EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000020746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8119 bases
Position: chr6:18083319-18091437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000029221	RRM_1	PF00076.22	1.1e-29	1	2
ENSAPEP00000029221	RRM_1	PF00076.22	1.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000030003	-	852	-	ENSAPEP00000029221	283 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000020746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000020746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000020746	-	60	41.143	ENSAPEG00000011908	srsf9	74	40.206
ENSAPEG00000020746	-	96	50.730	ENSAPEG00000007830	srsf5b	98	51.370
ENSAPEG00000020746	-	64	62.778	ENSAPEG00000009297	srsf5a	61	65.027
ENSAPEG00000020746	-	65	83.684	ENSAPEG00000013086	-	55	83.163
ENSAPEG00000020746	-	59	40.230	ENSAPEG00000009915	-	78	40.722
ENSAPEG00000020746	-	59	41.379	ENSAPEG00000023352	-	75	40.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000020746	-	66	79.787	ENSG00000124193	SRSF6	63	84.706	Homo_sapiens
ENSAPEG00000020746	-	66	65.608	ENSAMEG00000003710	SRSF6	54	67.539	Ailuropoda_melanoleuca
ENSAPEG00000020746	-	98	63.907	ENSACIG00000023658	-	85	68.727	Amphilophus_citrinellus
ENSAPEG00000020746	-	100	77.199	ENSACIG00000020091	-	95	90.076	Amphilophus_citrinellus
ENSAPEG00000020746	-	100	82.555	ENSAOCG00000004309	-	100	81.931	Amphiprion_ocellaris
ENSAPEG00000020746	-	94	73.134	ENSATEG00000007255	-	72	88.770	Anabas_testudineus
ENSAPEG00000020746	-	65	80.978	ENSACAG00000002061	SRSF6	53	81.053	Anolis_carolinensis
ENSAPEG00000020746	-	65	84.946	ENSAMXG00000003101	-	50	84.656	Astyanax_mexicanus
ENSAPEG00000020746	-	65	81.720	ENSAMXG00000042692	-	96	81.481	Astyanax_mexicanus
ENSAPEG00000020746	-	66	80.319	ENSBTAG00000008527	SRSF6	63	85.882	Bos_taurus
ENSAPEG00000020746	-	66	79.787	ENSCJAG00000048403	SRSF6	69	82.105	Callithrix_jacchus
ENSAPEG00000020746	-	66	80.319	ENSCAFG00000009289	SRSF6	63	85.882	Canis_familiaris
ENSAPEG00000020746	-	66	80.319	ENSCAFG00020013559	SRSF6	63	85.882	Canis_lupus_dingo
ENSAPEG00000020746	-	66	80.319	ENSCHIG00000015890	-	63	85.882	Capra_hircus
ENSAPEG00000020746	-	66	79.787	ENSCHIG00000009148	-	66	71.179	Capra_hircus
ENSAPEG00000020746	-	66	60.106	ENSTSYG00000026476	SRSF6	60	55.066	Carlito_syrichta
ENSAPEG00000020746	-	65	75.135	ENSCPOG00000011761	SRSF6	63	84.706	Cavia_porcellus
ENSAPEG00000020746	-	66	79.787	ENSCATG00000030794	SRSF6	63	84.706	Cercocebus_atys
ENSAPEG00000020746	-	66	79.787	ENSCLAG00000010247	SRSF6	63	84.706	Chinchilla_lanigera
ENSAPEG00000020746	-	66	79.787	ENSCSAG00000014022	SRSF6	69	72.083	Chlorocebus_sabaeus
ENSAPEG00000020746	-	65	83.422	ENSCPBG00000018200	SRSF6	55	82.632	Chrysemys_picta_bellii
ENSAPEG00000020746	-	66	78.723	ENSCANG00000037774	-	66	70.306	Colobus_angolensis_palliatus
ENSAPEG00000020746	-	66	60.106	ENSCANG00000042529	-	60	53.304	Colobus_angolensis_palliatus
ENSAPEG00000020746	-	66	79.787	ENSCGRG00001022339	Srsf6	63	84.706	Cricetulus_griseus_chok1gshd
ENSAPEG00000020746	-	65	82.353	ENSDARG00000016783	srsf6b	95	83.333	Danio_rerio
ENSAPEG00000020746	-	66	79.787	ENSDNOG00000008410	SRSF6	54	82.105	Dasypus_novemcinctus
ENSAPEG00000020746	-	66	79.787	ENSDORG00000028378	Srsf6	63	84.706	Dipodomys_ordii
ENSAPEG00000020746	-	66	77.660	ENSETEG00000006221	SRSF6	69	69.038	Echinops_telfairi
ENSAPEG00000020746	-	66	80.319	ENSEASG00005023429	SRSF6	54	82.632	Equus_asinus_asinus
ENSAPEG00000020746	-	66	80.319	ENSECAG00000023932	SRSF6	58	82.632	Equus_caballus
ENSAPEG00000020746	-	100	63.051	ENSELUG00000013506	SRSF6	81	85.714	Esox_lucius
ENSAPEG00000020746	-	65	85.638	ENSELUG00000024182	SRSF6	86	89.773	Esox_lucius
ENSAPEG00000020746	-	66	80.319	ENSFCAG00000032814	SRSF6	54	82.632	Felis_catus
ENSAPEG00000020746	-	66	60.106	ENSFDAG00000012191	SRSF6	60	53.304	Fukomys_damarensis
ENSAPEG00000020746	-	65	83.152	ENSFHEG00000023065	srsf6a	56	82.632	Fundulus_heteroclitus
ENSAPEG00000020746	-	64	84.615	ENSGMOG00000014458	srsf6a	53	80.203	Gadus_morhua
ENSAPEG00000020746	-	64	69.444	ENSGMOG00000006105	srsf6a	62	69.444	Gadus_morhua
ENSAPEG00000020746	-	65	82.353	ENSGALG00000000990	SRSF6	63	83.529	Gallus_gallus
ENSAPEG00000020746	-	66	80.645	ENSGACG00000006084	srsf6a	63	75.000	Gasterosteus_aculeatus
ENSAPEG00000020746	-	65	83.422	ENSGAGG00000003238	SRSF6	55	82.632	Gopherus_agassizii
ENSAPEG00000020746	-	66	79.787	ENSGGOG00000009808	SRSF6	63	84.706	Gorilla_gorilla
ENSAPEG00000020746	-	84	83.264	ENSHBUG00000006386	-	100	76.730	Haplochromis_burtoni
ENSAPEG00000020746	-	66	79.787	ENSHGLG00000007348	SRSF6	63	84.706	Heterocephalus_glaber_female
ENSAPEG00000020746	-	68	63.265	ENSHGLG00000007701	-	58	63.021	Heterocephalus_glaber_female
ENSAPEG00000020746	-	66	60.106	ENSHGLG00100005043	SRSF6	60	53.304	Heterocephalus_glaber_male
ENSAPEG00000020746	-	65	79.891	ENSHCOG00000002740	srsf6a	59	80.000	Hippocampus_comes
ENSAPEG00000020746	-	65	83.243	ENSIPUG00000004776	-	65	84.211	Ictalurus_punctatus
ENSAPEG00000020746	-	66	79.787	ENSSTOG00000010866	SRSF6	63	84.706	Ictidomys_tridecemlineatus
ENSAPEG00000020746	-	99	65.157	ENSKMAG00000011934	srsf6a	60	80.319	Kryptolebias_marmoratus
ENSAPEG00000020746	-	65	80.978	ENSLBEG00000007356	srsf6a	53	80.612	Labrus_bergylta
ENSAPEG00000020746	-	90	65.646	ENSLACG00000005466	SRSF6	56	83.333	Latimeria_chalumnae
ENSAPEG00000020746	-	66	79.787	ENSMFAG00000036925	SRSF6	63	84.706	Macaca_fascicularis
ENSAPEG00000020746	-	66	79.787	ENSMMUG00000006742	SRSF6	63	84.706	Macaca_mulatta
ENSAPEG00000020746	-	74	68.722	ENSMNEG00000038270	-	66	70.742	Macaca_nemestrina
ENSAPEG00000020746	-	66	79.255	ENSMNEG00000027392	-	63	83.529	Macaca_nemestrina
ENSAPEG00000020746	-	65	83.158	ENSMAMG00000017161	srsf6a	55	82.143	Mastacembelus_armatus
ENSAPEG00000020746	-	84	78.750	ENSMZEG00005008032	-	100	70.405	Maylandia_zebra
ENSAPEG00000020746	-	64	80.220	ENSMZEG00005020658	-	60	80.220	Maylandia_zebra
ENSAPEG00000020746	-	66	79.255	ENSMICG00000008537	SRSF6	63	84.706	Microcebus_murinus
ENSAPEG00000020746	-	65	81.622	ENSMODG00000003107	SRSF6	55	81.579	Monodelphis_domestica
ENSAPEG00000020746	-	66	79.787	ENSMUSG00000016921	Srsf6	63	84.706	Mus_musculus
ENSAPEG00000020746	-	66	79.787	MGP_SPRETEiJ_G0025528	Srsf6	63	84.706	Mus_spretus
ENSAPEG00000020746	-	66	80.319	ENSMPUG00000017692	SRSF6	65	82.632	Mustela_putorius_furo
ENSAPEG00000020746	-	66	61.170	ENSMLUG00000016618	SRSF6	66	53.744	Myotis_lucifugus
ENSAPEG00000020746	-	66	79.787	ENSNGAG00000017560	Srsf6	63	84.706	Nannospalax_galili
ENSAPEG00000020746	-	64	82.979	ENSNBRG00000001846	-	62	76.856	Neolamprologus_brichardi
ENSAPEG00000020746	-	65	94.022	ENSNBRG00000014709	-	100	77.044	Neolamprologus_brichardi
ENSAPEG00000020746	-	66	79.787	ENSNLEG00000006524	SRSF6	63	84.706	Nomascus_leucogenys
ENSAPEG00000020746	-	65	81.622	ENSMEUG00000014615	SRSF6	62	81.579	Notamacropus_eugenii
ENSAPEG00000020746	-	64	83.060	ENSONIG00000001925	-	54	84.375	Oreochromis_niloticus
ENSAPEG00000020746	-	84	76.426	ENSONIG00000020247	-	58	91.542	Oreochromis_niloticus
ENSAPEG00000020746	-	66	65.128	ENSOCUG00000009785	-	94	51.228	Oryctolagus_cuniculus
ENSAPEG00000020746	-	64	48.889	ENSOCUG00000023999	-	70	52.778	Oryctolagus_cuniculus
ENSAPEG00000020746	-	65	73.913	ENSORLG00000003530	srsf6a	58	48.148	Oryzias_latipes
ENSAPEG00000020746	-	55	66.667	ENSORLG00020017506	srsf6a	90	69.231	Oryzias_latipes_hni
ENSAPEG00000020746	-	65	73.370	ENSORLG00015009410	srsf6a	58	48.148	Oryzias_latipes_hsok
ENSAPEG00000020746	-	66	79.255	ENSOGAG00000014468	SRSF6	54	81.579	Otolemur_garnettii
ENSAPEG00000020746	-	66	78.191	ENSOARG00000003117	SRSF6	65	68.398	Ovis_aries
ENSAPEG00000020746	-	65	67.027	ENSPPAG00000043131	-	75	61.250	Pan_paniscus
ENSAPEG00000020746	-	66	79.255	ENSPPAG00000034327	-	66	70.742	Pan_paniscus
ENSAPEG00000020746	-	66	80.319	ENSPPRG00000008917	SRSF6	54	82.632	Panthera_pardus
ENSAPEG00000020746	-	65	67.027	ENSPTRG00000046274	-	75	61.250	Pan_troglodytes
ENSAPEG00000020746	-	66	79.787	ENSPTRG00000044686	-	63	84.706	Pan_troglodytes
ENSAPEG00000020746	-	66	79.787	ENSPANG00000035224	SRSF6	63	84.706	Papio_anubis
ENSAPEG00000020746	-	63	72.067	ENSPKIG00000015703	-	83	68.103	Paramormyrops_kingsleyae
ENSAPEG00000020746	-	97	68.978	ENSPKIG00000018463	-	83	86.905	Paramormyrops_kingsleyae
ENSAPEG00000020746	-	100	60.778	ENSPMGG00000014963	srsf6a	77	68.726	Periophthalmus_magnuspinnatus
ENSAPEG00000020746	-	65	81.622	ENSPCIG00000003820	SRSF6	63	84.706	Phascolarctos_cinereus
ENSAPEG00000020746	-	65	84.483	ENSPFOG00000006437	srsf6a	53	79.487	Poecilia_formosa
ENSAPEG00000020746	-	96	57.485	ENSPLAG00000009243	srsf6a	80	80.153	Poecilia_latipinna
ENSAPEG00000020746	-	96	60.923	ENSPMEG00000006042	SRSF6	55	81.122	Poecilia_mexicana
ENSAPEG00000020746	-	66	79.787	ENSPPYG00000011019	SRSF6	66	71.179	Pongo_abelii
ENSAPEG00000020746	-	75	73.460	ENSPCAG00000010954	SRSF6	74	68.400	Procavia_capensis
ENSAPEG00000020746	-	66	79.255	ENSPCOG00000026364	SRSF6	63	84.706	Propithecus_coquereli
ENSAPEG00000020746	-	66	79.787	ENSPVAG00000015232	SRSF6	66	71.179	Pteropus_vampyrus
ENSAPEG00000020746	-	65	94.022	ENSPNYG00000004944	-	100	76.730	Pundamilia_nyererei
ENSAPEG00000020746	-	64	82.979	ENSPNYG00000011272	-	52	82.143	Pundamilia_nyererei
ENSAPEG00000020746	-	66	79.787	ENSRNOG00000006380	Srsf6	67	71.179	Rattus_norvegicus
ENSAPEG00000020746	-	66	79.787	ENSRBIG00000041414	SRSF6	62	86.250	Rhinopithecus_bieti
ENSAPEG00000020746	-	66	79.787	ENSRROG00000029989	SRSF6	63	84.706	Rhinopithecus_roxellana
ENSAPEG00000020746	-	64	68.478	ENSSBOG00000034078	-	54	67.935	Saimiri_boliviensis_boliviensis
ENSAPEG00000020746	-	65	81.622	ENSSHAG00000012805	SRSF6	55	81.579	Sarcophilus_harrisii
ENSAPEG00000020746	-	64	84.615	ENSSFOG00015015169	SRSF6	61	84.211	Scleropages_formosus
ENSAPEG00000020746	-	89	82.383	ENSSFOG00015019681	-	53	82.902	Scleropages_formosus
ENSAPEG00000020746	-	75	75.319	ENSSMAG00000017447	-	57	87.500	Scophthalmus_maximus
ENSAPEG00000020746	-	59	67.039	ENSSMAG00000014819	-	69	62.209	Scophthalmus_maximus
ENSAPEG00000020746	-	65	83.158	ENSSDUG00000016097	srsf6a	55	82.653	Seriola_dumerili
ENSAPEG00000020746	-	65	83.158	ENSSLDG00000022841	srsf6a	55	82.653	Seriola_lalandi_dorsalis
ENSAPEG00000020746	-	99	65.845	ENSSPAG00000002362	srsf6a	69	82.653	Stegastes_partitus
ENSAPEG00000020746	-	66	80.319	ENSSSCG00000007362	SRSF6	62	82.632	Sus_scrofa
ENSAPEG00000020746	-	65	83.152	ENSTGUG00000003455	SRSF6	54	82.632	Taeniopygia_guttata
ENSAPEG00000020746	-	96	62.903	ENSTNIG00000001692	srsf6a	71	73.840	Tetraodon_nigroviridis
ENSAPEG00000020746	-	55	72.258	ENSTBEG00000013448	SRSF6	62	63.776	Tupaia_belangeri
ENSAPEG00000020746	-	66	80.319	ENSUAMG00000003559	SRSF6	63	85.882	Ursus_americanus
ENSAPEG00000020746	-	65	80.978	ENSXMAG00000021849	srsf6a	56	81.579	Xiphophorus_maculatus