EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000021453 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: APEX nuclease (multifunctional DNA repair enzyme) 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 5470 bases
Position: chr21:5586532-5592001
Accession: ZDB-GENE-040426-2761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000030199	Exo_endo_phos	PF03372.23	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000031004	-	3166	-	ENSAPEP00000030199	309 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000021453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000021453	apex1	90	69.534	ENSG00000100823	APEX1	88	69.534	Homo_sapiens
ENSAPEG00000021453	apex1	100	96.452	ENSAPOG00000017002	apex1	100	96.452	Acanthochromis_polyacanthus
ENSAPEG00000021453	apex1	90	68.817	ENSAMEG00000005418	APEX1	88	68.817	Ailuropoda_melanoleuca
ENSAPEG00000021453	apex1	90	90.614	ENSACIG00000010653	apex1	95	90.714	Amphilophus_citrinellus
ENSAPEG00000021453	apex1	100	99.676	ENSAOCG00000009649	apex1	100	99.676	Amphiprion_ocellaris
ENSAPEG00000021453	apex1	99	89.320	ENSATEG00000002883	apex1	97	89.320	Anabas_testudineus
ENSAPEG00000021453	apex1	91	71.071	ENSACAG00000008099	APEX1	88	71.071	Anolis_carolinensis
ENSAPEG00000021453	apex1	90	69.892	ENSANAG00000030117	APEX1	88	69.892	Aotus_nancymaae
ENSAPEG00000021453	apex1	89	92.364	ENSACLG00000018441	apex1	100	89.677	Astatotilapia_calliptera
ENSAPEG00000021453	apex1	99	83.871	ENSAMXG00000034699	apex1	99	83.548	Astyanax_mexicanus
ENSAPEG00000021453	apex1	90	68.100	ENSBTAG00000002745	APEX1	88	68.100	Bos_taurus
ENSAPEG00000021453	apex1	91	44.056	WBGene00001372	exo-3	92	45.318	Caenorhabditis_elegans
ENSAPEG00000021453	apex1	90	69.892	ENSCJAG00000009726	APEX1	88	69.892	Callithrix_jacchus
ENSAPEG00000021453	apex1	99	65.300	ENSCAFG00000032033	APEX1	99	65.506	Canis_familiaris
ENSAPEG00000021453	apex1	99	65.300	ENSCAFG00020014377	-	99	65.506	Canis_lupus_dingo
ENSAPEG00000021453	apex1	53	58.824	ENSCAFG00020023002	-	94	58.824	Canis_lupus_dingo
ENSAPEG00000021453	apex1	90	54.676	ENSCHIG00000014537	-	89	54.676	Capra_hircus
ENSAPEG00000021453	apex1	90	68.100	ENSCHIG00000007298	-	88	68.100	Capra_hircus
ENSAPEG00000021453	apex1	93	67.474	ENSTSYG00000034813	APEX1	88	68.459	Carlito_syrichta
ENSAPEG00000021453	apex1	93	61.724	ENSCAPG00000016235	APEX1	91	69.492	Cavia_aperea
ENSAPEG00000021453	apex1	94	68.041	ENSCPOG00000030909	APEX1	88	69.534	Cavia_porcellus
ENSAPEG00000021453	apex1	90	69.892	ENSCCAG00000033056	-	88	69.892	Cebus_capucinus
ENSAPEG00000021453	apex1	90	60.215	ENSCCAG00000031931	-	87	60.215	Cebus_capucinus
ENSAPEG00000021453	apex1	94	67.931	ENSCATG00000015580	APEX1	88	69.176	Cercocebus_atys
ENSAPEG00000021453	apex1	93	68.512	ENSCLAG00000001002	APEX1	88	69.534	Chinchilla_lanigera
ENSAPEG00000021453	apex1	94	68.276	ENSCSAG00000016685	-	88	69.534	Chlorocebus_sabaeus
ENSAPEG00000021453	apex1	94	68.276	ENSCSAG00000016670	-	88	69.534	Chlorocebus_sabaeus
ENSAPEG00000021453	apex1	99	67.722	ENSCPBG00000009567	APEX1	87	73.022	Chrysemys_picta_bellii
ENSAPEG00000021453	apex1	86	59.176	ENSCING00000008137	-	85	59.176	Ciona_intestinalis
ENSAPEG00000021453	apex1	86	51.493	ENSCSAVG00000007144	-	100	53.101	Ciona_savignyi
ENSAPEG00000021453	apex1	99	65.815	ENSCANG00000030726	APEX1	88	69.534	Colobus_angolensis_palliatus
ENSAPEG00000021453	apex1	99	63.407	ENSCGRG00001017046	Apex1	88	67.742	Cricetulus_griseus_chok1gshd
ENSAPEG00000021453	apex1	99	63.407	ENSCGRG00000008984	Apex1	88	67.742	Cricetulus_griseus_crigri
ENSAPEG00000021453	apex1	100	88.065	ENSCSEG00000017499	apex1	99	88.065	Cynoglossus_semilaevis
ENSAPEG00000021453	apex1	100	90.968	ENSCVAG00000022075	apex1	100	90.968	Cyprinodon_variegatus
ENSAPEG00000021453	apex1	99	82.468	ENSDARG00000045843	apex1	99	82.468	Danio_rerio
ENSAPEG00000021453	apex1	90	65.591	ENSDNOG00000042234	APEX1	83	65.591	Dasypus_novemcinctus
ENSAPEG00000021453	apex1	93	68.056	ENSDORG00000001616	Apex1	88	69.176	Dipodomys_ordii
ENSAPEG00000021453	apex1	90	69.534	ENSETEG00000004855	-	88	69.534	Echinops_telfairi
ENSAPEG00000021453	apex1	77	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSAPEG00000021453	apex1	99	65.079	ENSEASG00005017489	APEX1	65	69.534	Equus_asinus_asinus
ENSAPEG00000021453	apex1	99	65.079	ENSECAG00000022325	APEX1	72	69.534	Equus_caballus
ENSAPEG00000021453	apex1	87	68.773	ENSEEUG00000012569	APEX1	93	68.773	Erinaceus_europaeus
ENSAPEG00000021453	apex1	99	82.258	ENSELUG00000021706	apex1	99	84.194	Esox_lucius
ENSAPEG00000021453	apex1	93	68.512	ENSFCAG00000030869	APEX1	88	69.534	Felis_catus
ENSAPEG00000021453	apex1	93	68.858	ENSFDAG00000006120	APEX1	88	69.892	Fukomys_damarensis
ENSAPEG00000021453	apex1	100	90.968	ENSFHEG00000009031	apex1	83	90.968	Fundulus_heteroclitus
ENSAPEG00000021453	apex1	100	77.097	ENSGMOG00000007943	apex1	99	77.097	Gadus_morhua
ENSAPEG00000021453	apex1	100	90.968	ENSGAFG00000005311	apex1	100	90.968	Gambusia_affinis
ENSAPEG00000021453	apex1	100	88.710	ENSGACG00000019497	apex1	99	90.602	Gasterosteus_aculeatus
ENSAPEG00000021453	apex1	99	67.722	ENSGAGG00000014999	APEX1	87	73.022	Gopherus_agassizii
ENSAPEG00000021453	apex1	99	62.080	ENSGGOG00000002128	APEX1	88	69.176	Gorilla_gorilla
ENSAPEG00000021453	apex1	100	88.997	ENSHBUG00000005894	apex1	100	88.997	Haplochromis_burtoni
ENSAPEG00000021453	apex1	93	68.512	ENSHGLG00000002848	APEX1	88	69.534	Heterocephalus_glaber_female
ENSAPEG00000021453	apex1	93	68.512	ENSHGLG00100017878	APEX1	88	69.534	Heterocephalus_glaber_male
ENSAPEG00000021453	apex1	100	88.424	ENSHCOG00000009961	apex1	100	87.460	Hippocampus_comes
ENSAPEG00000021453	apex1	99	81.877	ENSIPUG00000005799	apex1	99	81.877	Ictalurus_punctatus
ENSAPEG00000021453	apex1	90	69.534	ENSSTOG00000010096	APEX1	88	69.534	Ictidomys_tridecemlineatus
ENSAPEG00000021453	apex1	90	60.573	ENSJJAG00000020465	-	90	60.573	Jaculus_jaculus
ENSAPEG00000021453	apex1	99	56.869	ENSJJAG00000003660	-	98	56.869	Jaculus_jaculus
ENSAPEG00000021453	apex1	99	64.856	ENSJJAG00000012067	-	98	64.217	Jaculus_jaculus
ENSAPEG00000021453	apex1	100	89.032	ENSKMAG00000021171	apex1	100	89.032	Kryptolebias_marmoratus
ENSAPEG00000021453	apex1	100	89.355	ENSLBEG00000010248	apex1	100	89.355	Labrus_bergylta
ENSAPEG00000021453	apex1	99	72.756	ENSLACG00000008617	APEX1	89	76.429	Latimeria_chalumnae
ENSAPEG00000021453	apex1	99	74.757	ENSLOCG00000015516	apex1	97	73.786	Lepisosteus_oculatus
ENSAPEG00000021453	apex1	90	69.892	ENSLAFG00000021872	APEX1	88	69.892	Loxodonta_africana
ENSAPEG00000021453	apex1	93	68.166	ENSMFAG00000002565	APEX1	88	69.176	Macaca_fascicularis
ENSAPEG00000021453	apex1	93	68.166	ENSMMUG00000048039	APEX1	88	69.176	Macaca_mulatta
ENSAPEG00000021453	apex1	99	64.465	ENSMNEG00000036944	APEX1	88	69.176	Macaca_nemestrina
ENSAPEG00000021453	apex1	94	67.931	ENSMLEG00000042125	APEX1	88	69.176	Mandrillus_leucophaeus
ENSAPEG00000021453	apex1	100	87.742	ENSMAMG00000023526	apex1	100	87.742	Mastacembelus_armatus
ENSAPEG00000021453	apex1	89	92.364	ENSMZEG00005014187	apex1	100	89.677	Maylandia_zebra
ENSAPEG00000021453	apex1	99	63.057	ENSMAUG00000013994	Apex1	88	67.742	Mesocricetus_auratus
ENSAPEG00000021453	apex1	99	64.241	ENSMICG00000043554	APEX1	88	68.459	Microcebus_murinus
ENSAPEG00000021453	apex1	99	65.079	ENSMOCG00000013721	Apex1	88	69.176	Microtus_ochrogaster
ENSAPEG00000021453	apex1	100	86.452	ENSMMOG00000010031	apex1	97	86.452	Mola_mola
ENSAPEG00000021453	apex1	90	67.742	ENSMODG00000007125	APEX1	87	67.742	Monodelphis_domestica
ENSAPEG00000021453	apex1	91	83.929	ENSMALG00000011699	apex1	75	83.929	Monopterus_albus
ENSAPEG00000021453	apex1	99	65.190	MGP_CAROLIEiJ_G0019209	Apex1	88	69.424	Mus_caroli
ENSAPEG00000021453	apex1	99	65.300	ENSMUSG00000035960	Apex1	88	69.534	Mus_musculus
ENSAPEG00000021453	apex1	89	69.675	MGP_PahariEiJ_G0030232	Apex1	88	69.534	Mus_pahari
ENSAPEG00000021453	apex1	99	65.300	MGP_SPRETEiJ_G0020101	Apex1	88	69.534	Mus_spretus
ENSAPEG00000021453	apex1	94	67.354	ENSMLUG00000028957	APEX1	87	68.459	Myotis_lucifugus
ENSAPEG00000021453	apex1	93	67.474	ENSNGAG00000002725	-	87	69.203	Nannospalax_galili
ENSAPEG00000021453	apex1	81	53.200	ENSNGAG00000021748	-	72	54.167	Nannospalax_galili
ENSAPEG00000021453	apex1	89	92.364	ENSNBRG00000005334	apex1	91	89.677	Neolamprologus_brichardi
ENSAPEG00000021453	apex1	90	69.176	ENSNLEG00000010839	APEX1	89	69.176	Nomascus_leucogenys
ENSAPEG00000021453	apex1	99	63.898	ENSMEUG00000014519	APEX1	89	67.384	Notamacropus_eugenii
ENSAPEG00000021453	apex1	99	64.103	ENSOPRG00000014029	APEX1	88	67.742	Ochotona_princeps
ENSAPEG00000021453	apex1	99	52.500	ENSODEG00000006583	-	87	54.737	Octodon_degus
ENSAPEG00000021453	apex1	90	52.688	ENSODEG00000004777	-	83	56.349	Octodon_degus
ENSAPEG00000021453	apex1	93	68.512	ENSODEG00000001703	-	88	69.534	Octodon_degus
ENSAPEG00000021453	apex1	95	90.508	ENSONIG00000012089	apex1	100	89.677	Oreochromis_niloticus
ENSAPEG00000021453	apex1	89	67.636	ENSOANG00000008836	APEX1	68	67.636	Ornithorhynchus_anatinus
ENSAPEG00000021453	apex1	90	69.534	ENSOCUG00000005022	APEX1	88	69.534	Oryctolagus_cuniculus
ENSAPEG00000021453	apex1	100	89.711	ENSORLG00000012378	apex1	100	89.711	Oryzias_latipes
ENSAPEG00000021453	apex1	100	89.711	ENSORLG00020021371	apex1	100	89.711	Oryzias_latipes_hni
ENSAPEG00000021453	apex1	100	89.711	ENSORLG00015020089	apex1	100	89.711	Oryzias_latipes_hsok
ENSAPEG00000021453	apex1	100	90.354	ENSOMEG00000018876	apex1	100	90.354	Oryzias_melastigma
ENSAPEG00000021453	apex1	90	61.649	ENSOGAG00000029355	-	89	61.649	Otolemur_garnettii
ENSAPEG00000021453	apex1	99	65.190	ENSOGAG00000013335	-	88	69.534	Otolemur_garnettii
ENSAPEG00000021453	apex1	90	68.459	ENSOARG00000019740	-	88	68.459	Ovis_aries
ENSAPEG00000021453	apex1	99	53.896	ENSOARG00000014424	-	89	57.706	Ovis_aries
ENSAPEG00000021453	apex1	87	65.056	ENSOARG00000001876	-	87	65.056	Ovis_aries
ENSAPEG00000021453	apex1	90	69.534	ENSPPAG00000038760	APEX1	89	69.534	Pan_paniscus
ENSAPEG00000021453	apex1	90	69.534	ENSPPRG00000011794	APEX1	88	69.534	Panthera_pardus
ENSAPEG00000021453	apex1	93	68.512	ENSPTIG00000014829	APEX1	88	69.534	Panthera_tigris_altaica
ENSAPEG00000021453	apex1	90	69.534	ENSPTRG00000006093	APEX1	89	69.534	Pan_troglodytes
ENSAPEG00000021453	apex1	94	67.931	ENSPANG00000022757	APEX1	88	69.176	Papio_anubis
ENSAPEG00000021453	apex1	89	86.232	ENSPKIG00000003504	apex1	99	83.013	Paramormyrops_kingsleyae
ENSAPEG00000021453	apex1	88	75.824	ENSPMGG00000016596	apex1	80	75.824	Periophthalmus_magnuspinnatus
ENSAPEG00000021453	apex1	99	64.038	ENSPEMG00000019097	Apex1	88	68.459	Peromyscus_maniculatus_bairdii
ENSAPEG00000021453	apex1	93	70.103	ENSPMAG00000007275	-	95	71.326	Petromyzon_marinus
ENSAPEG00000021453	apex1	90	67.384	ENSPCIG00000023274	APEX1	87	67.384	Phascolarctos_cinereus
ENSAPEG00000021453	apex1	100	90.645	ENSPFOG00000004178	apex1	100	90.645	Poecilia_formosa
ENSAPEG00000021453	apex1	100	90.323	ENSPLAG00000012779	apex1	100	90.323	Poecilia_latipinna
ENSAPEG00000021453	apex1	100	90.645	ENSPMEG00000019623	apex1	100	90.645	Poecilia_mexicana
ENSAPEG00000021453	apex1	100	88.710	ENSPREG00000014298	apex1	99	88.710	Poecilia_reticulata
ENSAPEG00000021453	apex1	90	69.176	ENSPPYG00000005565	APEX1	88	69.176	Pongo_abelii
ENSAPEG00000021453	apex1	94	66.207	ENSPCAG00000010376	APEX1	88	67.742	Procavia_capensis
ENSAPEG00000021453	apex1	99	64.557	ENSPCOG00000021564	APEX1	88	68.817	Propithecus_coquereli
ENSAPEG00000021453	apex1	93	68.166	ENSPVAG00000010736	APEX1	87	69.176	Pteropus_vampyrus
ENSAPEG00000021453	apex1	89	92.727	ENSPNYG00000023940	apex1	100	90.000	Pundamilia_nyererei
ENSAPEG00000021453	apex1	92	84.615	ENSPNAG00000020897	apex1	96	84.561	Pygocentrus_nattereri
ENSAPEG00000021453	apex1	99	64.984	ENSRNOG00000009663	Apex1	88	69.176	Rattus_norvegicus
ENSAPEG00000021453	apex1	94	68.276	ENSRBIG00000038325	APEX1	87	69.534	Rhinopithecus_bieti
ENSAPEG00000021453	apex1	90	69.892	ENSSBOG00000018921	-	88	69.892	Saimiri_boliviensis_boliviensis
ENSAPEG00000021453	apex1	99	58.252	ENSSBOG00000031372	-	91	60.932	Saimiri_boliviensis_boliviensis
ENSAPEG00000021453	apex1	90	66.667	ENSSHAG00000013524	APEX1	87	66.667	Sarcophilus_harrisii
ENSAPEG00000021453	apex1	99	80.519	ENSSFOG00015001948	apex1	99	80.519	Scleropages_formosus
ENSAPEG00000021453	apex1	100	86.984	ENSSMAG00000013348	apex1	100	87.619	Scophthalmus_maximus
ENSAPEG00000021453	apex1	100	88.710	ENSSDUG00000016377	apex1	99	88.710	Seriola_dumerili
ENSAPEG00000021453	apex1	100	89.032	ENSSLDG00000023005	apex1	100	89.032	Seriola_lalandi_dorsalis
ENSAPEG00000021453	apex1	91	70.357	ENSSPUG00000000531	APEX1	94	70.251	Sphenodon_punctatus
ENSAPEG00000021453	apex1	100	93.226	ENSSPAG00000000458	apex1	100	93.226	Stegastes_partitus
ENSAPEG00000021453	apex1	99	65.300	ENSSSCG00000040060	-	87	69.565	Sus_scrofa
ENSAPEG00000021453	apex1	95	39.867	ENSSSCG00000039705	-	89	41.877	Sus_scrofa
ENSAPEG00000021453	apex1	76	57.447	ENSTGUG00000014378	APEX1	100	57.447	Taeniopygia_guttata
ENSAPEG00000021453	apex1	90	86.282	ENSTRUG00000004268	apex1	95	82.748	Takifugu_rubripes
ENSAPEG00000021453	apex1	100	84.466	ENSTNIG00000005778	apex1	100	84.466	Tetraodon_nigroviridis
ENSAPEG00000021453	apex1	90	66.667	ENSTBEG00000006405	APEX1	88	66.667	Tupaia_belangeri
ENSAPEG00000021453	apex1	76	68.511	ENSTTRG00000007860	APEX1	100	68.511	Tursiops_truncatus
ENSAPEG00000021453	apex1	94	67.354	ENSUAMG00000010457	APEX1	88	68.817	Ursus_americanus
ENSAPEG00000021453	apex1	94	67.354	ENSUMAG00000009178	APEX1	88	68.817	Ursus_maritimus
ENSAPEG00000021453	apex1	76	64.255	ENSVPAG00000005083	APEX1	100	64.255	Vicugna_pacos
ENSAPEG00000021453	apex1	99	64.984	ENSVVUG00000009010	APEX1	99	65.190	Vulpes_vulpes
ENSAPEG00000021453	apex1	99	67.834	ENSXETG00000024773	apex1	99	68.153	Xenopus_tropicalis
ENSAPEG00000021453	apex1	100	90.000	ENSXCOG00000015233	apex1	99	90.000	Xiphophorus_couchianus
ENSAPEG00000021453	apex1	100	90.000	ENSXMAG00000006195	apex1	100	90.000	Xiphophorus_maculatus