EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000021167 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
9183 bases
Position
chr18:14974877-14984059
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000029853CPSF73-100_CPF11718.86e-5211
ENSAPEP00000029813CPSF73-100_CPF11718.89.4e-4711
ENSAPEP00000029884CPSF73-100_CPF11718.82.4e-4511
ENSAPEP00000029813Beta-CaspPF10996.88.1e-3411
ENSAPEP00000029884Beta-CaspPF10996.88.1e-3411
ENSAPEP00000029853Beta-CaspPF10996.88.2e-3411
ENSAPEP00000029813Lactamase_BPF00753.271.5e-1811
ENSAPEP00000029853Lactamase_BPF00753.271.5e-1811
ENSAPEP00000029884Lactamase_BPF00753.273.6e-0811
ENSAPEP00000029884RMMBLPF07521.125.2e-2111
ENSAPEP00000029813RMMBLPF07521.125.8e-2111
ENSAPEP00000029853RMMBLPF07521.126e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000030684CPSF3 (1 of many)-2031881-ENSAPEP00000029884626 (aa)--
ENSAPET00000030613CPSF3 (1 of many)-2014962-ENSAPEP00000029813675 (aa)--
ENSAPET00000030653CPSF3 (1 of many)-2024866-ENSAPEP00000029853690 (aa)-UPI000C31320A
Gene Model
Click here to download ENSAPEG00000021167's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021167's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000021167CPSF310087.971ENSAPEG00000019526cpsf39989.362
ENSAPEG00000021167CPSF38632.907ENSAPEG00000024732ints118832.907
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000021167CPSF39887.941ENSG00000119203CPSF3100100.000Homo_sapiens
ENSAPEG00000021167CPSF37599.804ENSAPOG00000012241CPSF39199.804Acanthochromis_polyacanthus
ENSAPEG00000021167CPSF310087.971ENSAPOG00000022087cpsf310087.971Acanthochromis_polyacanthus
ENSAPEG00000021167CPSF39888.235ENSAMEG00000008493CPSF39988.235Ailuropoda_melanoleuca
ENSAPEG00000021167CPSF310092.936ENSACIG00000023663CPSF310092.936Amphilophus_citrinellus
ENSAPEG00000021167CPSF39986.414ENSACIG00000009846cpsf39986.414Amphilophus_citrinellus
ENSAPEG00000021167CPSF3100100.000ENSAOCG00000010077CPSF3100100.000Amphiprion_ocellaris
ENSAPEG00000021167CPSF310087.826ENSAOCG00000022056cpsf310089.650Amphiprion_ocellaris
ENSAPEG00000021167CPSF39988.663ENSATEG00000003959cpsf39988.663Anabas_testudineus
ENSAPEG00000021167CPSF310090.290ENSATEG00000014525CPSF310090.290Anabas_testudineus
ENSAPEG00000021167CPSF39787.779ENSAPLG00000006941CPSF39887.779Anas_platyrhynchos
ENSAPEG00000021167CPSF39982.233ENSACAG00000001759CPSF39985.197Anolis_carolinensis
ENSAPEG00000021167CPSF39882.353ENSANAG00000031254CPSF39982.759Aotus_nancymaae
ENSAPEG00000021167CPSF39986.699ENSACLG00000014484cpsf39989.006Astatotilapia_calliptera
ENSAPEG00000021167CPSF39896.355ENSACLG00000018846CPSF310093.093Astatotilapia_calliptera
ENSAPEG00000021167CPSF310089.565ENSAMXG00000004786cpsf310089.565Astyanax_mexicanus
ENSAPEG00000021167CPSF39888.235ENSBTAG00000019735CPSF39988.235Bos_taurus
ENSAPEG00000021167CPSF39157.911WBGene00013460cpsf-38957.911Caenorhabditis_elegans
ENSAPEG00000021167CPSF39887.794ENSCJAG00000006276CPSF39987.794Callithrix_jacchus
ENSAPEG00000021167CPSF39888.235ENSCAFG00000003375CPSF39588.235Canis_familiaris
ENSAPEG00000021167CPSF39191.071ENSCAFG00020026799CPSF39991.071Canis_lupus_dingo
ENSAPEG00000021167CPSF39888.235ENSCHIG00000013973CPSF39988.235Capra_hircus
ENSAPEG00000021167CPSF39887.941ENSTSYG00000002967CPSF39987.941Carlito_syrichta
ENSAPEG00000021167CPSF39985.238ENSCAPG00000013851CPSF39987.988Cavia_aperea
ENSAPEG00000021167CPSF39888.088ENSCPOG00000011299CPSF39988.088Cavia_porcellus
ENSAPEG00000021167CPSF39887.794ENSCCAG00000036730CPSF39987.794Cebus_capucinus
ENSAPEG00000021167CPSF39886.176ENSCATG00000014770CPSF39993.599Cercocebus_atys
ENSAPEG00000021167CPSF39887.941ENSCLAG00000002727CPSF39987.941Chinchilla_lanigera
ENSAPEG00000021167CPSF39880.000ENSCSAG00000007125CPSF39980.000Chlorocebus_sabaeus
ENSAPEG00000021167CPSF385100.000ENSCHOG00000000180CPSF38563.093Choloepus_hoffmanni
ENSAPEG00000021167CPSF39987.246ENSCPBG00000014074CPSF39987.246Chrysemys_picta_bellii
ENSAPEG00000021167CPSF39868.082ENSCING00000007214-9868.082Ciona_intestinalis
ENSAPEG00000021167CPSF39877.664ENSCANG00000034435CPSF39977.664Colobus_angolensis_palliatus
ENSAPEG00000021167CPSF39887.941ENSCGRG00001013134Cpsf39987.941Cricetulus_griseus_chok1gshd
ENSAPEG00000021167CPSF39887.941ENSCGRG00000018319Cpsf39987.941Cricetulus_griseus_crigri
ENSAPEG00000021167CPSF310093.343ENSCSEG00000002021CPSF310093.663Cynoglossus_semilaevis
ENSAPEG00000021167CPSF310096.377ENSCVAG00000015067CPSF310096.377Cyprinodon_variegatus
ENSAPEG00000021167CPSF310090.145ENSDARG00000027649cpsf310090.145Danio_rerio
ENSAPEG00000021167CPSF39887.078ENSDNOG00000008940CPSF39587.078Dasypus_novemcinctus
ENSAPEG00000021167CPSF39688.889ENSDORG00000014263Cpsf39988.889Dipodomys_ordii
ENSAPEG00000021167CPSF39966.327FBgn0261065Cpsf739966.327Drosophila_melanogaster
ENSAPEG00000021167CPSF39676.852ENSETEG00000003893CPSF39976.852Echinops_telfairi
ENSAPEG00000021167CPSF39779.666ENSEBUG00000009018cpsf39976.197Eptatretus_burgeri
ENSAPEG00000021167CPSF39888.235ENSEASG00005003970CPSF39988.235Equus_asinus_asinus
ENSAPEG00000021167CPSF39888.235ENSECAG00000019911CPSF39693.243Equus_caballus
ENSAPEG00000021167CPSF39872.941ENSEEUG00000015422CPSF39972.941Erinaceus_europaeus
ENSAPEG00000021167CPSF39991.424ENSELUG00000013775cpsf39991.424Esox_lucius
ENSAPEG00000021167CPSF39888.235ENSFCAG00000007852CPSF39988.235Felis_catus
ENSAPEG00000021167CPSF39984.444ENSFALG00000006572CPSF39987.616Ficedula_albicollis
ENSAPEG00000021167CPSF39887.334ENSFDAG00000006317CPSF39987.334Fukomys_damarensis
ENSAPEG00000021167CPSF39986.483ENSFHEG00000014774cpsf39986.483Fundulus_heteroclitus
ENSAPEG00000021167CPSF35980.000ENSFHEG00000012186CPSF310080.000Fundulus_heteroclitus
ENSAPEG00000021167CPSF310089.130ENSGMOG00000003157cpsf310089.130Gadus_morhua
ENSAPEG00000021167CPSF39986.919ENSGALG00000016424CPSF39986.919Gallus_gallus
ENSAPEG00000021167CPSF310095.797ENSGAFG00000008016CPSF310095.797Gambusia_affinis
ENSAPEG00000021167CPSF39985.669ENSGAFG00000019449cpsf39985.669Gambusia_affinis
ENSAPEG00000021167CPSF37381.370ENSGAGG00000025583CPSF39383.298Gopherus_agassizii
ENSAPEG00000021167CPSF39985.079ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSAPEG00000021167CPSF36393.035ENSHBUG00000014332CPSF310093.035Haplochromis_burtoni
ENSAPEG00000021167CPSF39988.808ENSHBUG00000001188cpsf39988.808Haplochromis_burtoni
ENSAPEG00000021167CPSF39887.629ENSHGLG00000000666CPSF39887.629Heterocephalus_glaber_female
ENSAPEG00000021167CPSF39887.629ENSHGLG00100007765CPSF39887.629Heterocephalus_glaber_male
ENSAPEG00000021167CPSF39987.083ENSHCOG00000007251cpsf39987.083Hippocampus_comes
ENSAPEG00000021167CPSF39994.630ENSHCOG00000015957CPSF39994.630Hippocampus_comes
ENSAPEG00000021167CPSF310089.565ENSIPUG00000023488cpsf310089.565Ictalurus_punctatus
ENSAPEG00000021167CPSF39888.088ENSSTOG00000004476CPSF39988.088Ictidomys_tridecemlineatus
ENSAPEG00000021167CPSF39887.647ENSJJAG00000023415Cpsf39987.647Jaculus_jaculus
ENSAPEG00000021167CPSF310097.826ENSKMAG00000007317CPSF310097.826Kryptolebias_marmoratus
ENSAPEG00000021167CPSF310086.812ENSKMAG00000002806cpsf310086.812Kryptolebias_marmoratus
ENSAPEG00000021167CPSF39982.267ENSLBEG00000020569cpsf39682.267Labrus_bergylta
ENSAPEG00000021167CPSF39897.277ENSLBEG00000013492CPSF310097.277Labrus_bergylta
ENSAPEG00000021167CPSF35982.258ENSLBEG00000015018-9982.842Labrus_bergylta
ENSAPEG00000021167CPSF310080.608ENSLACG00000008308CPSF310080.608Latimeria_chalumnae
ENSAPEG00000021167CPSF310090.188ENSLOCG00000016823cpsf310090.188Lepisosteus_oculatus
ENSAPEG00000021167CPSF39886.745ENSLAFG00000009467CPSF39986.745Loxodonta_africana
ENSAPEG00000021167CPSF39887.794ENSMFAG00000001339CPSF39495.208Macaca_fascicularis
ENSAPEG00000021167CPSF39984.921ENSMMUG00000018038CPSF39295.208Macaca_mulatta
ENSAPEG00000021167CPSF39993.500ENSMNEG00000039447CPSF39998.000Macaca_nemestrina
ENSAPEG00000021167CPSF39887.941ENSMLEG00000026825CPSF39297.854Mandrillus_leucophaeus
ENSAPEG00000021167CPSF310094.304ENSMAMG00000008835CPSF310094.304Mastacembelus_armatus
ENSAPEG00000021167CPSF39988.227ENSMAMG00000003076cpsf39988.227Mastacembelus_armatus
ENSAPEG00000021167CPSF39988.808ENSMZEG00005014358cpsf39988.808Maylandia_zebra
ENSAPEG00000021167CPSF310097.681ENSMZEG00005006258CPSF310097.681Maylandia_zebra
ENSAPEG00000021167CPSF39687.387ENSMGAG00000013995CPSF39987.387Meleagris_gallopavo
ENSAPEG00000021167CPSF35877.333ENSMAUG00000000166Cpsf39978.667Mesocricetus_auratus
ENSAPEG00000021167CPSF39883.063ENSMICG00000002363CPSF39983.063Microcebus_murinus
ENSAPEG00000021167CPSF39885.000ENSMOCG00000020067Cpsf39490.732Microtus_ochrogaster
ENSAPEG00000021167CPSF39982.524ENSMMOG00000018212CPSF39883.851Mola_mola
ENSAPEG00000021167CPSF37881.560ENSMMOG00000011923CPSF38581.560Mola_mola
ENSAPEG00000021167CPSF39886.900ENSMODG00000014703CPSF39986.900Monodelphis_domestica
ENSAPEG00000021167CPSF310088.551ENSMALG00000016416cpsf310088.551Monopterus_albus
ENSAPEG00000021167CPSF39691.475ENSMALG00000011474CPSF310091.420Monopterus_albus
ENSAPEG00000021167CPSF39887.647MGP_CAROLIEiJ_G0017640Cpsf39987.647Mus_caroli
ENSAPEG00000021167CPSF39887.647ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSAPEG00000021167CPSF39887.500MGP_PahariEiJ_G0029397Cpsf39987.500Mus_pahari
ENSAPEG00000021167CPSF39887.647MGP_SPRETEiJ_G0018481Cpsf39987.647Mus_spretus
ENSAPEG00000021167CPSF39888.218ENSMPUG00000013213CPSF39988.218Mustela_putorius_furo
ENSAPEG00000021167CPSF39888.106ENSMLUG00000010636CPSF39988.106Myotis_lucifugus
ENSAPEG00000021167CPSF39887.794ENSNGAG00000019836Cpsf39987.794Nannospalax_galili
ENSAPEG00000021167CPSF39896.355ENSNBRG00000010525CPSF310093.093Neolamprologus_brichardi
ENSAPEG00000021167CPSF39988.372ENSNBRG00000004770cpsf39988.372Neolamprologus_brichardi
ENSAPEG00000021167CPSF39887.794ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSAPEG00000021167CPSF39857.353ENSMEUG00000013117-9957.353Notamacropus_eugenii
ENSAPEG00000021167CPSF39879.381ENSOPRG00000008902CPSF39979.381Ochotona_princeps
ENSAPEG00000021167CPSF39888.088ENSODEG00000003129CPSF39988.088Octodon_degus
ENSAPEG00000021167CPSF39988.808ENSONIG00000018812cpsf39988.808Oreochromis_niloticus
ENSAPEG00000021167CPSF38884.369ENSOANG00000008577CPSF39985.968Ornithorhynchus_anatinus
ENSAPEG00000021167CPSF39887.941ENSOCUG00000003728CPSF39987.941Oryctolagus_cuniculus
ENSAPEG00000021167CPSF39986.483ENSORLG00000018854cpsf39986.483Oryzias_latipes
ENSAPEG00000021167CPSF39986.337ENSORLG00020013331cpsf39986.337Oryzias_latipes_hni
ENSAPEG00000021167CPSF39986.483ENSORLG00015011017cpsf39986.483Oryzias_latipes_hsok
ENSAPEG00000021167CPSF310086.667ENSOMEG00000010647cpsf39686.667Oryzias_melastigma
ENSAPEG00000021167CPSF39877.794ENSOGAG00000001680CPSF39977.794Otolemur_garnettii
ENSAPEG00000021167CPSF39888.235ENSOARG00000015073CPSF39988.235Ovis_aries
ENSAPEG00000021167CPSF39887.941ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSAPEG00000021167CPSF39888.235ENSPPRG00000016790CPSF39988.235Panthera_pardus
ENSAPEG00000021167CPSF39888.365ENSPTIG00000003920CPSF39988.365Panthera_tigris_altaica
ENSAPEG00000021167CPSF39887.941ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSAPEG00000021167CPSF39887.794ENSPANG00000016798CPSF39495.208Papio_anubis
ENSAPEG00000021167CPSF310091.304ENSPKIG00000023646cpsf310091.304Paramormyrops_kingsleyae
ENSAPEG00000021167CPSF39886.784ENSPSIG00000016144CPSF39986.784Pelodiscus_sinensis
ENSAPEG00000021167CPSF39984.000ENSPMGG00000006141-9984.000Periophthalmus_magnuspinnatus
ENSAPEG00000021167CPSF36387.562ENSPMGG00000015311CPSF310090.370Periophthalmus_magnuspinnatus
ENSAPEG00000021167CPSF39888.235ENSPEMG00000017668Cpsf39988.235Peromyscus_maniculatus_bairdii
ENSAPEG00000021167CPSF38089.541ENSPMAG00000004841cpsf310089.541Petromyzon_marinus
ENSAPEG00000021167CPSF39687.838ENSPCIG00000009823CPSF39888.190Phascolarctos_cinereus
ENSAPEG00000021167CPSF310095.217ENSPFOG00000010418-10095.217Poecilia_formosa
ENSAPEG00000021167CPSF310086.667ENSPFOG00000015922cpsf310086.667Poecilia_formosa
ENSAPEG00000021167CPSF310086.667ENSPLAG00000000882cpsf310086.667Poecilia_latipinna
ENSAPEG00000021167CPSF35993.086ENSPLAG00000021300-10093.086Poecilia_latipinna
ENSAPEG00000021167CPSF310086.812ENSPMEG00000018309cpsf310086.812Poecilia_mexicana
ENSAPEG00000021167CPSF310087.971ENSPREG00000004482CPSF310087.971Poecilia_reticulata
ENSAPEG00000021167CPSF39985.783ENSPREG00000014875cpsf39985.783Poecilia_reticulata
ENSAPEG00000021167CPSF39883.676ENSPPYG00000012666CPSF39983.676Pongo_abelii
ENSAPEG00000021167CPSF38665.913ENSPCAG00000015042CPSF38965.913Procavia_capensis
ENSAPEG00000021167CPSF38690.323ENSPCOG00000023016CPSF39790.323Propithecus_coquereli
ENSAPEG00000021167CPSF39888.071ENSPVAG00000005324CPSF39988.071Pteropus_vampyrus
ENSAPEG00000021167CPSF39988.808ENSPNYG00000004405cpsf39988.808Pundamilia_nyererei
ENSAPEG00000021167CPSF38898.730ENSPNYG00000021047CPSF39298.730Pundamilia_nyererei
ENSAPEG00000021167CPSF310090.000ENSPNAG00000023060cpsf310090.000Pygocentrus_nattereri
ENSAPEG00000021167CPSF39987.372ENSRNOG00000052418Cpsf39987.372Rattus_norvegicus
ENSAPEG00000021167CPSF39882.941ENSRBIG00000041615CPSF39983.901Rhinopithecus_bieti
ENSAPEG00000021167CPSF39887.941ENSRROG00000033792CPSF39987.941Rhinopithecus_roxellana
ENSAPEG00000021167CPSF38643.182YLR277CYSH18543.182Saccharomyces_cerevisiae
ENSAPEG00000021167CPSF39981.388ENSSBOG00000027263CPSF39784.328Saimiri_boliviensis_boliviensis
ENSAPEG00000021167CPSF39887.794ENSSHAG00000007024CPSF39987.794Sarcophilus_harrisii
ENSAPEG00000021167CPSF310091.014ENSSFOG00015002108cpsf310091.014Scleropages_formosus
ENSAPEG00000021167CPSF39894.537ENSSMAG00000020534CPSF39794.537Scophthalmus_maximus
ENSAPEG00000021167CPSF310098.116ENSSDUG00000018498CPSF310098.116Seriola_dumerili
ENSAPEG00000021167CPSF310088.261ENSSDUG00000002828cpsf39788.261Seriola_dumerili
ENSAPEG00000021167CPSF310088.406ENSSLDG00000008469cpsf39788.522Seriola_lalandi_dorsalis
ENSAPEG00000021167CPSF310098.116ENSSLDG00000005234CPSF310098.116Seriola_lalandi_dorsalis
ENSAPEG00000021167CPSF38984.181ENSSARG00000005186CPSF39084.181Sorex_araneus
ENSAPEG00000021167CPSF39685.821ENSSPUG00000015525CPSF39785.821Sphenodon_punctatus
ENSAPEG00000021167CPSF310098.841ENSSPAG00000002906CPSF310098.841Stegastes_partitus
ENSAPEG00000021167CPSF310088.116ENSSPAG00000018579cpsf310088.116Stegastes_partitus
ENSAPEG00000021167CPSF39888.235ENSSSCG00000020799CPSF39988.235Sus_scrofa
ENSAPEG00000021167CPSF39987.555ENSTGUG00000013016CPSF39987.555Taeniopygia_guttata
ENSAPEG00000021167CPSF39987.645ENSTRUG00000007030cpsf39887.645Takifugu_rubripes
ENSAPEG00000021167CPSF36378.055ENSTRUG00000013905CPSF310079.310Takifugu_rubripes
ENSAPEG00000021167CPSF38491.989ENSTBEG00000002707CPSF38491.989Tupaia_belangeri
ENSAPEG00000021167CPSF38674.939ENSTTRG00000000861CPSF38774.939Tursiops_truncatus
ENSAPEG00000021167CPSF39689.506ENSUAMG00000007535CPSF39488.872Ursus_americanus
ENSAPEG00000021167CPSF39985.397ENSUMAG00000003676CPSF39493.011Ursus_maritimus
ENSAPEG00000021167CPSF39488.013ENSVPAG00000008041CPSF310088.013Vicugna_pacos
ENSAPEG00000021167CPSF39888.235ENSVVUG00000002194CPSF39988.235Vulpes_vulpes
ENSAPEG00000021167CPSF39986.067ENSXETG00000008263cpsf39986.067Xenopus_tropicalis
ENSAPEG00000021167CPSF310086.957ENSXCOG00000019695cpsf310086.957Xiphophorus_couchianus
ENSAPEG00000021167CPSF35492.473ENSXCOG00000000957-8792.473Xiphophorus_couchianus
ENSAPEG00000021167CPSF310095.652ENSXMAG00000027291CPSF310095.652Xiphophorus_maculatus
ENSAPEG00000021167CPSF310086.812ENSXMAG00000009784cpsf310086.812Xiphophorus_maculatus

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