EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000020115 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8637 bases
Position: chr18:32544615-32553251
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000028390	RRM_1	PF00076.22	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000029139	SCAF8-201	3771	-	ENSAPEP00000028390	1256 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000020115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000020115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000020115	SCAF8	51	41.643	ENSAPOG00000002946	scaf4a	85	40.571	Acanthochromis_polyacanthus
ENSAPEG00000020115	SCAF8	68	85.048	ENSAPOG00000015527	SCAF8	98	83.696	Acanthochromis_polyacanthus
ENSAPEG00000020115	SCAF8	68	88.384	ENSAOCG00000002421	SCAF8	98	83.382	Amphiprion_ocellaris
ENSAPEG00000020115	SCAF8	68	70.833	ENSACLG00000018828	SCAF8	98	75.091	Astatotilapia_calliptera
ENSAPEG00000020115	SCAF8	61	72.000	ENSCAPG00000003300	SCAF8	72	72.000	Cavia_aperea
ENSAPEG00000020115	SCAF8	77	53.896	ENSCPOG00000022216	-	85	54.156	Cavia_porcellus
ENSAPEG00000020115	SCAF8	78	48.843	ENSCPOG00000030311	-	90	48.387	Cavia_porcellus
ENSAPEG00000020115	SCAF8	68	67.267	ENSCSEG00000000043	-	98	70.622	Cynoglossus_semilaevis
ENSAPEG00000020115	SCAF8	68	64.561	ENSCVAG00000000925	SCAF8	99	69.401	Cyprinodon_variegatus
ENSAPEG00000020115	SCAF8	68	64.850	ENSFHEG00000008284	SCAF8	75	79.923	Fundulus_heteroclitus
ENSAPEG00000020115	SCAF8	68	66.631	ENSGAFG00000018033	SCAF8	75	80.325	Gambusia_affinis
ENSAPEG00000020115	SCAF8	68	70.620	ENSHBUG00000019537	SCAF8	98	74.363	Haplochromis_burtoni
ENSAPEG00000020115	SCAF8	68	70.011	ENSKMAG00000012767	SCAF8	98	74.106	Kryptolebias_marmoratus
ENSAPEG00000020115	SCAF8	88	97.015	ENSLBEG00000012484	-	93	93.960	Labrus_bergylta
ENSAPEG00000020115	SCAF8	74	72.958	ENSLACG00000001394	SCAF8	97	55.266	Latimeria_chalumnae
ENSAPEG00000020115	SCAF8	75	71.978	ENSLAFG00000000022	SCAF8	84	58.824	Loxodonta_africana
ENSAPEG00000020115	SCAF8	68	70.620	ENSMZEG00005005698	SCAF8	98	74.945	Maylandia_zebra
ENSAPEG00000020115	SCAF8	78	60.281	MGP_CAROLIEiJ_G0021016	Scaf8	84	60.409	Mus_caroli
ENSAPEG00000020115	SCAF8	78	60.281	ENSMUSG00000046201	Scaf8	84	60.409	Mus_musculus
ENSAPEG00000020115	SCAF8	56	80.737	ENSNBRG00000009067	SCAF8	97	79.223	Neolamprologus_brichardi
ENSAPEG00000020115	SCAF8	57	92.593	ENSOPRG00000018413	-	72	92.593	Ochotona_princeps
ENSAPEG00000020115	SCAF8	59	74.930	ENSONIG00000008119	SCAF8	94	78.268	Oreochromis_niloticus
ENSAPEG00000020115	SCAF8	68	65.139	ENSORLG00000017358	SCAF8	98	71.491	Oryzias_latipes
ENSAPEG00000020115	SCAF8	68	66.274	ENSORLG00020002214	SCAF8	98	71.481	Oryzias_latipes_hni
ENSAPEG00000020115	SCAF8	68	67.591	ENSORLG00015015779	SCAF8	98	71.782	Oryzias_latipes_hsok
ENSAPEG00000020115	SCAF8	68	64.637	ENSOMEG00000015471	SCAF8	98	72.303	Oryzias_melastigma
ENSAPEG00000020115	SCAF8	78	61.290	ENSPTIG00000014836	SCAF8	85	60.100	Panthera_tigris_altaica
ENSAPEG00000020115	SCAF8	55	82.026	ENSPFOG00000004176	SCAF8	98	72.073	Poecilia_formosa
ENSAPEG00000020115	SCAF8	68	66.062	ENSPLAG00000021432	SCAF8	98	72.073	Poecilia_latipinna
ENSAPEG00000020115	SCAF8	68	65.955	ENSPMEG00000007591	SCAF8	98	71.782	Poecilia_mexicana
ENSAPEG00000020115	SCAF8	68	65.848	ENSPREG00000000652	SCAF8	75	81.340	Poecilia_reticulata
ENSAPEG00000020115	SCAF8	68	90.244	ENSPCAG00000013044	SCAF8	78	68.021	Procavia_capensis
ENSAPEG00000020115	SCAF8	75	72.727	ENSPCOG00000002067	SCAF8	85	58.049	Propithecus_coquereli
ENSAPEG00000020115	SCAF8	68	71.047	ENSPNYG00000007277	SCAF8	98	75.237	Pundamilia_nyererei
ENSAPEG00000020115	SCAF8	78	60.516	ENSRBIG00000035769	SCAF8	85	59.227	Rhinopithecus_bieti
ENSAPEG00000020115	SCAF8	73	76.812	ENSSFOG00015009481	SCAF8	90	59.586	Scleropages_formosus
ENSAPEG00000020115	SCAF8	99	73.546	ENSSMAG00000008275	SCAF8	98	74.043	Scophthalmus_maximus
ENSAPEG00000020115	SCAF8	68	64.899	ENSTRUG00000009243	SCAF8	98	68.646	Takifugu_rubripes
ENSAPEG00000020115	SCAF8	53	64.658	ENSVPAG00000012465	SCAF8	90	54.557	Vicugna_pacos
ENSAPEG00000020115	SCAF8	72	63.830	ENSXETG00000013132	scaf8	77	59.693	Xenopus_tropicalis
ENSAPEG00000020115	SCAF8	68	66.169	ENSXMAG00000019192	SCAF8	98	71.636	Xiphophorus_maculatus