EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000020449 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 5663 bases
Position: chr6:17782828-17788490
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000028779	RNA_pol_Rpb1_5	PF04998.17	7.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000029539	-	378	-	ENSAPEP00000028779	125 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000020449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000020449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000020449	-	78	95.918	ENSAPEG00000024794	-	75	95.918
ENSAPEG00000020449	-	99	80.645	ENSAPEG00000011670	-	83	80.645
ENSAPEG00000020449	-	77	95.833	ENSAPEG00000004431	-	61	95.833
ENSAPEG00000020449	-	95	87.597	ENSAPEG00000004262	-	74	87.597
ENSAPEG00000020449	-	89	97.297	ENSAPEG00000004479	-	97	97.297
ENSAPEG00000020449	-	77	95.833	ENSAPEG00000001594	-	61	95.833
ENSAPEG00000020449	-	77	95.833	ENSAPEG00000021935	-	61	95.833
ENSAPEG00000020449	-	89	98.198	ENSAPEG00000019224	-	97	98.198
ENSAPEG00000020449	-	77	95.833	ENSAPEG00000004452	-	61	95.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000020449	-	95	80.620	ENSG00000148606	POLR3A	80	80.620	Homo_sapiens
ENSAPEG00000020449	-	97	86.260	ENSAPOG00000017553	-	78	86.260	Acanthochromis_polyacanthus
ENSAPEG00000020449	-	99	87.903	ENSAOCG00000011392	-	99	87.903	Amphiprion_ocellaris
ENSAPEG00000020449	-	77	94.792	ENSAOCG00000011482	-	75	94.792	Amphiprion_ocellaris
ENSAPEG00000020449	-	89	97.297	ENSAOCG00000019295	-	97	97.297	Amphiprion_ocellaris
ENSAPEG00000020449	-	100	97.600	ENSAOCG00000021484	-	100	97.600	Amphiprion_ocellaris
ENSAPEG00000020449	-	77	94.792	ENSAOCG00000004721	-	74	94.792	Amphiprion_ocellaris
ENSAPEG00000020449	-	95	80.620	ENSANAG00000028922	POLR3A	79	80.620	Aotus_nancymaae
ENSAPEG00000020449	-	95	80.620	ENSCJAG00000001015	POLR3A	79	80.620	Callithrix_jacchus
ENSAPEG00000020449	-	97	79.389	ENSCAFG00020014711	POLR3A	59	79.389	Canis_lupus_dingo
ENSAPEG00000020449	-	95	80.620	ENSCCAG00000032995	POLR3A	79	80.620	Cebus_capucinus
ENSAPEG00000020449	-	95	80.620	ENSCATG00000035842	POLR3A	80	80.620	Cercocebus_atys
ENSAPEG00000020449	-	97	78.626	ENSCANG00000041071	POLR3A	80	79.845	Colobus_angolensis_palliatus
ENSAPEG00000020449	-	87	77.982	ENSCGRG00001005169	-	80	77.982	Cricetulus_griseus_chok1gshd
ENSAPEG00000020449	-	95	80.620	ENSGGOG00000027729	POLR3A	80	80.620	Gorilla_gorilla
ENSAPEG00000020449	-	95	81.395	ENSIPUG00000001736	-	81	81.395	Ictalurus_punctatus
ENSAPEG00000020449	-	97	78.626	ENSJJAG00000006291	-	75	78.626	Jaculus_jaculus
ENSAPEG00000020449	-	95	80.620	ENSMFAG00000032218	POLR3A	79	80.620	Macaca_fascicularis
ENSAPEG00000020449	-	95	80.620	ENSMMUG00000005514	POLR3A	80	80.620	Macaca_mulatta
ENSAPEG00000020449	-	95	80.620	ENSMLEG00000030014	POLR3A	80	80.620	Mandrillus_leucophaeus
ENSAPEG00000020449	-	97	79.389	ENSMICG00000005937	POLR3A	75	79.389	Microcebus_murinus
ENSAPEG00000020449	-	97	79.389	ENSPPAG00000031986	-	80	80.620	Pan_paniscus
ENSAPEG00000020449	-	95	80.620	ENSPTRG00000002664	POLR3A	80	80.620	Pan_troglodytes
ENSAPEG00000020449	-	95	80.620	ENSPANG00000022508	POLR3A	80	80.620	Papio_anubis
ENSAPEG00000020449	-	97	80.916	ENSPMGG00000015856	-	80	80.916	Periophthalmus_magnuspinnatus
ENSAPEG00000020449	-	97	79.389	ENSPCOG00000028311	POLR3A	69	79.389	Propithecus_coquereli
ENSAPEG00000020449	-	95	80.620	ENSRBIG00000034967	POLR3A	80	80.620	Rhinopithecus_bieti
ENSAPEG00000020449	-	95	80.620	ENSRROG00000025527	POLR3A	80	80.620	Rhinopithecus_roxellana
ENSAPEG00000020449	-	95	80.620	ENSSBOG00000022199	POLR3A	77	80.620	Saimiri_boliviensis_boliviensis