EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000021391 (Gene tree)
Gene ID
-
Gene Symbol
patl1
Alias
fa11d04|wu:fa11d04|zgc:158239
Full Name
protein associated with topoisomerase II homolog 1 (yeast)
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
23278 bases
Position
chr3:13014061-13037338
Accession
ZDB-GENE-070209-83
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000030135PAT1PF09770.94.9e-1311
ENSAPEP00000030088PAT1PF09770.95.8e-1311
ENSAPEP00000030111PAT1PF09770.96.3e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000030893-3907-ENSAPEP00000030088828 (aa)--
ENSAPET00000030940-3805-ENSAPEP00000030135794 (aa)--
ENSAPET00000030916-3818-ENSAPEP00000030111844 (aa)--
Gene Model
Click here to download ENSAPEG00000021391's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021391's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000021391patl15234.742ENSAPEG00000011299patl26235.176
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000021391patl18159.722ENSG00000166889PATL16265.000Homo_sapiens
ENSAPEG00000021391patl15037.561ENSG00000229474PATL29938.017Homo_sapiens
ENSAPEG00000021391patl19493.653ENSAPOG00000021290patl19993.653Acanthochromis_polyacanthus
ENSAPEG00000021391patl15734.381ENSAPOG00000022988patl25836.090Acanthochromis_polyacanthus
ENSAPEG00000021391patl15036.946ENSAMEG00000014997PATL27537.215Ailuropoda_melanoleuca
ENSAPEG00000021391patl18159.722ENSAMEG00000014215PATL15883.871Ailuropoda_melanoleuca
ENSAPEG00000021391patl18688.152ENSACIG00000005182patl19188.293Amphilophus_citrinellus
ENSAPEG00000021391patl15235.116ENSAOCG00000023738patl25135.176Amphiprion_ocellaris
ENSAPEG00000021391patl19490.665ENSAOCG00000021993patl19590.281Amphiprion_ocellaris
ENSAPEG00000021391patl15535.319ENSATEG00000019567patl26036.272Anabas_testudineus
ENSAPEG00000021391patl110083.890ENSATEG00000002230patl110084.267Anabas_testudineus
ENSAPEG00000021391patl17135.413ENSAPLG00000003980PATL26539.950Anas_platyrhynchos
ENSAPEG00000021391patl15945.047ENSAPLG00000013394PATL15161.355Anas_platyrhynchos
ENSAPEG00000021391patl17666.102ENSACAG00000006607PATL16261.017Anolis_carolinensis
ENSAPEG00000021391patl18159.722ENSANAG00000023078PATL15972.222Aotus_nancymaae
ENSAPEG00000021391patl110088.475ENSACLG00000005144patl110083.073Astatotilapia_calliptera
ENSAPEG00000021391patl15136.667ENSACLG00000010326patl25436.250Astatotilapia_calliptera
ENSAPEG00000021391patl15436.980ENSAMXG00000020293patl25737.250Astyanax_mexicanus
ENSAPEG00000021391patl16287.940ENSAMXG00000010731patl16288.191Astyanax_mexicanus
ENSAPEG00000021391patl18257.831ENSBTAG00000005913PATL15580.645Bos_taurus
ENSAPEG00000021391patl15335.426ENSCJAG00000002379PATL27236.567Callithrix_jacchus
ENSAPEG00000021391patl18159.722ENSCJAG00000016192PATL16265.000Callithrix_jacchus
ENSAPEG00000021391patl19941.879ENSCAFG00000007581PATL16265.000Canis_familiaris
ENSAPEG00000021391patl15137.440ENSCAFG00000013629PATL27337.594Canis_familiaris
ENSAPEG00000021391patl19941.928ENSCAFG00020001648PATL15780.645Canis_lupus_dingo
ENSAPEG00000021391patl15137.440ENSCAFG00020022169PATL27237.783Canis_lupus_dingo
ENSAPEG00000021391patl18159.722ENSCHIG00000025913PATL16365.000Capra_hircus
ENSAPEG00000021391patl15537.611ENSCHIG00000026665PATL27537.871Capra_hircus
ENSAPEG00000021391patl18161.111ENSTSYG00000012748PATL16363.077Carlito_syrichta
ENSAPEG00000021391patl15336.569ENSTSYG00000032456PATL27237.186Carlito_syrichta
ENSAPEG00000021391patl17968.333ENSCAPG00000013668PATL16166.667Cavia_aperea
ENSAPEG00000021391patl17968.333ENSCPOG00000006827PATL16066.667Cavia_porcellus
ENSAPEG00000021391patl18159.722ENSCCAG00000023759PATL16265.000Cebus_capucinus
ENSAPEG00000021391patl18159.722ENSCATG00000009629PATL16265.000Cercocebus_atys
ENSAPEG00000021391patl15037.805ENSCATG00000034794PATL29938.017Cercocebus_atys
ENSAPEG00000021391patl18064.062ENSCLAG00000003427PATL15977.778Chinchilla_lanigera
ENSAPEG00000021391patl15035.731ENSCLAG00000014407PATL27337.037Chinchilla_lanigera
ENSAPEG00000021391patl15037.805ENSCSAG00000009601PATL27337.965Chlorocebus_sabaeus
ENSAPEG00000021391patl17250.152ENSCSAG00000006095PATL16052.758Chlorocebus_sabaeus
ENSAPEG00000021391patl16058.000ENSCHOG00000001611PATL18258.000Choloepus_hoffmanni
ENSAPEG00000021391patl15139.089ENSCPBG00000006150PATL26039.506Chrysemys_picta_bellii
ENSAPEG00000021391patl15336.425ENSCANG00000013856PATL27337.313Colobus_angolensis_palliatus
ENSAPEG00000021391patl19941.279ENSCANG00000039197PATL16264.407Colobus_angolensis_palliatus
ENSAPEG00000021391patl17964.615ENSCGRG00001024927Patl16263.077Cricetulus_griseus_chok1gshd
ENSAPEG00000021391patl15535.491ENSCGRG00001010801Patl27337.401Cricetulus_griseus_chok1gshd
ENSAPEG00000021391patl17864.912ENSCGRG00000000461Patl15975.000Cricetulus_griseus_crigri
ENSAPEG00000021391patl15535.491ENSCGRG00000013007Patl27337.401Cricetulus_griseus_crigri
ENSAPEG00000021391patl15234.023ENSCSEG00000009438patl25733.166Cynoglossus_semilaevis
ENSAPEG00000021391patl110083.017ENSCSEG00000008261patl110082.024Cynoglossus_semilaevis
ENSAPEG00000021391patl18986.159ENSCVAG00000006664patl16787.500Cyprinodon_variegatus
ENSAPEG00000021391patl15533.705ENSCVAG00000016203patl26034.264Cyprinodon_variegatus
ENSAPEG00000021391patl110073.012ENSDARG00000017423patl15287.909Danio_rerio
ENSAPEG00000021391patl17057.812ENSDNOG00000038865PATL17552.038Dasypus_novemcinctus
ENSAPEG00000021391patl15136.715ENSDNOG00000036837PATL26737.000Dasypus_novemcinctus
ENSAPEG00000021391patl18161.111ENSDORG00000000237Patl16266.667Dipodomys_ordii
ENSAPEG00000021391patl15136.643ENSDORG00000026649Patl27338.298Dipodomys_ordii
ENSAPEG00000021391patl15335.160ENSEASG00005017984PATL27135.768Equus_asinus_asinus
ENSAPEG00000021391patl18159.722ENSEASG00005007963PATL15680.645Equus_asinus_asinus
ENSAPEG00000021391patl15335.909ENSECAG00000013462PATL27236.591Equus_caballus
ENSAPEG00000021391patl18159.722ENSECAG00000011411PATL15680.645Equus_caballus
ENSAPEG00000021391patl15934.449ENSELUG00000023244patl25436.500Esox_lucius
ENSAPEG00000021391patl110073.990ENSELUG00000024249patl110068.402Esox_lucius
ENSAPEG00000021391patl15337.045ENSFCAG00000027170PATL27338.035Felis_catus
ENSAPEG00000021391patl18159.722ENSFCAG00000015573PATL16265.000Felis_catus
ENSAPEG00000021391patl17251.662ENSFALG00000012150PATL15974.286Ficedula_albicollis
ENSAPEG00000021391patl15834.455ENSFALG00000009768PATL25536.709Ficedula_albicollis
ENSAPEG00000021391patl18060.938ENSFDAG00000016128PATL15977.778Fukomys_damarensis
ENSAPEG00000021391patl19985.055ENSFHEG00000017790patl110082.048Fundulus_heteroclitus
ENSAPEG00000021391patl15136.468ENSGMOG00000005666patl210036.520Gadus_morhua
ENSAPEG00000021391patl15636.441ENSGALG00000002167PATL25037.956Gallus_gallus
ENSAPEG00000021391patl18066.667ENSGALG00000042641PATL16365.000Gallus_gallus
ENSAPEG00000021391patl15236.385ENSGAFG00000019344patl25636.432Gambusia_affinis
ENSAPEG00000021391patl110084.179ENSGAFG00000006508patl110081.851Gambusia_affinis
ENSAPEG00000021391patl19191.379ENSGACG00000016448patl16194.388Gasterosteus_aculeatus
ENSAPEG00000021391patl19941.307ENSGAGG00000004461PATL16465.000Gopherus_agassizii
ENSAPEG00000021391patl15037.561ENSGGOG00000025923PATL27337.531Gorilla_gorilla
ENSAPEG00000021391patl18159.722ENSGGOG00000004335PATL16465.000Gorilla_gorilla
ENSAPEG00000021391patl15136.754ENSHBUG00000005929patl26136.750Haplochromis_burtoni
ENSAPEG00000021391patl110088.715ENSHBUG00000005365patl19987.380Haplochromis_burtoni
ENSAPEG00000021391patl18259.756ENSHGLG00000018173PATL16264.615Heterocephalus_glaber_female
ENSAPEG00000021391patl17958.621ENSHGLG00100003453PATL16064.865Heterocephalus_glaber_male
ENSAPEG00000021391patl110080.336ENSHCOG00000001898patl110078.375Hippocampus_comes
ENSAPEG00000021391patl15236.215ENSHCOG00000016754patl25535.750Hippocampus_comes
ENSAPEG00000021391patl17960.656ENSSTOG00000013764PATL15972.222Ictidomys_tridecemlineatus
ENSAPEG00000021391patl15335.955ENSSTOG00000033848PATL27237.656Ictidomys_tridecemlineatus
ENSAPEG00000021391patl18060.938ENSJJAG00000010135Patl15983.871Jaculus_jaculus
ENSAPEG00000021391patl110087.726ENSKMAG00000020848patl110083.634Kryptolebias_marmoratus
ENSAPEG00000021391patl15236.175ENSLBEG00000022344patl25336.842Labrus_bergylta
ENSAPEG00000021391patl110088.783ENSLBEG00000023617patl110088.067Labrus_bergylta
ENSAPEG00000021391patl17468.750ENSLACG00000004640PATL16183.871Latimeria_chalumnae
ENSAPEG00000021391patl110062.368ENSLOCG00000000717patl110060.660Lepisosteus_oculatus
ENSAPEG00000021391patl15035.613ENSLAFG00000031124PATL26836.885Loxodonta_africana
ENSAPEG00000021391patl18159.722ENSLAFG00000015161PATL16265.000Loxodonta_africana
ENSAPEG00000021391patl18159.722ENSMFAG00000040851PATL15680.645Macaca_fascicularis
ENSAPEG00000021391patl18159.722ENSMMUG00000017287PATL16265.000Macaca_mulatta
ENSAPEG00000021391patl15037.805ENSMNEG00000034510PATL27337.965Macaca_nemestrina
ENSAPEG00000021391patl18159.722ENSMNEG00000038692PATL16265.000Macaca_nemestrina
ENSAPEG00000021391patl18159.722ENSMLEG00000030044PATL16265.000Mandrillus_leucophaeus
ENSAPEG00000021391patl15135.437ENSMAMG00000013327patl26035.949Mastacembelus_armatus
ENSAPEG00000021391patl110087.723ENSMAMG00000003950patl19793.355Mastacembelus_armatus
ENSAPEG00000021391patl15136.667ENSMZEG00005014292patl25436.250Maylandia_zebra
ENSAPEG00000021391patl110088.475ENSMZEG00005013404patl19987.139Maylandia_zebra
ENSAPEG00000021391patl15636.910ENSMGAG00000001309PATL26538.386Meleagris_gallopavo
ENSAPEG00000021391patl17367.857ENSMGAG00000003406PATL15683.871Meleagris_gallopavo
ENSAPEG00000021391patl15734.409ENSMAUG00000001008Patl27536.869Mesocricetus_auratus
ENSAPEG00000021391patl17244.946ENSMAUG00000012059Patl17254.605Mesocricetus_auratus
ENSAPEG00000021391patl18159.722ENSMICG00000004172PATL16065.000Microcebus_murinus
ENSAPEG00000021391patl17964.615ENSMOCG00000010087Patl16263.077Microtus_ochrogaster
ENSAPEG00000021391patl17985.714ENSMMOG00000013711patl19393.333Mola_mola
ENSAPEG00000021391patl15536.681ENSMODG00000017690PATL27236.298Monodelphis_domestica
ENSAPEG00000021391patl19941.570ENSMODG00000020201PATL16362.500Monodelphis_domestica
ENSAPEG00000021391patl19575.541ENSMALG00000018706patl19494.429Monopterus_albus
ENSAPEG00000021391patl18161.111MGP_CAROLIEiJ_G0022739Patl16263.077Mus_caroli
ENSAPEG00000021391patl18161.111ENSMUSG00000046139Patl16263.077Mus_musculus
ENSAPEG00000021391patl18161.111MGP_PahariEiJ_G0014233Patl16263.077Mus_pahari
ENSAPEG00000021391patl18161.111MGP_SPRETEiJ_G0023652Patl16263.077Mus_spretus
ENSAPEG00000021391patl18159.722ENSMPUG00000014607PATL16265.000Mustela_putorius_furo
ENSAPEG00000021391patl18059.722ENSMLUG00000011169PATL16365.000Myotis_lucifugus
ENSAPEG00000021391patl18158.333ENSNGAG00000003682Patl15880.645Nannospalax_galili
ENSAPEG00000021391patl17081.726ENSNBRG00000015372patl17593.939Neolamprologus_brichardi
ENSAPEG00000021391patl15137.055ENSNBRG00000011745patl25837.157Neolamprologus_brichardi
ENSAPEG00000021391patl18159.722ENSNLEG00000013081PATL16465.000Nomascus_leucogenys
ENSAPEG00000021391patl15037.561ENSNLEG00000005673PATL27337.717Nomascus_leucogenys
ENSAPEG00000021391patl15757.051ENSMEUG00000009391PATL17456.329Notamacropus_eugenii
ENSAPEG00000021391patl16253.769ENSOPRG00000007963PATL17555.707Ochotona_princeps
ENSAPEG00000021391patl15147.196ENSODEG00000001792PATL17052.469Octodon_degus
ENSAPEG00000021391patl16832.979ENSONIG00000011519patl25435.750Oreochromis_niloticus
ENSAPEG00000021391patl110087.019ENSONIG00000004170patl19986.659Oreochromis_niloticus
ENSAPEG00000021391patl15435.181ENSOCUG00000006339PATL27536.524Oryctolagus_cuniculus
ENSAPEG00000021391patl18159.722ENSOCUG00000002156PATL16265.000Oryctolagus_cuniculus
ENSAPEG00000021391patl15236.047ENSORLG00000005780patl25436.000Oryzias_latipes
ENSAPEG00000021391patl15236.047ENSORLG00020016506patl25336.000Oryzias_latipes_hni
ENSAPEG00000021391patl15236.047ENSORLG00015014500patl25436.000Oryzias_latipes_hsok
ENSAPEG00000021391patl15035.610ENSOMEG00000021628patl25735.678Oryzias_melastigma
ENSAPEG00000021391patl18159.722ENSOGAG00000004351PATL16265.000Otolemur_garnettii
ENSAPEG00000021391patl15036.765ENSOGAG00000004709PATL27237.215Otolemur_garnettii
ENSAPEG00000021391patl15236.530ENSOARG00000003762PATL27237.056Ovis_aries
ENSAPEG00000021391patl18059.375ENSOARG00000012005PATL15680.645Ovis_aries
ENSAPEG00000021391patl15037.561ENSPPAG00000007221PATL27237.717Pan_paniscus
ENSAPEG00000021391patl18159.722ENSPPAG00000034275PATL16365.000Pan_paniscus
ENSAPEG00000021391patl18059.375ENSPPRG00000020639PATL15880.645Panthera_pardus
ENSAPEG00000021391patl15336.364ENSPPRG00000004279PATL27337.280Panthera_pardus
ENSAPEG00000021391patl18159.722ENSPTIG00000019298PATL16265.000Panthera_tigris_altaica
ENSAPEG00000021391patl15336.364ENSPTIG00000018964PATL27337.280Panthera_tigris_altaica
ENSAPEG00000021391patl15037.561ENSPTRG00000041536PATL27237.717Pan_troglodytes
ENSAPEG00000021391patl18159.722ENSPTRG00000003697PATL16265.000Pan_troglodytes
ENSAPEG00000021391patl15037.805ENSPANG00000018026PATL27337.965Papio_anubis
ENSAPEG00000021391patl18159.722ENSPANG00000035620PATL16265.000Papio_anubis
ENSAPEG00000021391patl18353.191ENSPSIG00000016206PATL15965.000Pelodiscus_sinensis
ENSAPEG00000021391patl110079.976ENSPMGG00000002644patl19490.909Periophthalmus_magnuspinnatus
ENSAPEG00000021391patl16531.349ENSPMGG00000014550patl26234.848Periophthalmus_magnuspinnatus
ENSAPEG00000021391patl17964.615ENSPEMG00000014215Patl15975.000Peromyscus_maniculatus_bairdii
ENSAPEG00000021391patl19941.483ENSPCIG00000010852PATL16363.077Phascolarctos_cinereus
ENSAPEG00000021391patl15136.817ENSPCIG00000018256PATL27636.923Phascolarctos_cinereus
ENSAPEG00000021391patl110081.665ENSPFOG00000007768patl110082.105Poecilia_formosa
ENSAPEG00000021391patl110083.957ENSPLAG00000018465patl19983.092Poecilia_latipinna
ENSAPEG00000021391patl110084.318ENSPMEG00000006555patl19982.609Poecilia_mexicana
ENSAPEG00000021391patl19081.989ENSPREG00000003874patl19580.485Poecilia_reticulata
ENSAPEG00000021391patl18159.722ENSPPYG00000003230PATL16265.000Pongo_abelii
ENSAPEG00000021391patl15437.444ENSPCOG00000000295PATL29939.726Propithecus_coquereli
ENSAPEG00000021391patl18159.722ENSPCOG00000020770PATL16465.000Propithecus_coquereli
ENSAPEG00000021391patl17248.702ENSPVAG00000015239PATL16350.244Pteropus_vampyrus
ENSAPEG00000021391patl18695.652ENSPNYG00000018936patl19495.666Pundamilia_nyererei
ENSAPEG00000021391patl17431.291ENSPNYG00000017381patl26136.500Pundamilia_nyererei
ENSAPEG00000021391patl15337.029ENSPNAG00000002315patl25738.060Pygocentrus_nattereri
ENSAPEG00000021391patl110075.359ENSPNAG00000017907patl15188.693Pygocentrus_nattereri
ENSAPEG00000021391patl18161.111ENSRNOG00000021052Patl16263.077Rattus_norvegicus
ENSAPEG00000021391patl18159.722ENSRBIG00000032263PATL18263.077Rhinopithecus_bieti
ENSAPEG00000021391patl18159.722ENSRROG00000032861PATL16265.000Rhinopithecus_roxellana
ENSAPEG00000021391patl18159.722ENSSBOG00000025195PATL16365.000Saimiri_boliviensis_boliviensis
ENSAPEG00000021391patl18257.317ENSSHAG00000004309PATL16265.000Sarcophilus_harrisii
ENSAPEG00000021391patl110072.302ENSSFOG00015009614patl19587.121Scleropages_formosus
ENSAPEG00000021391patl110086.005ENSSMAG00000009482patl110085.646Scophthalmus_maximus
ENSAPEG00000021391patl17030.960ENSSMAG00000017262patl26335.696Scophthalmus_maximus
ENSAPEG00000021391patl110087.204ENSSDUG00000005362patl110087.158Seriola_dumerili
ENSAPEG00000021391patl15236.300ENSSDUG00000022927patl25436.090Seriola_dumerili
ENSAPEG00000021391patl110086.833ENSSLDG00000019146patl110086.667Seriola_lalandi_dorsalis
ENSAPEG00000021391patl15136.706ENSSLDG00000017922patl25937.280Seriola_lalandi_dorsalis
ENSAPEG00000021391patl15951.141ENSSARG00000009600PATL15454.197Sorex_araneus
ENSAPEG00000021391patl17960.976ENSSPUG00000009453PATL16363.077Sphenodon_punctatus
ENSAPEG00000021391patl19982.545ENSSPAG00000003187patl19981.091Stegastes_partitus
ENSAPEG00000021391patl17431.350ENSSPAG00000004784patl26136.020Stegastes_partitus
ENSAPEG00000021391patl18159.722ENSSSCG00000013124PATL15780.645Sus_scrofa
ENSAPEG00000021391patl17251.201ENSTGUG00000006222PATL15880.645Taeniopygia_guttata
ENSAPEG00000021391patl110073.333ENSTRUG00000000709patl110072.662Takifugu_rubripes
ENSAPEG00000021391patl17061.538ENSTBEG00000000796PATL15770.968Tupaia_belangeri
ENSAPEG00000021391patl16553.846ENSTTRG00000009389PATL17955.435Tursiops_truncatus
ENSAPEG00000021391patl15036.740ENSUAMG00000018533PATL27137.000Ursus_americanus
ENSAPEG00000021391patl15036.740ENSUMAG00000007738PATL27137.000Ursus_maritimus
ENSAPEG00000021391patl17866.667ENSUMAG00000018634PATL15883.871Ursus_maritimus
ENSAPEG00000021391patl15137.440ENSVVUG00000011576PATL27337.594Vulpes_vulpes
ENSAPEG00000021391patl18059.375ENSVVUG00000016668PATL16080.645Vulpes_vulpes
ENSAPEG00000021391patl17387.450ENSXCOG00000010808patl18188.136Xiphophorus_couchianus
ENSAPEG00000021391patl110083.454ENSXMAG00000013834patl110081.265Xiphophorus_maculatus

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