EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000020870 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 2644 bases
Position: chr17:33293145-33295788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000029354	RRM_1	PF00076.22	7.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000030143	-	406	-	ENSAPEP00000029354	129 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000020870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000020870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000020870	-	58	32.927	ENSAPEG00000021452	-	67	36.620
ENSAPEG00000020870	-	57	41.026	ENSAPEG00000018802	srsf7b	52	40.000
ENSAPEG00000020870	-	57	44.737	ENSAPEG00000014876	srsf3b	55	46.377
ENSAPEG00000020870	-	57	43.421	ENSAPEG00000013125	-	55	44.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000020870	-	64	98.780	ENSACIG00000018649	srsf4	69	98.780	Amphilophus_citrinellus
ENSAPEG00000020870	-	67	98.851	ENSAOCG00000005997	srsf4	50	98.851	Amphiprion_ocellaris
ENSAPEG00000020870	-	64	98.780	ENSACLG00000003395	srsf4	68	98.780	Astatotilapia_calliptera
ENSAPEG00000020870	-	67	87.209	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSAPEG00000020870	-	64	100.000	ENSCSEG00000010058	srsf4	51	96.341	Cynoglossus_semilaevis
ENSAPEG00000020870	-	71	83.516	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSAPEG00000020870	-	57	67.568	FBgn0004587	B52	52	68.571	Drosophila_melanogaster
ENSAPEG00000020870	-	65	98.810	ENSFHEG00000007472	srsf4	91	97.647	Fundulus_heteroclitus
ENSAPEG00000020870	-	71	82.243	ENSHBUG00000016897	-	97	82.243	Haplochromis_burtoni
ENSAPEG00000020870	-	64	100.000	ENSLBEG00000017163	-	76	100.000	Labrus_bergylta
ENSAPEG00000020870	-	67	98.837	ENSMAMG00000004888	srsf4	50	98.837	Mastacembelus_armatus
ENSAPEG00000020870	-	64	98.780	ENSMZEG00005026275	srsf4	68	98.780	Maylandia_zebra
ENSAPEG00000020870	-	71	81.481	ENSMZEG00005025078	-	97	81.481	Maylandia_zebra
ENSAPEG00000020870	-	65	71.429	ENSMALG00000010062	-	76	76.056	Monopterus_albus
ENSAPEG00000020870	-	71	84.615	ENSNBRG00000014840	-	97	84.615	Neolamprologus_brichardi
ENSAPEG00000020870	-	64	100.000	ENSORLG00000028783	-	75	100.000	Oryzias_latipes
ENSAPEG00000020870	-	64	97.561	ENSPMGG00000013436	srsf4	61	97.561	Periophthalmus_magnuspinnatus
ENSAPEG00000020870	-	65	95.238	ENSSFOG00015020292	srsf4	66	97.183	Scleropages_formosus
ENSAPEG00000020870	-	67	79.545	ENSSPUG00000019124	-	80	84.507	Sphenodon_punctatus
ENSAPEG00000020870	-	72	92.473	ENSSPAG00000014538	srsf4	74	98.765	Stegastes_partitus
ENSAPEG00000020870	-	67	96.552	ENSXCOG00000018826	srsf4	66	96.552	Xiphophorus_couchianus
ENSAPEG00000020870	-	64	98.795	ENSXMAG00000021549	-	70	98.795	Xiphophorus_maculatus