EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000021229 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 11499 bases
Position: chr15:13929855-13941353
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000029865	RRM_1	PF00076.22	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000030665	-	6014	-	ENSAPEP00000029865	1114 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000021229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000021229	scaf4a	55	58.610	ENSG00000156304	SCAF4	69	57.031	Homo_sapiens
ENSAPEG00000021229	scaf4a	100	96.861	ENSAPOG00000002946	scaf4a	100	96.861	Acanthochromis_polyacanthus
ENSAPEG00000021229	scaf4a	100	99.194	ENSAOCG00000000615	scaf4a	100	99.194	Amphiprion_ocellaris
ENSAPEG00000021229	scaf4a	54	62.115	ENSACAG00000002569	SCAF4	68	49.485	Anolis_carolinensis
ENSAPEG00000021229	scaf4a	50	61.508	ENSACLG00000024833	scaf4b	62	71.512	Astatotilapia_calliptera
ENSAPEG00000021229	scaf4a	99	51.730	ENSAMXG00000008585	scaf4a	99	53.559	Astyanax_mexicanus
ENSAPEG00000021229	scaf4a	55	58.921	ENSCJAG00000008993	SCAF4	77	60.073	Callithrix_jacchus
ENSAPEG00000021229	scaf4a	54	60.256	ENSCAFG00020026019	SCAF4	69	59.766	Canis_lupus_dingo
ENSAPEG00000021229	scaf4a	51	56.021	ENSCCAG00000033727	SCAF4	78	50.720	Cebus_capucinus
ENSAPEG00000021229	scaf4a	55	58.636	ENSCATG00000030379	SCAF4	78	53.568	Cercocebus_atys
ENSAPEG00000021229	scaf4a	55	58.371	ENSCSAG00000009438	SCAF4	69	56.623	Chlorocebus_sabaeus
ENSAPEG00000021229	scaf4a	55	58.610	ENSCANG00000029847	SCAF4	69	57.031	Colobus_angolensis_palliatus
ENSAPEG00000021229	scaf4a	100	72.902	ENSCSEG00000019549	scaf4a	99	70.979	Cynoglossus_semilaevis
ENSAPEG00000021229	scaf4a	84	57.480	ENSDARG00000077093	scaf4a	100	50.685	Danio_rerio
ENSAPEG00000021229	scaf4a	56	84.375	ENSELUG00000009909	scaf4a	92	82.883	Esox_lucius
ENSAPEG00000021229	scaf4a	100	77.878	ENSFHEG00000017866	scaf4a	89	79.947	Fundulus_heteroclitus
ENSAPEG00000021229	scaf4a	59	58.616	ENSGALG00000033965	SCAF4	86	52.875	Gallus_gallus
ENSAPEG00000021229	scaf4a	67	81.818	ENSGAFG00000019460	scaf4a	83	82.726	Gambusia_affinis
ENSAPEG00000021229	scaf4a	73	80.269	ENSGACG00000020580	scaf4a	85	81.279	Gasterosteus_aculeatus
ENSAPEG00000021229	scaf4a	100	81.818	ENSHBUG00000007920	scaf4a	100	80.606	Haplochromis_burtoni
ENSAPEG00000021229	scaf4a	83	59.420	ENSIPUG00000011285	scaf4	83	75.000	Ictalurus_punctatus
ENSAPEG00000021229	scaf4a	64	57.554	ENSKMAG00000005742	scaf4b	55	74.691	Kryptolebias_marmoratus
ENSAPEG00000021229	scaf4a	98	78.051	ENSLBEG00000014675	scaf4a	100	80.692	Labrus_bergylta
ENSAPEG00000021229	scaf4a	59	45.694	ENSLOCG00000009162	scaf4a	86	58.193	Lepisosteus_oculatus
ENSAPEG00000021229	scaf4a	55	58.636	ENSMFAG00000037668	SCAF4	69	57.068	Macaca_fascicularis
ENSAPEG00000021229	scaf4a	55	58.636	ENSMMUG00000001712	SCAF4	69	57.068	Macaca_mulatta
ENSAPEG00000021229	scaf4a	55	58.636	ENSMNEG00000032966	SCAF4	78	53.348	Macaca_nemestrina
ENSAPEG00000021229	scaf4a	54	58.154	ENSMLEG00000039674	SCAF4	68	56.183	Mandrillus_leucophaeus
ENSAPEG00000021229	scaf4a	74	81.301	ENSMAMG00000013223	scaf4a	100	78.397	Mastacembelus_armatus
ENSAPEG00000021229	scaf4a	99	82.074	ENSMZEG00005024349	scaf4a	100	81.810	Maylandia_zebra
ENSAPEG00000021229	scaf4a	58	58.226	ENSMGAG00000014515	SCAF4	86	52.435	Meleagris_gallopavo
ENSAPEG00000021229	scaf4a	55	59.788	ENSMICG00000005256	SCAF4	69	56.693	Microcebus_murinus
ENSAPEG00000021229	scaf4a	55	57.526	ENSNGAG00000005214	Scaf4	79	52.128	Nannospalax_galili
ENSAPEG00000021229	scaf4a	100	81.481	ENSONIG00000004687	scaf4a	100	80.534	Oreochromis_niloticus
ENSAPEG00000021229	scaf4a	100	72.673	ENSORLG00000004384	scaf4a	64	80.000	Oryzias_latipes
ENSAPEG00000021229	scaf4a	65	55.914	ENSORLG00020013853	scaf4b	57	69.767	Oryzias_latipes_hni
ENSAPEG00000021229	scaf4a	100	71.320	ENSORLG00020011857	scaf4a	64	77.987	Oryzias_latipes_hni
ENSAPEG00000021229	scaf4a	100	73.254	ENSORLG00015017880	scaf4a	100	72.743	Oryzias_latipes_hsok
ENSAPEG00000021229	scaf4a	99	74.068	ENSOMEG00000014482	scaf4a	98	80.940	Oryzias_melastigma
ENSAPEG00000021229	scaf4a	55	58.610	ENSPPAG00000028535	SCAF4	69	57.031	Pan_paniscus
ENSAPEG00000021229	scaf4a	55	58.610	ENSPTRG00000013848	SCAF4	69	57.031	Pan_troglodytes
ENSAPEG00000021229	scaf4a	55	58.636	ENSPANG00000017332	SCAF4	69	57.068	Papio_anubis
ENSAPEG00000021229	scaf4a	61	65.753	ENSPKIG00000022408	scaf4a	99	63.836	Paramormyrops_kingsleyae
ENSAPEG00000021229	scaf4a	100	51.396	ENSPMGG00000016741	scaf4a	88	72.464	Periophthalmus_magnuspinnatus
ENSAPEG00000021229	scaf4a	86	74.200	ENSPFOG00000017156	scaf4a	97	75.078	Poecilia_formosa
ENSAPEG00000021229	scaf4a	67	80.940	ENSPLAG00000001972	scaf4a	91	82.815	Poecilia_latipinna
ENSAPEG00000021229	scaf4a	58	57.353	ENSPLAG00000004403	-	51	73.611	Poecilia_latipinna
ENSAPEG00000021229	scaf4a	58	57.353	ENSPMEG00000006666	-	51	74.306	Poecilia_mexicana
ENSAPEG00000021229	scaf4a	57	58.088	ENSPREG00000013510	scaf4b	57	58.454	Poecilia_reticulata
ENSAPEG00000021229	scaf4a	55	58.182	ENSPCOG00000018710	SCAF4	69	56.283	Propithecus_coquereli
ENSAPEG00000021229	scaf4a	50	61.905	ENSPNYG00000010526	scaf4b	62	71.512	Pundamilia_nyererei
ENSAPEG00000021229	scaf4a	51	74.638	ENSPNAG00000015199	-	50	74.638	Pygocentrus_nattereri
ENSAPEG00000021229	scaf4a	70	59.541	ENSPNAG00000016892	scaf4a	98	53.663	Pygocentrus_nattereri
ENSAPEG00000021229	scaf4a	55	58.459	ENSRROG00000029488	SCAF4	69	57.031	Rhinopithecus_roxellana
ENSAPEG00000021229	scaf4a	58	51.300	ENSSFOG00015006338	scaf4a	83	53.865	Scleropages_formosus
ENSAPEG00000021229	scaf4a	99	78.122	ENSSMAG00000017901	scaf4a	72	82.604	Scophthalmus_maximus
ENSAPEG00000021229	scaf4a	80	44.062	ENSSMAG00000003738	scaf4b	81	48.847	Scophthalmus_maximus
ENSAPEG00000021229	scaf4a	100	85.615	ENSSDUG00000012918	scaf4a	100	85.092	Seriola_dumerili
ENSAPEG00000021229	scaf4a	100	85.777	ENSSLDG00000021671	scaf4a	100	85.253	Seriola_lalandi_dorsalis
ENSAPEG00000021229	scaf4a	66	64.005	ENSTRUG00000023543	scaf4a	89	75.381	Takifugu_rubripes
ENSAPEG00000021229	scaf4a	61	48.392	ENSTRUG00000009536	-	54	74.648	Takifugu_rubripes
ENSAPEG00000021229	scaf4a	61	54.604	ENSXETG00000007351	scaf4	87	50.853	Xenopus_tropicalis