EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000019962 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 107926 bases
Position: chr10:9082705-9190630
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000028177	RRM_1	PF00076.22	3.5e-13	1	1
ENSAPEP00000028148	RRM_1	PF00076.22	3.7e-13	1	1
ENSAPEP00000028165	RRM_1	PF00076.22	3.7e-13	1	1
ENSAPEP00000028138	RRM_1	PF00076.22	3.9e-13	1	1
ENSAPEP00000028128	RRM_1	PF00076.22	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000028896	-	1519	-	ENSAPEP00000028148	311 (aa)	-	-
ENSAPET00000028884	-	1622	-	ENSAPEP00000028138	321 (aa)	-	-
ENSAPET00000028874	-	1622	-	ENSAPEP00000028128	321 (aa)	-	-
ENSAPET00000028925	-	885	-	ENSAPEP00000028177	294 (aa)	-	-
ENSAPET00000028913	-	1318	-	ENSAPEP00000028165	311 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000019962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000019962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000019962	-	72	52.358	ENSAPEG00000024106	raly	65	52.830
ENSAPEG00000019962	-	85	83.032	ENSAPEG00000001489	-	91	82.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000019962	-	97	47.222	ENSG00000184672	RALYL	93	75.949	Homo_sapiens
ENSAPEG00000019962	-	85	82.671	ENSAPOG00000006963	hnrnpc	91	82.206	Acanthochromis_polyacanthus
ENSAPEG00000019962	-	82	83.784	ENSACIG00000000270	-	83	84.932	Amphilophus_citrinellus
ENSAPEG00000019962	-	100	81.633	ENSACIG00000016568	-	100	82.313	Amphilophus_citrinellus
ENSAPEG00000019962	-	100	99.065	ENSAOCG00000021616	-	100	99.065	Amphiprion_ocellaris
ENSAPEG00000019962	-	85	83.032	ENSAOCG00000003896	-	91	82.562	Amphiprion_ocellaris
ENSAPEG00000019962	-	82	83.333	ENSATEG00000011734	-	85	81.783	Anabas_testudineus
ENSAPEG00000019962	-	85	95.131	ENSATEG00000018006	-	100	81.081	Anabas_testudineus
ENSAPEG00000019962	-	98	46.382	ENSAPLG00000015574	RALYL	84	51.822	Anas_platyrhynchos
ENSAPEG00000019962	-	72	55.752	ENSACAG00000028464	RALYL	83	52.227	Anolis_carolinensis
ENSAPEG00000019962	-	97	47.222	ENSANAG00000023383	RALYL	78	56.306	Aotus_nancymaae
ENSAPEG00000019962	-	85	92.884	ENSACLG00000005707	-	90	93.258	Astatotilapia_calliptera
ENSAPEG00000019962	-	81	83.004	ENSACLG00000013636	-	85	81.323	Astatotilapia_calliptera
ENSAPEG00000019962	-	81	83.399	ENSACLG00000000995	-	81	86.364	Astatotilapia_calliptera
ENSAPEG00000019962	-	85	79.167	ENSAMXG00000034915	zgc:55733	86	77.200	Astyanax_mexicanus
ENSAPEG00000019962	-	66	79.275	ENSAMXG00000042946	hnrnpc	97	75.916	Astyanax_mexicanus
ENSAPEG00000019962	-	97	47.222	ENSCJAG00000000402	RALYL	78	56.306	Callithrix_jacchus
ENSAPEG00000019962	-	78	52.049	ENSCPOG00000012314	RALYL	82	52.066	Cavia_porcellus
ENSAPEG00000019962	-	71	58.491	ENSCCAG00000025003	RALYL	77	75.949	Cebus_capucinus
ENSAPEG00000019962	-	97	47.222	ENSCATG00000042145	RALYL	78	56.306	Cercocebus_atys
ENSAPEG00000019962	-	97	46.154	ENSCLAG00000005228	RALYL	83	52.033	Chinchilla_lanigera
ENSAPEG00000019962	-	72	54.425	ENSCHOG00000013228	RALYL	76	51.064	Choloepus_hoffmanni
ENSAPEG00000019962	-	97	47.222	ENSCANG00000039144	RALYL	78	56.306	Colobus_angolensis_palliatus
ENSAPEG00000019962	-	97	46.333	ENSCGRG00001009241	Ralyl	83	51.417	Cricetulus_griseus_chok1gshd
ENSAPEG00000019962	-	81	88.446	ENSCSEG00000021349	-	79	86.275	Cynoglossus_semilaevis
ENSAPEG00000019962	-	74	77.273	ENSCSEG00000019769	-	74	75.000	Cynoglossus_semilaevis
ENSAPEG00000019962	-	89	65.836	ENSCVAG00000002797	-	99	57.576	Cyprinodon_variegatus
ENSAPEG00000019962	-	85	90.977	ENSCVAG00000016981	-	81	90.602	Cyprinodon_variegatus
ENSAPEG00000019962	-	85	80.682	ENSDARG00000103845	zgc:55733	90	77.600	Danio_rerio
ENSAPEG00000019962	-	79	80.972	ENSDARG00000053810	hnrnpc	80	75.781	Danio_rerio
ENSAPEG00000019962	-	97	46.667	ENSDORG00000003721	Ralyl	84	52.209	Dipodomys_ordii
ENSAPEG00000019962	-	55	56.322	ENSETEG00000014028	RALYL	82	59.259	Echinops_telfairi
ENSAPEG00000019962	-	73	46.667	ENSEBUG00000012363	hnrnpc	67	45.614	Eptatretus_burgeri
ENSAPEG00000019962	-	71	50.000	ENSEBUG00000006049	RALYL	74	46.919	Eptatretus_burgeri
ENSAPEG00000019962	-	97	46.333	ENSEEUG00000007202	RALYL	84	52.033	Erinaceus_europaeus
ENSAPEG00000019962	-	85	79.779	ENSELUG00000004132	-	99	69.805	Esox_lucius
ENSAPEG00000019962	-	80	80.377	ENSELUG00000007714	-	99	70.000	Esox_lucius
ENSAPEG00000019962	-	72	57.870	ENSFALG00000008647	RALYL	97	57.009	Ficedula_albicollis
ENSAPEG00000019962	-	82	86.667	ENSFHEG00000007278	-	82	85.926	Fundulus_heteroclitus
ENSAPEG00000019962	-	88	76.173	ENSFHEG00000003605	-	84	76.744	Fundulus_heteroclitus
ENSAPEG00000019962	-	71	58.879	ENSGALG00000036938	RALYL	83	51.807	Gallus_gallus
ENSAPEG00000019962	-	88	75.090	ENSGAFG00000020486	-	81	78.899	Gambusia_affinis
ENSAPEG00000019962	-	100	81.973	ENSGAFG00000020992	-	100	79.932	Gambusia_affinis
ENSAPEG00000019962	-	74	76.959	ENSGACG00000018932	-	88	70.588	Gasterosteus_aculeatus
ENSAPEG00000019962	-	84	85.926	ENSGACG00000017772	-	97	90.079	Gasterosteus_aculeatus
ENSAPEG00000019962	-	97	47.222	ENSGGOG00000000841	RALYL	78	56.306	Gorilla_gorilla
ENSAPEG00000019962	-	81	83.794	ENSHBUG00000018342	-	83	82.101	Haplochromis_burtoni
ENSAPEG00000019962	-	85	92.509	ENSHBUG00000010527	-	84	92.884	Haplochromis_burtoni
ENSAPEG00000019962	-	97	45.819	ENSHGLG00000004866	RALYL	83	51.626	Heterocephalus_glaber_female
ENSAPEG00000019962	-	97	45.819	ENSHGLG00100017480	RALYL	83	51.626	Heterocephalus_glaber_male
ENSAPEG00000019962	-	84	85.294	ENSHCOG00000012333	hnrnpc	91	85.560	Hippocampus_comes
ENSAPEG00000019962	-	83	81.395	ENSIPUG00000011271	hnrnpc	97	81.166	Ictalurus_punctatus
ENSAPEG00000019962	-	85	79.924	ENSIPUG00000008666	zgc:55733	94	79.535	Ictalurus_punctatus
ENSAPEG00000019962	-	97	46.333	ENSSTOG00000012583	RALYL	84	51.822	Ictidomys_tridecemlineatus
ENSAPEG00000019962	-	89	77.778	ENSKMAG00000011170	-	83	80.156	Kryptolebias_marmoratus
ENSAPEG00000019962	-	100	78.344	ENSKMAG00000018265	-	97	78.344	Kryptolebias_marmoratus
ENSAPEG00000019962	-	85	91.635	ENSLBEG00000006193	-	80	92.941	Labrus_bergylta
ENSAPEG00000019962	-	94	70.066	ENSLBEG00000024418	-	94	69.550	Labrus_bergylta
ENSAPEG00000019962	-	92	73.793	ENSLBEG00000006979	-	93	73.455	Labrus_bergylta
ENSAPEG00000019962	-	84	69.030	ENSLOCG00000002560	hnrnpc	89	69.202	Lepisosteus_oculatus
ENSAPEG00000019962	-	97	47.222	ENSMNEG00000033288	RALYL	78	56.306	Macaca_nemestrina
ENSAPEG00000019962	-	97	47.222	ENSMLEG00000038284	RALYL	78	56.306	Mandrillus_leucophaeus
ENSAPEG00000019962	-	85	93.633	ENSMAMG00000008033	-	90	94.007	Mastacembelus_armatus
ENSAPEG00000019962	-	81	84.190	ENSMAMG00000012236	-	85	80.156	Mastacembelus_armatus
ENSAPEG00000019962	-	85	92.884	ENSMZEG00005024249	-	84	93.258	Maylandia_zebra
ENSAPEG00000019962	-	81	83.399	ENSMZEG00005020460	-	88	79.693	Maylandia_zebra
ENSAPEG00000019962	-	97	46.333	ENSMAUG00000015149	Ralyl	83	51.417	Mesocricetus_auratus
ENSAPEG00000019962	-	97	47.059	ENSMICG00000005558	RALYL	80	75.949	Microcebus_murinus
ENSAPEG00000019962	-	97	46.333	ENSMOCG00000017371	Ralyl	79	53.390	Microtus_ochrogaster
ENSAPEG00000019962	-	84	84.030	ENSMMOG00000021465	-	89	83.594	Mola_mola
ENSAPEG00000019962	-	80	93.976	ENSMMOG00000019520	-	84	92.430	Mola_mola
ENSAPEG00000019962	-	82	77.255	ENSMALG00000007520	-	85	74.118	Monopterus_albus
ENSAPEG00000019962	-	85	89.811	ENSMALG00000014623	-	84	90.566	Monopterus_albus
ENSAPEG00000019962	-	97	46.000	ENSMUSG00000039717	Ralyl	93	74.684	Mus_musculus
ENSAPEG00000019962	-	97	47.000	ENSMPUG00000010724	RALYL	83	51.012	Mustela_putorius_furo
ENSAPEG00000019962	-	97	46.333	ENSNGAG00000013375	Ralyl	83	51.417	Nannospalax_galili
ENSAPEG00000019962	-	99	82.274	ENSNBRG00000015676	-	97	81.940	Neolamprologus_brichardi
ENSAPEG00000019962	-	82	83.721	ENSNBRG00000004912	-	95	79.741	Neolamprologus_brichardi
ENSAPEG00000019962	-	97	47.222	ENSNLEG00000002702	RALYL	75	56.250	Nomascus_leucogenys
ENSAPEG00000019962	-	61	50.777	ENSOPRG00000013650	-	100	48.731	Ochotona_princeps
ENSAPEG00000019962	-	97	45.819	ENSODEG00000001012	RALYL	79	54.043	Octodon_degus
ENSAPEG00000019962	-	85	92.509	ENSONIG00000018350	-	84	92.884	Oreochromis_niloticus
ENSAPEG00000019962	-	81	84.190	ENSONIG00000007859	-	91	82.642	Oreochromis_niloticus
ENSAPEG00000019962	-	100	76.875	ENSORLG00000003144	-	97	76.875	Oryzias_latipes
ENSAPEG00000019962	-	81	73.725	ENSORLG00000009999	-	83	71.429	Oryzias_latipes
ENSAPEG00000019962	-	81	73.333	ENSORLG00020018228	hnrnpc	83	71.042	Oryzias_latipes_hni
ENSAPEG00000019962	-	85	90.842	ENSORLG00015009460	-	82	91.209	Oryzias_latipes_hsok
ENSAPEG00000019962	-	81	73.725	ENSORLG00015019755	-	83	71.429	Oryzias_latipes_hsok
ENSAPEG00000019962	-	85	94.361	ENSOMEG00000022665	-	83	94.737	Oryzias_melastigma
ENSAPEG00000019962	-	81	75.294	ENSOMEG00000020488	-	83	72.973	Oryzias_melastigma
ENSAPEG00000019962	-	97	47.222	ENSPPAG00000038705	RALYL	78	56.306	Pan_paniscus
ENSAPEG00000019962	-	97	49.310	ENSPPRG00000018612	RALYL	82	54.008	Panthera_pardus
ENSAPEG00000019962	-	97	49.310	ENSPTIG00000020331	RALYL	82	54.008	Panthera_tigris_altaica
ENSAPEG00000019962	-	97	47.222	ENSPTRG00000020381	RALYL	78	56.306	Pan_troglodytes
ENSAPEG00000019962	-	97	47.222	ENSPANG00000029305	RALYL	78	56.306	Papio_anubis
ENSAPEG00000019962	-	85	79.412	ENSPKIG00000008592	-	97	70.418	Paramormyrops_kingsleyae
ENSAPEG00000019962	-	84	78.277	ENSPKIG00000022837	-	96	71.895	Paramormyrops_kingsleyae
ENSAPEG00000019962	-	71	56.250	ENSPSIG00000011135	RALYL	79	53.814	Pelodiscus_sinensis
ENSAPEG00000019962	-	99	77.740	ENSPMGG00000013144	-	99	76.370	Periophthalmus_magnuspinnatus
ENSAPEG00000019962	-	70	80.583	ENSPMGG00000017774	-	96	64.948	Periophthalmus_magnuspinnatus
ENSAPEG00000019962	-	97	46.333	ENSPEMG00000016447	Ralyl	83	51.417	Peromyscus_maniculatus_bairdii
ENSAPEG00000019962	-	72	53.744	ENSPMAG00000002407	RALYL	97	52.444	Petromyzon_marinus
ENSAPEG00000019962	-	100	77.389	ENSPFOG00000002643	-	84	90.335	Poecilia_formosa
ENSAPEG00000019962	-	88	75.725	ENSPFOG00000001583	-	83	77.519	Poecilia_formosa
ENSAPEG00000019962	-	88	73.818	ENSPLAG00000015305	-	83	75.486	Poecilia_latipinna
ENSAPEG00000019962	-	100	77.707	ENSPLAG00000000061	-	82	91.698	Poecilia_latipinna
ENSAPEG00000019962	-	85	91.321	ENSPMEG00000016524	-	82	90.943	Poecilia_mexicana
ENSAPEG00000019962	-	88	77.256	ENSPMEG00000004802	-	83	77.519	Poecilia_mexicana
ENSAPEG00000019962	-	81	77.953	ENSPREG00000007928	-	83	76.357	Poecilia_reticulata
ENSAPEG00000019962	-	85	91.321	ENSPREG00000001852	-	89	90.943	Poecilia_reticulata
ENSAPEG00000019962	-	71	48.325	ENSPPYG00000018710	-	69	71.154	Pongo_abelii
ENSAPEG00000019962	-	86	48.264	ENSPVAG00000010821	RALYL	78	53.419	Pteropus_vampyrus
ENSAPEG00000019962	-	82	84.496	ENSPNYG00000020293	-	87	81.712	Pundamilia_nyererei
ENSAPEG00000019962	-	99	83.904	ENSPNYG00000003747	-	90	92.884	Pundamilia_nyererei
ENSAPEG00000019962	-	85	75.465	ENSPNAG00000019200	zgc:55733	83	75.290	Pygocentrus_nattereri
ENSAPEG00000019962	-	79	80.894	ENSPNAG00000015686	hnrnpc	89	79.623	Pygocentrus_nattereri
ENSAPEG00000019962	-	97	47.222	ENSRROG00000023925	RALYL	82	74.074	Rhinopithecus_roxellana
ENSAPEG00000019962	-	85	77.860	ENSSFOG00015012015	-	99	72.355	Scleropages_formosus
ENSAPEG00000019962	-	81	79.008	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSAPEG00000019962	-	99	81.145	ENSSMAG00000011147	-	99	80.135	Scophthalmus_maximus
ENSAPEG00000019962	-	81	80.632	ENSSMAG00000013592	-	89	78.445	Scophthalmus_maximus
ENSAPEG00000019962	-	100	75.728	ENSSDUG00000006730	-	84	89.474	Seriola_dumerili
ENSAPEG00000019962	-	87	81.387	ENSSDUG00000001723	-	91	81.206	Seriola_dumerili
ENSAPEG00000019962	-	87	81.752	ENSSLDG00000007454	-	83	83.658	Seriola_lalandi_dorsalis
ENSAPEG00000019962	-	85	89.850	ENSSLDG00000007474	-	92	89.474	Seriola_lalandi_dorsalis
ENSAPEG00000019962	-	85	81.227	ENSSPAG00000023204	-	91	83.630	Stegastes_partitus
ENSAPEG00000019962	-	93	94.828	ENSSPAG00000013996	-	84	97.358	Stegastes_partitus
ENSAPEG00000019962	-	71	56.250	ENSTGUG00000011689	RALYL	79	54.545	Taeniopygia_guttata
ENSAPEG00000019962	-	82	82.422	ENSTRUG00000020158	-	99	69.508	Takifugu_rubripes
ENSAPEG00000019962	-	82	80.385	ENSTNIG00000007427	-	84	80.385	Tetraodon_nigroviridis
ENSAPEG00000019962	-	81	80.315	ENSTNIG00000000334	-	94	78.544	Tetraodon_nigroviridis
ENSAPEG00000019962	-	72	49.554	ENSTBEG00000005551	RALYL	89	49.345	Tupaia_belangeri
ENSAPEG00000019962	-	97	45.085	ENSTTRG00000015762	RALYL	83	50.622	Tursiops_truncatus
ENSAPEG00000019962	-	97	44.637	ENSVPAG00000008501	RALYL	83	49.367	Vicugna_pacos
ENSAPEG00000019962	-	53	90.798	ENSXCOG00000019434	-	69	89.571	Xiphophorus_couchianus
ENSAPEG00000019962	-	92	68.729	ENSXCOG00000006552	-	82	70.196	Xiphophorus_couchianus
ENSAPEG00000019962	-	85	91.321	ENSXMAG00000022849	-	86	90.943	Xiphophorus_maculatus
ENSAPEG00000019962	-	88	75.451	ENSXMAG00000009333	-	83	75.581	Xiphophorus_maculatus