EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000020395 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 7681 bases
Position: chr12:28151818-28159498
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000028693	RRM_1	PF00076.22	9.6e-13	1	1
ENSAPEP00000028712	RRM_1	PF00076.22	1.1e-12	1	1
ENSAPEP00000028693	RRM_3	PF08777.11	4.8e-29	1	1
ENSAPEP00000028712	RRM_3	PF08777.11	5.1e-29	1	1
ENSAPEP00000028693	La	PF05383.17	7.2e-21	1	1
ENSAPEP00000028712	La	PF05383.17	7.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000029453	-	2066	-	ENSAPEP00000028693	384 (aa)	-	-
ENSAPET00000029472	-	2074	-	ENSAPEP00000028712	397 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000020395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000020395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000020395	ssb	100	55.501	ENSG00000138385	SSB	98	66.102	Homo_sapiens
ENSAPEG00000020395	ssb	100	97.917	ENSAPOG00000003448	ssb	100	97.917	Acanthochromis_polyacanthus
ENSAPEG00000020395	ssb	100	53.938	ENSAMEG00000010507	SSB	98	53.735	Ailuropoda_melanoleuca
ENSAPEG00000020395	ssb	96	85.676	ENSACIG00000001738	ssb	96	85.405	Amphilophus_citrinellus
ENSAPEG00000020395	ssb	100	99.479	ENSAOCG00000020398	ssb	100	99.479	Amphiprion_ocellaris
ENSAPEG00000020395	ssb	100	87.469	ENSATEG00000016884	ssb	100	87.469	Anabas_testudineus
ENSAPEG00000020395	ssb	100	53.428	ENSAPLG00000006109	SSB	99	53.318	Anas_platyrhynchos
ENSAPEG00000020395	ssb	100	53.753	ENSACAG00000017008	SSB	99	53.771	Anolis_carolinensis
ENSAPEG00000020395	ssb	100	50.739	ENSANAG00000027195	-	98	49.502	Aotus_nancymaae
ENSAPEG00000020395	ssb	100	78.947	ENSACLG00000010798	ssb	100	78.697	Astatotilapia_calliptera
ENSAPEG00000020395	ssb	100	61.614	ENSAMXG00000012606	ssb	100	63.081	Astyanax_mexicanus
ENSAPEG00000020395	ssb	100	56.296	ENSBTAG00000008716	SSB	98	55.611	Bos_taurus
ENSAPEG00000020395	ssb	78	34.641	WBGene00016653	C44E4.4	76	36.275	Caenorhabditis_elegans
ENSAPEG00000020395	ssb	100	55.911	ENSCJAG00000045073	SSB	98	55.473	Callithrix_jacchus
ENSAPEG00000020395	ssb	100	55.774	ENSCAFG00000012418	SSB	98	55.087	Canis_familiaris
ENSAPEG00000020395	ssb	100	55.774	ENSCAFG00020002900	SSB	98	55.087	Canis_lupus_dingo
ENSAPEG00000020395	ssb	100	56.158	ENSCHIG00000022624	-	98	55.473	Capra_hircus
ENSAPEG00000020395	ssb	100	52.778	ENSCHIG00000022196	-	82	58.769	Capra_hircus
ENSAPEG00000020395	ssb	99	56.049	ENSTSYG00000000097	SSB	98	55.362	Carlito_syrichta
ENSAPEG00000020395	ssb	100	56.650	ENSCPOG00000003338	SSB	98	55.970	Cavia_porcellus
ENSAPEG00000020395	ssb	100	55.911	ENSCCAG00000035147	SSB	98	55.473	Cebus_capucinus
ENSAPEG00000020395	ssb	71	51.546	ENSCATG00000036701	SSB	83	51.203	Cercocebus_atys
ENSAPEG00000020395	ssb	99	41.646	ENSCATG00000042909	-	98	41.294	Cercocebus_atys
ENSAPEG00000020395	ssb	100	56.404	ENSCLAG00000015617	-	98	55.721	Chinchilla_lanigera
ENSAPEG00000020395	ssb	98	52.770	ENSCSAG00000018390	-	95	51.979	Chlorocebus_sabaeus
ENSAPEG00000020395	ssb	100	56.158	ENSCSAG00000015200	SSB	88	55.911	Chlorocebus_sabaeus
ENSAPEG00000020395	ssb	100	56.158	ENSCHOG00000007763	SSB	98	55.473	Choloepus_hoffmanni
ENSAPEG00000020395	ssb	100	58.049	ENSCPBG00000006519	SSB	99	58.293	Chrysemys_picta_bellii
ENSAPEG00000020395	ssb	100	56.158	ENSCANG00000027695	SSB	98	55.721	Colobus_angolensis_palliatus
ENSAPEG00000020395	ssb	99	50.769	ENSCANG00000033240	-	94	50.518	Colobus_angolensis_palliatus
ENSAPEG00000020395	ssb	97	45.600	ENSCANG00000028838	-	88	45.479	Colobus_angolensis_palliatus
ENSAPEG00000020395	ssb	100	52.451	ENSCGRG00001024831	Ssb	98	52.854	Cricetulus_griseus_chok1gshd
ENSAPEG00000020395	ssb	100	52.451	ENSCGRG00000005387	Ssb	98	52.854	Cricetulus_griseus_crigri
ENSAPEG00000020395	ssb	100	85.464	ENSCSEG00000011599	ssb	100	84.962	Cynoglossus_semilaevis
ENSAPEG00000020395	ssb	100	79.500	ENSCVAG00000021558	ssb	100	80.250	Cyprinodon_variegatus
ENSAPEG00000020395	ssb	100	64.851	ENSDARG00000029252	ssb	100	64.851	Danio_rerio
ENSAPEG00000020395	ssb	100	56.158	ENSDNOG00000013450	SSB	98	55.473	Dasypus_novemcinctus
ENSAPEG00000020395	ssb	100	53.713	ENSDORG00000005543	Ssb	98	53.500	Dipodomys_ordii
ENSAPEG00000020395	ssb	88	36.441	FBgn0011638	La	78	37.578	Drosophila_melanogaster
ENSAPEG00000020395	ssb	53	64.356	ENSETEG00000004614	-	52	64.356	Echinops_telfairi
ENSAPEG00000020395	ssb	95	46.322	ENSEBUG00000001237	ssb	95	45.067	Eptatretus_burgeri
ENSAPEG00000020395	ssb	100	56.650	ENSEASG00005022835	SSB	98	55.970	Equus_asinus_asinus
ENSAPEG00000020395	ssb	100	56.650	ENSECAG00000018495	SSB	98	55.970	Equus_caballus
ENSAPEG00000020395	ssb	79	49.351	ENSEEUG00000008077	SSB	77	49.013	Erinaceus_europaeus
ENSAPEG00000020395	ssb	100	73.632	ENSELUG00000020929	ssb	100	73.881	Esox_lucius
ENSAPEG00000020395	ssb	100	57.248	ENSFCAG00000011601	SSB	98	56.576	Felis_catus
ENSAPEG00000020395	ssb	99	55.774	ENSFALG00000000930	SSB	99	55.528	Ficedula_albicollis
ENSAPEG00000020395	ssb	100	56.404	ENSFDAG00000000598	SSB	98	55.721	Fukomys_damarensis
ENSAPEG00000020395	ssb	77	76.821	ENSFHEG00000003268	ssb	94	79.805	Fundulus_heteroclitus
ENSAPEG00000020395	ssb	99	72.250	ENSGMOG00000002664	ssb	100	72.250	Gadus_morhua
ENSAPEG00000020395	ssb	98	58.594	ENSGALG00000009677	SSB	93	57.292	Gallus_gallus
ENSAPEG00000020395	ssb	100	81.638	ENSGAFG00000002749	ssb	100	82.134	Gambusia_affinis
ENSAPEG00000020395	ssb	100	79.703	ENSGACG00000005107	ssb	100	79.703	Gasterosteus_aculeatus
ENSAPEG00000020395	ssb	100	57.805	ENSGAGG00000007807	SSB	99	58.049	Gopherus_agassizii
ENSAPEG00000020395	ssb	98	49.604	ENSGGOG00000024891	-	92	49.604	Gorilla_gorilla
ENSAPEG00000020395	ssb	52	50.673	ENSGGOG00000023471	-	90	50.224	Gorilla_gorilla
ENSAPEG00000020395	ssb	100	78.947	ENSHBUG00000006584	ssb	100	78.697	Haplochromis_burtoni
ENSAPEG00000020395	ssb	100	52.672	ENSHGLG00000005832	-	98	51.928	Heterocephalus_glaber_female
ENSAPEG00000020395	ssb	99	50.995	ENSHGLG00000004478	-	98	50.372	Heterocephalus_glaber_female
ENSAPEG00000020395	ssb	100	56.068	ENSHGLG00000017580	-	98	55.528	Heterocephalus_glaber_female
ENSAPEG00000020395	ssb	100	56.068	ENSHGLG00100003084	-	98	55.528	Heterocephalus_glaber_male
ENSAPEG00000020395	ssb	100	52.250	ENSHGLG00100008767	-	98	51.515	Heterocephalus_glaber_male
ENSAPEG00000020395	ssb	99	76.826	ENSHCOG00000019011	ssb	99	76.515	Hippocampus_comes
ENSAPEG00000020395	ssb	100	64.634	ENSIPUG00000003681	SSB	100	64.634	Ictalurus_punctatus
ENSAPEG00000020395	ssb	100	55.911	ENSSTOG00000008416	SSB	98	55.224	Ictidomys_tridecemlineatus
ENSAPEG00000020395	ssb	89	46.779	ENSJJAG00000016250	-	94	46.218	Jaculus_jaculus
ENSAPEG00000020395	ssb	100	52.153	ENSJJAG00000023158	-	99	51.799	Jaculus_jaculus
ENSAPEG00000020395	ssb	100	84.673	ENSKMAG00000017317	ssb	100	84.673	Kryptolebias_marmoratus
ENSAPEG00000020395	ssb	100	85.063	ENSLBEG00000017345	ssb	100	85.063	Labrus_bergylta
ENSAPEG00000020395	ssb	100	54.768	ENSLACG00000014056	SSB	99	54.523	Latimeria_chalumnae
ENSAPEG00000020395	ssb	95	69.126	ENSLOCG00000007933	ssb	99	65.012	Lepisosteus_oculatus
ENSAPEG00000020395	ssb	98	55.471	ENSLAFG00000000867	-	99	52.969	Loxodonta_africana
ENSAPEG00000020395	ssb	78	43.144	ENSLAFG00000026721	-	98	43.144	Loxodonta_africana
ENSAPEG00000020395	ssb	100	49.383	ENSLAFG00000028909	-	99	48.642	Loxodonta_africana
ENSAPEG00000020395	ssb	93	49.584	ENSMFAG00000041478	-	90	52.000	Macaca_fascicularis
ENSAPEG00000020395	ssb	100	56.158	ENSMFAG00000039066	SSB	98	55.721	Macaca_fascicularis
ENSAPEG00000020395	ssb	98	50.000	ENSMMUG00000011724	-	77	53.681	Macaca_mulatta
ENSAPEG00000020395	ssb	100	56.158	ENSMMUG00000023051	SSB	98	55.721	Macaca_mulatta
ENSAPEG00000020395	ssb	99	40.898	ENSMMUG00000039889	-	98	40.796	Macaca_mulatta
ENSAPEG00000020395	ssb	100	47.073	ENSMNEG00000028321	SSB	82	67.568	Macaca_nemestrina
ENSAPEG00000020395	ssb	93	49.584	ENSMNEG00000034698	-	90	52.000	Macaca_nemestrina
ENSAPEG00000020395	ssb	100	56.158	ENSMLEG00000035717	SSB	98	55.721	Mandrillus_leucophaeus
ENSAPEG00000020395	ssb	100	38.765	ENSMLEG00000042644	-	78	41.538	Mandrillus_leucophaeus
ENSAPEG00000020395	ssb	100	87.437	ENSMAMG00000004800	ssb	100	87.437	Mastacembelus_armatus
ENSAPEG00000020395	ssb	100	78.947	ENSMZEG00005005749	ssb	100	78.697	Maylandia_zebra
ENSAPEG00000020395	ssb	95	60.054	ENSMGAG00000010328	SSB	100	63.285	Meleagris_gallopavo
ENSAPEG00000020395	ssb	100	56.158	ENSMICG00000028252	-	98	55.473	Microcebus_murinus
ENSAPEG00000020395	ssb	96	54.155	ENSMICG00000033304	-	93	53.388	Microcebus_murinus
ENSAPEG00000020395	ssb	100	36.946	ENSMODG00000007027	-	99	45.074	Monodelphis_domestica
ENSAPEG00000020395	ssb	96	40.214	ENSMODG00000019271	-	99	47.160	Monodelphis_domestica
ENSAPEG00000020395	ssb	96	56.693	ENSMODG00000008227	-	99	54.634	Monodelphis_domestica
ENSAPEG00000020395	ssb	95	83.106	ENSMALG00000008045	ssb	90	85.215	Monopterus_albus
ENSAPEG00000020395	ssb	100	52.289	MGP_CAROLIEiJ_G0023629	-	96	63.816	Mus_caroli
ENSAPEG00000020395	ssb	100	52.289	ENSMUSG00000068882	Ssb	96	63.816	Mus_musculus
ENSAPEG00000020395	ssb	100	52.048	MGP_PahariEiJ_G0025081	-	96	63.158	Mus_pahari
ENSAPEG00000020395	ssb	100	52.289	MGP_SPRETEiJ_G0024551	Ssb	96	63.816	Mus_spretus
ENSAPEG00000020395	ssb	100	56.650	ENSMPUG00000000785	SSB	98	55.970	Mustela_putorius_furo
ENSAPEG00000020395	ssb	100	55.422	ENSMLUG00000016316	SSB	99	55.181	Myotis_lucifugus
ENSAPEG00000020395	ssb	100	78.750	ENSNBRG00000012661	ssb	100	78.500	Neolamprologus_brichardi
ENSAPEG00000020395	ssb	100	55.911	ENSNLEG00000004958	SSB	98	55.473	Nomascus_leucogenys
ENSAPEG00000020395	ssb	87	46.588	ENSNLEG00000028754	-	76	47.077	Nomascus_leucogenys
ENSAPEG00000020395	ssb	65	63.200	ENSMEUG00000001650	-	100	63.200	Notamacropus_eugenii
ENSAPEG00000020395	ssb	93	56.250	ENSODEG00000004202	-	99	55.978	Octodon_degus
ENSAPEG00000020395	ssb	100	79.750	ENSONIG00000008776	ssb	100	79.500	Oreochromis_niloticus
ENSAPEG00000020395	ssb	100	55.911	ENSOANG00000008543	SSB	99	55.911	Ornithorhynchus_anatinus
ENSAPEG00000020395	ssb	100	55.419	ENSOCUG00000010396	SSB	99	55.172	Oryctolagus_cuniculus
ENSAPEG00000020395	ssb	100	82.500	ENSORLG00000017208	ssb	100	82.500	Oryzias_latipes
ENSAPEG00000020395	ssb	100	81.796	ENSORLG00020022574	ssb	100	82.045	Oryzias_latipes_hni
ENSAPEG00000020395	ssb	100	83.000	ENSORLG00015016592	ssb	100	83.000	Oryzias_latipes_hsok
ENSAPEG00000020395	ssb	100	83.500	ENSOMEG00000003193	ssb	100	83.250	Oryzias_melastigma
ENSAPEG00000020395	ssb	98	54.822	ENSOGAG00000029768	SSB	92	54.615	Otolemur_garnettii
ENSAPEG00000020395	ssb	100	56.158	ENSOARG00000002906	SSB	98	55.473	Ovis_aries
ENSAPEG00000020395	ssb	89	46.961	ENSPPAG00000006189	-	91	45.304	Pan_paniscus
ENSAPEG00000020395	ssb	100	47.537	ENSPPAG00000032427	-	96	59.677	Pan_paniscus
ENSAPEG00000020395	ssb	100	55.501	ENSPPAG00000042673	SSB	98	55.062	Pan_paniscus
ENSAPEG00000020395	ssb	100	57.248	ENSPPRG00000006599	SSB	98	56.576	Panthera_pardus
ENSAPEG00000020395	ssb	100	57.248	ENSPTIG00000011021	SSB	98	56.174	Panthera_tigris_altaica
ENSAPEG00000020395	ssb	100	55.501	ENSPTRG00000012620	SSB	98	55.062	Pan_troglodytes
ENSAPEG00000020395	ssb	100	45.074	ENSPTRG00000042880	-	99	45.074	Pan_troglodytes
ENSAPEG00000020395	ssb	98	40.369	ENSPANG00000031877	-	87	38.933	Papio_anubis
ENSAPEG00000020395	ssb	100	56.158	ENSPANG00000007440	SSB	98	55.721	Papio_anubis
ENSAPEG00000020395	ssb	99	41.353	ENSPANG00000034126	-	77	45.538	Papio_anubis
ENSAPEG00000020395	ssb	100	71.072	ENSPKIG00000019325	ssb	99	71.072	Paramormyrops_kingsleyae
ENSAPEG00000020395	ssb	100	56.829	ENSPSIG00000002265	SSB	93	57.073	Pelodiscus_sinensis
ENSAPEG00000020395	ssb	91	75.852	ENSPMGG00000020075	ssb	91	75.852	Periophthalmus_magnuspinnatus
ENSAPEG00000020395	ssb	83	46.562	ENSPMAG00000002982	ssb	86	46.505	Petromyzon_marinus
ENSAPEG00000020395	ssb	99	57.179	ENSPCIG00000028591	-	99	56.650	Phascolarctos_cinereus
ENSAPEG00000020395	ssb	100	84.000	ENSPFOG00000009650	ssb	100	84.000	Poecilia_formosa
ENSAPEG00000020395	ssb	100	83.500	ENSPLAG00000020498	ssb	100	84.000	Poecilia_latipinna
ENSAPEG00000020395	ssb	100	83.500	ENSPMEG00000001051	ssb	100	83.500	Poecilia_mexicana
ENSAPEG00000020395	ssb	97	86.828	ENSPREG00000003708	ssb	98	86.595	Poecilia_reticulata
ENSAPEG00000020395	ssb	100	55.911	ENSPPYG00000012919	SSB	98	55.473	Pongo_abelii
ENSAPEG00000020395	ssb	95	55.208	ENSPCAG00000010276	SSB	99	54.948	Procavia_capensis
ENSAPEG00000020395	ssb	100	53.941	ENSPCOG00000015741	-	89	64.286	Propithecus_coquereli
ENSAPEG00000020395	ssb	100	50.493	ENSPCOG00000023189	-	98	49.751	Propithecus_coquereli
ENSAPEG00000020395	ssb	93	59.384	ENSPVAG00000006615	SSB	99	59.384	Pteropus_vampyrus
ENSAPEG00000020395	ssb	100	78.947	ENSPNYG00000006444	ssb	100	78.697	Pundamilia_nyererei
ENSAPEG00000020395	ssb	100	63.325	ENSPNAG00000011708	ssb	100	64.303	Pygocentrus_nattereri
ENSAPEG00000020395	ssb	100	52.289	ENSRNOG00000007998	Ssb	98	51.825	Rattus_norvegicus
ENSAPEG00000020395	ssb	97	54.813	ENSRNOG00000011606	AABR07061825.1	92	54.545	Rattus_norvegicus
ENSAPEG00000020395	ssb	99	40.299	ENSRBIG00000029918	-	98	39.950	Rhinopithecus_bieti
ENSAPEG00000020395	ssb	92	49.858	ENSRBIG00000041232	-	88	57.857	Rhinopithecus_bieti
ENSAPEG00000020395	ssb	86	52.286	ENSRBIG00000041608	-	94	50.000	Rhinopithecus_bieti
ENSAPEG00000020395	ssb	100	49.268	ENSRBIG00000041972	SSB	85	67.568	Rhinopithecus_bieti
ENSAPEG00000020395	ssb	86	54.286	ENSRROG00000034102	-	96	49.874	Rhinopithecus_roxellana
ENSAPEG00000020395	ssb	99	45.274	ENSRROG00000007149	-	98	44.913	Rhinopithecus_roxellana
ENSAPEG00000020395	ssb	100	56.158	ENSRROG00000040346	SSB	98	55.721	Rhinopithecus_roxellana
ENSAPEG00000020395	ssb	98	49.606	ENSRROG00000031684	-	91	58.824	Rhinopithecus_roxellana
ENSAPEG00000020395	ssb	100	56.158	ENSSBOG00000027204	SSB	98	55.721	Saimiri_boliviensis_boliviensis
ENSAPEG00000020395	ssb	100	56.158	ENSSHAG00000018062	SSB	99	56.158	Sarcophilus_harrisii
ENSAPEG00000020395	ssb	100	69.383	ENSSFOG00015000550	ssb	99	69.383	Scleropages_formosus
ENSAPEG00000020395	ssb	96	90.027	ENSSMAG00000013885	ssb	99	90.836	Scophthalmus_maximus
ENSAPEG00000020395	ssb	100	90.704	ENSSDUG00000020117	ssb	100	90.704	Seriola_dumerili
ENSAPEG00000020395	ssb	100	85.930	ENSSLDG00000002525	ssb	100	85.678	Seriola_lalandi_dorsalis
ENSAPEG00000020395	ssb	95	51.302	ENSSARG00000007747	SSB	99	51.302	Sorex_araneus
ENSAPEG00000020395	ssb	100	58.088	ENSSPUG00000012112	SSB	99	58.191	Sphenodon_punctatus
ENSAPEG00000020395	ssb	100	95.312	ENSSPAG00000005696	ssb	100	95.312	Stegastes_partitus
ENSAPEG00000020395	ssb	99	53.906	ENSSSCG00000015938	SSB	94	53.421	Sus_scrofa
ENSAPEG00000020395	ssb	96	58.556	ENSTGUG00000007942	SSB	99	55.012	Taeniopygia_guttata
ENSAPEG00000020395	ssb	100	81.910	ENSTRUG00000017839	ssb	100	81.910	Takifugu_rubripes
ENSAPEG00000020395	ssb	95	81.199	ENSTNIG00000000915	ssb	100	79.837	Tetraodon_nigroviridis
ENSAPEG00000020395	ssb	78	67.826	ENSTBEG00000009056	SSB	74	67.826	Tupaia_belangeri
ENSAPEG00000020395	ssb	100	57.002	ENSTTRG00000002152	SSB	98	56.328	Tursiops_truncatus
ENSAPEG00000020395	ssb	98	58.311	ENSUAMG00000027833	SSB	98	57.600	Ursus_americanus
ENSAPEG00000020395	ssb	100	55.774	ENSUMAG00000013907	SSB	98	55.087	Ursus_maritimus
ENSAPEG00000020395	ssb	100	57.463	ENSVPAG00000007183	SSB	98	56.784	Vicugna_pacos
ENSAPEG00000020395	ssb	100	55.774	ENSVVUG00000016573	SSB	77	55.257	Vulpes_vulpes
ENSAPEG00000020395	ssb	100	55.216	ENSXETG00000025402	ssb	91	55.385	Xenopus_tropicalis
ENSAPEG00000020395	ssb	97	80.914	ENSXCOG00000019109	ssb	97	80.914	Xiphophorus_couchianus
ENSAPEG00000020395	ssb	100	80.149	ENSXMAG00000004888	ssb	100	80.149	Xiphophorus_maculatus