGAFG00000008016CPSF310088.696Gambusia_affinis
ENSAPEG00000019526cpsf310091.097ENSGAFG00000019449cpsf310091.097Gambusia_affinis
ENSAPEG00000019526cpsf37379.657ENSGAGG00000025583CPSF39380.728Gopherus_agassizii
ENSAPEG00000019526cpsf39784.465ENSGGOG00000001757CPSF39196.774Gorilla_gorilla
ENSAPEG00000019526cpsf36380.348ENSHBUG00000014332CPSF310080.348Haplochromis_burtoni
ENSAPEG00000019526cpsf310095.627ENSHBUG00000001188cpsf310095.627Haplochromis_burtoni
ENSAPEG00000019526cpsf39885.714ENSHGLG00000000666CPSF39885.714Heterocephalus_glaber_female
ENSAPEG00000019526cpsf39885.714ENSHGLG00100007765CPSF39885.714Heterocephalus_glaber_male
ENSAPEG00000019526cpsf39988.280ENSHCOG00000015957CPSF39986.919Hippocampus_comes
ENSAPEG00000019526cpsf39993.151ENSHCOG00000007251cpsf39992.398Hippocampus_comes
ENSAPEG00000019526cpsf39989.802ENSIPUG00000023488cpsf39988.372Ictalurus_punctatus
ENSAPEG00000019526cpsf39786.420ENSSTOG00000004476CPSF39985.272Ictidomys_tridecemlineatus
ENSAPEG00000019526cpsf39886.154ENSJJAG00000023415Cpsf39984.897Jaculus_jaculus
ENSAPEG00000019526cpsf39989.041ENSKMAG00000007317CPSF39987.791Kryptolebias_marmoratus
ENSAPEG00000019526cpsf310094.606ENSKMAG00000002806cpsf310094.606Kryptolebias_marmoratus
ENSAPEG00000019526cpsf39986.131ENSLBEG00000020569cpsf39686.131Labrus_bergylta
ENSAPEG00000019526cpsf35888.283ENSLBEG00000015018-9989.305Labrus_bergylta
ENSAPEG00000019526cpsf39988.906ENSLBEG00000013492CPSF39988.906Labrus_bergylta
ENSAPEG00000019526cpsf39981.307ENSLACG00000008308CPSF39980.145Latimeria_chalumnae
ENSAPEG00000019526cpsf39989.697ENSLOCG00000016823cpsf310088.456Lepisosteus_oculatus
ENSAPEG00000019526cpsf39785.648ENSLAFG00000009467CPSF39984.536Loxodonta_africana
ENSAPEG00000019526cpsf39786.574ENSMFAG00000001339CPSF39493.750Macaca_fascicularis
ENSAPEG00000019526cpsf39981.890ENSMMUG00000018038CPSF39293.750Macaca_mulatta
ENSAPEG00000019526cpsf39096.800ENSMNEG00000039447CPSF39996.800Macaca_nemestrina
ENSAPEG00000019526cpsf39786.728ENSMLEG00000026825CPSF39296.767Mandrillus_leucophaeus
ENSAPEG00000019526cpsf39986.667ENSMAMG00000008835CPSF39986.667Mastacembelus_armatus
ENSAPEG00000019526cpsf310093.732ENSMAMG00000003076cpsf310093.732Mastacembelus_armatus
ENSAPEG00000019526cpsf39989.193ENSMZEG00005006258CPSF310087.971Maylandia_zebra
ENSAPEG00000019526cpsf310095.627ENSMZEG00005014358cpsf310095.627Maylandia_zebra
ENSAPEG00000019526cpsf39686.792ENSMGAG00000013995CPSF310085.607Meleagris_gallopavo
ENSAPEG00000019526cpsf35874.332ENSMAUG00000000166Cpsf39975.134Mesocricetus_auratus
ENSAPEG00000019526cpsf39880.764ENSMICG00000002363CPSF39980.764Microcebus_murinus
ENSAPEG00000019526cpsf39883.111ENSMOCG00000020067Cpsf39587.987Microtus_ochrogaster
ENSAPEG00000019526cpsf37878.369ENSMMOG00000011923CPSF38578.369Mola_mola
ENSAPEG00000019526cpsf39985.531ENSMMOG00000018212CPSF39886.427Mola_mola
ENSAPEG00000019526cpsf39785.344ENSMODG00000014703CPSF39984.111Monodelphis_domestica
ENSAPEG00000019526cpsf39683.882ENSMALG00000011474CPSF39687.288Monopterus_albus
ENSAPEG00000019526cpsf310095.481ENSMALG00000016416cpsf310095.481Monopterus_albus
ENSAPEG00000019526cpsf39786.728MGP_CAROLIEiJ_G0017640Cpsf39985.567Mus_caroli
ENSAPEG00000019526cpsf39786.728ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSAPEG00000019526cpsf39786.574MGP_PahariEiJ_G0029397Cpsf39985.420Mus_pahari
ENSAPEG00000019526cpsf39786.728MGP_SPRETEiJ_G0018481Cpsf39985.567Mus_spretus
ENSAPEG00000019526cpsf39786.883ENSMPUG00000013213CPSF39985.735Mustela_putorius_furo
ENSAPEG00000019526cpsf39786.903ENSMLUG00000010636CPSF39985.588Myotis_lucifugus
ENSAPEG00000019526cpsf39886.287ENSNGAG00000019836Cpsf39985.272Nannospalax_galili
ENSAPEG00000019526cpsf310095.190ENSNBRG00000004770cpsf310095.190Neolamprologus_brichardi
ENSAPEG00000019526cpsf39986.142ENSNBRG00000010525CPSF39986.328Neolamprologus_brichardi
ENSAPEG00000019526cpsf39786.574ENSNLEG00000013359CPSF39196.774Nomascus_leucogenys
ENSAPEG00000019526cpsf39855.523ENSMEUG00000013117-9955.670Notamacropus_eugenii
ENSAPEG00000019526cpsf39976.946ENSOPRG00000008902CPSF39976.946Ochotona_princeps
ENSAPEG00000019526cpsf39886.156ENSODEG00000003129CPSF39986.156Octodon_degus
ENSAPEG00000019526cpsf310095.335ENSONIG00000018812cpsf310095.335Oreochromis_niloticus
ENSAPEG00000019526cpsf38881.673ENSOANG00000008577CPSF39982.562Ornithorhynchus_anatinus
ENSAPEG00000019526cpsf39786.728ENSOCUG00000003728CPSF39985.567Oryctolagus_cuniculus
ENSAPEG00000019526cpsf310092.857ENSORLG00000018854cpsf310092.857Oryzias_latipes
ENSAPEG00000019526cpsf310093.003ENSORLG00020013331cpsf310093.003Oryzias_latipes_hni
ENSAPEG00000019526cpsf310092.857ENSORLG00015011017cpsf310092.857Oryzias_latipes_hsok
ENSAPEG00000019526cpsf310093.440ENSOMEG00000010647cpsf39693.440Oryzias_melastigma
ENSAPEG00000019526cpsf39876.271ENSOGAG00000001680CPSF39975.700Otolemur_garnettii
ENSAPEG00000019526cpsf39786.728ENSOARG00000015073CPSF39985.567Ovis_aries
ENSAPEG00000019526cpsf39786.728ENSPPAG00000042457CPSF39196.774Pan_paniscus
ENSAPEG00000019526cpsf39786.728ENSPPRG00000016790CPSF39985.714Panthera_pardus
ENSAPEG00000019526cpsf39786.862ENSPTIG00000003920CPSF39985.841Panthera_tigris_altaica
ENSAPEG00000019526cpsf39786.728ENSPTRG00000011638CPSF39196.774Pan_troglodytes
ENSAPEG00000019526cpsf39786.728ENSPANG00000016798CPSF39493.750Papio_anubis
ENSAPEG00000019526cpsf39989.954ENSPKIG00000023646cpsf310088.696Paramormyrops_kingsleyae
ENSAPEG00000019526cpsf39885.561ENSPSIG00000016144CPSF39984.311Pelodiscus_sinensis
ENSAPEG00000019526cpsf310087.781ENSPMGG00000006141-10087.781Periophthalmus_magnuspinnatus
ENSAPEG00000019526cpsf36379.800ENSPMGG00000015311CPSF310080.494Periophthalmus_magnuspinnatus
ENSAPEG00000019526cpsf39786.574ENSPEMG00000017668Cpsf39985.420Peromyscus_maniculatus_bairdii
ENSAPEG00000019526cpsf38189.134ENSPMAG00000004841cpsf39989.134Petromyzon_marinus
ENSAPEG00000019526cpsf39586.593ENSPCIG00000009823CPSF39885.890Phascolarctos_cinereus
ENSAPEG00000019526cpsf310093.732ENSPFOG00000015922cpsf310093.732Poecilia_formosa
ENSAPEG00000019526cpsf39989.498ENSPFOG00000010418-10088.406Poecilia_formosa
ENSAPEG00000019526cpsf36380.494ENSPLAG00000021300-10081.975Poecilia_latipinna
ENSAPEG00000019526cpsf310093.732ENSPLAG00000000882cpsf310093.732Poecilia_latipinna
ENSAPEG00000019526cpsf310093.878ENSPMEG00000018309cpsf310093.878Poecilia_mexicana
ENSAPEG00000019526cpsf310083.043ENSPREG00000004482CPSF310083.043Poecilia_reticulata
ENSAPEG00000019526cpsf310091.228ENSPREG00000014875cpsf310091.228Poecilia_reticulata
ENSAPEG00000019526cpsf39881.296ENSPPYG00000012666CPSF39981.296Pongo_abelii
ENSAPEG00000019526cpsf38865.160ENSPCAG00000015042CPSF38965.160Procavia_capensis
ENSAPEG00000019526cpsf38886.159ENSPCOG00000023016CPSF39986.159Propithecus_coquereli
ENSAPEG00000019526cpsf39786.728ENSPVAG00000005324CPSF39985.588Pteropus_vampyrus
ENSAPEG00000019526cpsf38892.153ENSPNYG00000021047CPSF39192.153Pundamilia_nyererei
ENSAPEG00000019526cpsf310095.627ENSPNYG00000004405cpsf310095.627Pundamilia_nyererei
ENSAPEG00000019526cpsf39989.362ENSPNAG00000023060cpsf39988.081Pygocentrus_nattereri
ENSAPEG00000019526cpsf39786.728ENSRNOG00000052418Cpsf39985.567Rattus_norvegicus
ENSAPEG00000019526cpsf39880.412ENSRBIG00000041615CPSF39981.240Rhinopithecus_bieti
ENSAPEG00000019526cpsf39786.728ENSRROG00000033792CPSF39985.567Rhinopithecus_roxellana
ENSAPEG00000019526cpsf39540.515YLR277CYSH19739.894Saccharomyces_cerevisiae
ENSAPEG00000019526cpsf39681.654ENSSBOG00000027263CPSF39781.654Saimiri_boliviensis_boliviensis
ENSAPEG00000019526cpsf39786.728ENSSHAG00000007024CPSF39985.420Sarcophilus_harrisii
ENSAPEG00000019526cpsf39989.802ENSSFOG00015002108cpsf310088.406Scleropages_formosus
ENSAPEG00000019526cpsf39987.879ENSSMAG00000020534CPSF39788.128Scophthalmus_maximus
ENSAPEG00000019526cpsf39989.193ENSSDUG00000018498CPSF310087.971Seriola_dumerili
ENSAPEG00000019526cpsf310095.335ENSSDUG00000002828cpsf39795.335Seriola_dumerili
ENSAPEG00000019526cpsf310095.335ENSSLDG00000008469cpsf39795.335Seriola_lalandi_dorsalis
ENSAPEG00000019526cpsf39989.193ENSSLDG00000005234CPSF310087.971Seriola_lalandi_dorsalis
ENSAPEG00000019526cpsf38883.239ENSSARG00000005186CPSF38983.239Sorex_araneus
ENSAPEG00000019526cpsf39981.487ENSSPUG00000015525CPSF39784.454Sphenodon_punctatus
ENSAPEG00000019526cpsf310098.397ENSSPAG00000018579cpsf310098.397Stegastes_partitus
ENSAPEG00000019526cpsf39989.346ENSSPAG00000002906CPSF310088.116Stegastes_partitus
ENSAPEG00000019526cpsf39786.728ENSSSCG00000020799CPSF39985.567Sus_scrofa
ENSAPEG00000019526cpsf39985.316ENSTGUG00000013016CPSF39985.316Taeniopygia_guttata
ENSAPEG00000019526cpsf36373.737ENSTRUG00000013905CPSF39973.737Takifugu_rubripes
ENSAPEG00000019526cpsf39992.409ENSTRUG00000007030cpsf39892.409Takifugu_rubripes
ENSAPEG00000019526cpsf38490.634ENSTBEG00000002707CPSF38490.634Tupaia_belangeri
ENSAPEG00000019526cpsf38673.479ENSTTRG00000000861CPSF38773.479Tursiops_truncatus
ENSAPEG00000019526cpsf39786.728ENSUAMG00000007535CPSF39585.866Ursus_americanus
ENSAPEG00000019526cpsf39982.047ENSUMAG00000003676CPSF39490.502Ursus_maritimus
ENSAPEG00000019526cpsf39585.647ENSVPAG00000008041CPSF310085.647Vicugna_pacos
ENSAPEG00000019526cpsf39786.728ENSVVUG00000002194CPSF39985.567Vulpes_vulpes
ENSAPEG00000019526cpsf39986.322ENSXETG00000008263cpsf39984.928Xenopus_tropicalis
ENSAPEG00000019526cpsf35878.495ENSXCOG00000000957-8780.108Xiphophorus_couchianus
ENSAPEG00000019526cpsf39994.673ENSXCOG00000019695cpsf310093.294Xiphophorus_couchianus
ENSAPEG00000019526cpsf39995.129ENSXMAG00000009784cpsf310093.732Xiphophorus_maculatus
ENSAPEG00000019526cpsf39989.802ENSXMAG00000027291CPSF310088.551Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us