EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000021686 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 40108 bases
Position: chr6:19284939-19325046
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000030496	SHQ1	PF04925.15	8.5e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000031310	-	3440	-	ENSAPEP00000030496	609 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000021686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000021686	shq1	92	53.741	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSAPEG00000021686	shq1	100	94.290	ENSAPOG00000000397	shq1	100	94.290	Acanthochromis_polyacanthus
ENSAPEG00000021686	shq1	90	54.690	ENSAMEG00000015140	SHQ1	77	61.798	Ailuropoda_melanoleuca
ENSAPEG00000021686	shq1	100	80.392	ENSACIG00000021249	shq1	100	80.392	Amphilophus_citrinellus
ENSAPEG00000021686	shq1	100	98.371	ENSAOCG00000023311	shq1	100	98.371	Amphiprion_ocellaris
ENSAPEG00000021686	shq1	98	77.537	ENSATEG00000008475	shq1	98	77.537	Anabas_testudineus
ENSAPEG00000021686	shq1	72	60.179	ENSAPLG00000013926	SHQ1	87	60.179	Anas_platyrhynchos
ENSAPEG00000021686	shq1	72	61.969	ENSACAG00000014809	SHQ1	66	62.192	Anolis_carolinensis
ENSAPEG00000021686	shq1	93	52.108	ENSANAG00000029241	SHQ1	75	61.785	Aotus_nancymaae
ENSAPEG00000021686	shq1	91	39.719	ENSANAG00000030500	-	74	44.009	Aotus_nancymaae
ENSAPEG00000021686	shq1	100	78.033	ENSACLG00000023077	shq1	100	74.804	Astatotilapia_calliptera
ENSAPEG00000021686	shq1	75	63.537	ENSAMXG00000043822	shq1	98	54.146	Astyanax_mexicanus
ENSAPEG00000021686	shq1	93	52.659	ENSBTAG00000005436	SHQ1	76	62.640	Bos_taurus
ENSAPEG00000021686	shq1	69	31.106	WBGene00021655	Y48A5A.1	92	31.250	Caenorhabditis_elegans
ENSAPEG00000021686	shq1	70	61.327	ENSCJAG00000015131	SHQ1	75	61.327	Callithrix_jacchus
ENSAPEG00000021686	shq1	92	52.650	ENSCAFG00000006434	SHQ1	77	62.697	Canis_familiaris
ENSAPEG00000021686	shq1	92	52.821	ENSCAFG00020016743	SHQ1	77	62.921	Canis_lupus_dingo
ENSAPEG00000021686	shq1	91	55.245	ENSCHIG00000012271	SHQ1	69	62.864	Capra_hircus
ENSAPEG00000021686	shq1	70	59.447	ENSTSYG00000014439	SHQ1	75	59.447	Carlito_syrichta
ENSAPEG00000021686	shq1	83	48.654	ENSCAPG00000009343	SHQ1	95	62.821	Cavia_aperea
ENSAPEG00000021686	shq1	91	53.380	ENSCPOG00000011443	SHQ1	96	54.035	Cavia_porcellus
ENSAPEG00000021686	shq1	91	41.391	ENSCCAG00000036087	-	75	46.667	Cebus_capucinus
ENSAPEG00000021686	shq1	70	53.089	ENSCCAG00000027080	SHQ1	73	53.089	Cebus_capucinus
ENSAPEG00000021686	shq1	67	63.702	ENSCATG00000041238	SHQ1	75	63.616	Cercocebus_atys
ENSAPEG00000021686	shq1	94	52.462	ENSCLAG00000004206	SHQ1	75	62.700	Chinchilla_lanigera
ENSAPEG00000021686	shq1	52	61.162	ENSCSAG00000011514	SHQ1	70	61.207	Chlorocebus_sabaeus
ENSAPEG00000021686	shq1	55	51.445	ENSCHOG00000003273	-	84	70.000	Choloepus_hoffmanni
ENSAPEG00000021686	shq1	98	49.919	ENSCPBG00000006441	SHQ1	71	61.591	Chrysemys_picta_bellii
ENSAPEG00000021686	shq1	64	42.643	ENSCING00000008013	-	96	43.182	Ciona_intestinalis
ENSAPEG00000021686	shq1	67	40.488	ENSCSAVG00000002332	-	98	40.972	Ciona_savignyi
ENSAPEG00000021686	shq1	91	53.002	ENSCANG00000039295	SHQ1	76	62.929	Colobus_angolensis_palliatus
ENSAPEG00000021686	shq1	70	61.098	ENSCGRG00001012583	Shq1	77	61.098	Cricetulus_griseus_chok1gshd
ENSAPEG00000021686	shq1	70	61.098	ENSCGRG00000009849	Shq1	77	61.098	Cricetulus_griseus_crigri
ENSAPEG00000021686	shq1	99	70.947	ENSCSEG00000007829	shq1	99	72.392	Cynoglossus_semilaevis
ENSAPEG00000021686	shq1	98	72.667	ENSCVAG00000020049	shq1	99	72.500	Cyprinodon_variegatus
ENSAPEG00000021686	shq1	98	55.263	ENSDARG00000058522	shq1	97	54.590	Danio_rerio
ENSAPEG00000021686	shq1	93	54.499	ENSDNOG00000033937	SHQ1	77	62.361	Dasypus_novemcinctus
ENSAPEG00000021686	shq1	90	49.298	ENSETEG00000005766	SHQ1	76	55.606	Echinops_telfairi
ENSAPEG00000021686	shq1	61	48.021	ENSEBUG00000005445	shq1	79	49.432	Eptatretus_burgeri
ENSAPEG00000021686	shq1	71	62.500	ENSEASG00005002237	SHQ1	77	62.500	Equus_asinus_asinus
ENSAPEG00000021686	shq1	71	62.500	ENSECAG00000015673	SHQ1	76	62.500	Equus_caballus
ENSAPEG00000021686	shq1	70	62.700	ENSEEUG00000010568	SHQ1	76	62.700	Erinaceus_europaeus
ENSAPEG00000021686	shq1	98	64.214	ENSELUG00000003476	shq1	99	64.321	Esox_lucius
ENSAPEG00000021686	shq1	91	53.043	ENSFCAG00000012781	SHQ1	77	61.573	Felis_catus
ENSAPEG00000021686	shq1	98	53.045	ENSFALG00000013428	SHQ1	72	62.723	Ficedula_albicollis
ENSAPEG00000021686	shq1	67	62.019	ENSFDAG00000005595	SHQ1	68	61.136	Fukomys_damarensis
ENSAPEG00000021686	shq1	98	71.906	ENSFHEG00000017552	shq1	100	71.906	Fundulus_heteroclitus
ENSAPEG00000021686	shq1	64	76.350	ENSGMOG00000007350	shq1	100	75.578	Gadus_morhua
ENSAPEG00000021686	shq1	98	51.027	ENSGALG00000007798	SHQ1	99	50.562	Gallus_gallus
ENSAPEG00000021686	shq1	64	81.234	ENSGACG00000011797	shq1	100	80.977	Gasterosteus_aculeatus
ENSAPEG00000021686	shq1	92	53.401	ENSGGOG00000034818	SHQ1	75	62.471	Gorilla_gorilla
ENSAPEG00000021686	shq1	100	78.033	ENSHBUG00000010857	shq1	100	78.361	Haplochromis_burtoni
ENSAPEG00000021686	shq1	96	50.243	ENSHGLG00000003637	SHQ1	68	61.556	Heterocephalus_glaber_female
ENSAPEG00000021686	shq1	96	50.407	ENSHGLG00100011957	SHQ1	68	61.556	Heterocephalus_glaber_male
ENSAPEG00000021686	shq1	98	67.993	ENSHCOG00000010799	shq1	99	68.220	Hippocampus_comes
ENSAPEG00000021686	shq1	91	52.566	ENSSTOG00000010043	SHQ1	81	59.556	Ictidomys_tridecemlineatus
ENSAPEG00000021686	shq1	70	62.700	ENSJJAG00000017611	Shq1	71	68.750	Jaculus_jaculus
ENSAPEG00000021686	shq1	100	75.246	ENSKMAG00000004457	shq1	100	75.574	Kryptolebias_marmoratus
ENSAPEG00000021686	shq1	92	55.272	ENSLACG00000014243	SHQ1	65	65.148	Latimeria_chalumnae
ENSAPEG00000021686	shq1	98	56.378	ENSLOCG00000009970	shq1	97	58.247	Lepisosteus_oculatus
ENSAPEG00000021686	shq1	67	43.447	ENSMFAG00000037396	-	73	43.155	Macaca_fascicularis
ENSAPEG00000021686	shq1	70	63.616	ENSMFAG00000039148	SHQ1	75	63.616	Macaca_fascicularis
ENSAPEG00000021686	shq1	62	62.468	ENSMMUG00000009571	SHQ1	70	62.468	Macaca_mulatta
ENSAPEG00000021686	shq1	70	44.342	ENSMMUG00000021761	-	73	43.155	Macaca_mulatta
ENSAPEG00000021686	shq1	70	63.616	ENSMNEG00000032667	SHQ1	75	63.616	Macaca_nemestrina
ENSAPEG00000021686	shq1	67	63.221	ENSMLEG00000038493	SHQ1	75	63.158	Mandrillus_leucophaeus
ENSAPEG00000021686	shq1	99	77.528	ENSMAMG00000023432	shq1	96	77.689	Mastacembelus_armatus
ENSAPEG00000021686	shq1	100	77.869	ENSMZEG00005008649	shq1	100	78.197	Maylandia_zebra
ENSAPEG00000021686	shq1	98	51.834	ENSMGAG00000009640	SHQ1	72	62.014	Meleagris_gallopavo
ENSAPEG00000021686	shq1	72	60.667	ENSMAUG00000022030	Shq1	79	60.444	Mesocricetus_auratus
ENSAPEG00000021686	shq1	91	53.403	ENSMICG00000009224	SHQ1	75	61.785	Microcebus_murinus
ENSAPEG00000021686	shq1	73	60.746	ENSMOCG00000017836	Shq1	79	60.667	Microtus_ochrogaster
ENSAPEG00000021686	shq1	99	73.667	ENSMMOG00000010569	shq1	100	74.376	Mola_mola
ENSAPEG00000021686	shq1	77	56.907	ENSMODG00000003926	SHQ1	78	59.589	Monodelphis_domestica
ENSAPEG00000021686	shq1	98	78.333	ENSMALG00000008870	shq1	99	77.815	Monopterus_albus
ENSAPEG00000021686	shq1	73	60.220	MGP_CAROLIEiJ_G0028689	Shq1	78	60.714	Mus_caroli
ENSAPEG00000021686	shq1	73	61.099	ENSMUSG00000035378	Shq1	78	61.798	Mus_musculus
ENSAPEG00000021686	shq1	70	62.471	MGP_PahariEiJ_G0022440	Shq1	71	67.500	Mus_pahari
ENSAPEG00000021686	shq1	77	59.748	MGP_SPRETEiJ_G0029717	Shq1	78	61.607	Mus_spretus
ENSAPEG00000021686	shq1	94	52.254	ENSMPUG00000017006	SHQ1	74	62.471	Mustela_putorius_furo
ENSAPEG00000021686	shq1	82	51.731	ENSMLUG00000013539	SHQ1	74	60.256	Myotis_lucifugus
ENSAPEG00000021686	shq1	91	46.620	ENSNGAG00000023317	Shq1	77	54.649	Nannospalax_galili
ENSAPEG00000021686	shq1	85	75.816	ENSNBRG00000024004	shq1	100	76.200	Neolamprologus_brichardi
ENSAPEG00000021686	shq1	91	53.242	ENSNLEG00000002731	SHQ1	75	62.700	Nomascus_leucogenys
ENSAPEG00000021686	shq1	74	58.333	ENSMEUG00000009350	-	70	58.333	Notamacropus_eugenii
ENSAPEG00000021686	shq1	94	52.076	ENSODEG00000009192	SHQ1	95	61.883	Octodon_degus
ENSAPEG00000021686	shq1	99	78.818	ENSONIG00000020264	shq1	100	79.146	Oreochromis_niloticus
ENSAPEG00000021686	shq1	90	54.433	ENSOCUG00000016695	SHQ1	74	62.700	Oryctolagus_cuniculus
ENSAPEG00000021686	shq1	99	65.282	ENSORLG00000023538	shq1	99	64.950	Oryzias_latipes
ENSAPEG00000021686	shq1	98	66.388	ENSORLG00020003697	shq1	98	66.054	Oryzias_latipes_hni
ENSAPEG00000021686	shq1	99	64.286	ENSORLG00015021040	shq1	99	64.120	Oryzias_latipes_hsok
ENSAPEG00000021686	shq1	95	68.448	ENSOMEG00000001225	shq1	97	67.931	Oryzias_melastigma
ENSAPEG00000021686	shq1	78	59.674	ENSOGAG00000003898	SHQ1	77	62.727	Otolemur_garnettii
ENSAPEG00000021686	shq1	93	52.971	ENSOARG00000009547	SHQ1	99	52.971	Ovis_aries
ENSAPEG00000021686	shq1	91	40.000	ENSPPAG00000043263	-	73	44.470	Pan_paniscus
ENSAPEG00000021686	shq1	92	53.741	ENSPPAG00000027714	SHQ1	75	62.929	Pan_paniscus
ENSAPEG00000021686	shq1	90	53.860	ENSPPRG00000004769	SHQ1	77	61.573	Panthera_pardus
ENSAPEG00000021686	shq1	90	51.423	ENSPTIG00000011478	SHQ1	76	58.182	Panthera_tigris_altaica
ENSAPEG00000021686	shq1	92	53.912	ENSPTRG00000015106	SHQ1	75	62.929	Pan_troglodytes
ENSAPEG00000021686	shq1	91	39.543	ENSPTRG00000048303	-	73	43.880	Pan_troglodytes
ENSAPEG00000021686	shq1	70	63.616	ENSPANG00000002881	SHQ1	75	63.616	Papio_anubis
ENSAPEG00000021686	shq1	69	70.379	ENSPKIG00000021517	shq1	72	70.416	Paramormyrops_kingsleyae
ENSAPEG00000021686	shq1	72	61.298	ENSPSIG00000005536	SHQ1	73	61.969	Pelodiscus_sinensis
ENSAPEG00000021686	shq1	99	62.295	ENSPMGG00000008838	shq1	99	62.993	Periophthalmus_magnuspinnatus
ENSAPEG00000021686	shq1	72	60.850	ENSPEMG00000000251	Shq1	78	60.314	Peromyscus_maniculatus_bairdii
ENSAPEG00000021686	shq1	70	56.621	ENSPMAG00000005372	shq1	98	57.534	Petromyzon_marinus
ENSAPEG00000021686	shq1	90	70.705	ENSPFOG00000003118	shq1	98	69.495	Poecilia_formosa
ENSAPEG00000021686	shq1	76	68.615	ENSPMEG00000011076	shq1	97	68.564	Poecilia_mexicana
ENSAPEG00000021686	shq1	83	69.109	ENSPREG00000000591	shq1	92	68.379	Poecilia_reticulata
ENSAPEG00000021686	shq1	92	53.741	ENSPPYG00000013717	SHQ1	75	63.158	Pongo_abelii
ENSAPEG00000021686	shq1	67	63.484	ENSPCAG00000009035	SHQ1	77	63.004	Procavia_capensis
ENSAPEG00000021686	shq1	90	55.080	ENSPVAG00000017392	SHQ1	76	62.471	Pteropus_vampyrus
ENSAPEG00000021686	shq1	100	78.361	ENSPNYG00000003878	shq1	100	78.689	Pundamilia_nyererei
ENSAPEG00000021686	shq1	98	57.003	ENSPNAG00000026840	shq1	99	56.585	Pygocentrus_nattereri
ENSAPEG00000021686	shq1	70	61.785	ENSRNOG00000005433	Shq1	72	61.785	Rattus_norvegicus
ENSAPEG00000021686	shq1	91	51.910	ENSRBIG00000026280	SHQ1	75	61.628	Rhinopithecus_bieti
ENSAPEG00000021686	shq1	91	53.688	ENSRROG00000034126	SHQ1	76	63.844	Rhinopithecus_roxellana
ENSAPEG00000021686	shq1	70	54.920	ENSSBOG00000021038	SHQ1	73	55.149	Saimiri_boliviensis_boliviensis
ENSAPEG00000021686	shq1	70	62.329	ENSSHAG00000015077	SHQ1	77	61.400	Sarcophilus_harrisii
ENSAPEG00000021686	shq1	99	60.133	ENSSFOG00015016241	shq1	99	60.133	Scleropages_formosus
ENSAPEG00000021686	shq1	100	78.852	ENSSMAG00000016151	shq1	100	78.525	Scophthalmus_maximus
ENSAPEG00000021686	shq1	100	78.896	ENSSDUG00000011986	shq1	100	80.195	Seriola_dumerili
ENSAPEG00000021686	shq1	100	77.687	ENSSLDG00000013908	shq1	100	78.827	Seriola_lalandi_dorsalis
ENSAPEG00000021686	shq1	93	45.656	ENSSARG00000007119	SHQ1	60	59.357	Sorex_araneus
ENSAPEG00000021686	shq1	75	51.266	ENSSPUG00000011526	-	65	60.172	Sphenodon_punctatus
ENSAPEG00000021686	shq1	92	53.671	ENSSSCG00000011518	SHQ1	77	61.384	Sus_scrofa
ENSAPEG00000021686	shq1	67	64.200	ENSTGUG00000009933	SHQ1	77	62.889	Taeniopygia_guttata
ENSAPEG00000021686	shq1	99	66.667	ENSTRUG00000009446	shq1	99	65.833	Takifugu_rubripes
ENSAPEG00000021686	shq1	67	73.902	ENSTNIG00000007354	shq1	98	72.398	Tetraodon_nigroviridis
ENSAPEG00000021686	shq1	90	54.196	ENSTTRG00000005320	SHQ1	77	61.915	Tursiops_truncatus
ENSAPEG00000021686	shq1	90	54.827	ENSUMAG00000024031	SHQ1	76	61.556	Ursus_maritimus
ENSAPEG00000021686	shq1	73	49.455	ENSVPAG00000004880	SHQ1	60	61.250	Vicugna_pacos
ENSAPEG00000021686	shq1	90	53.240	ENSVVUG00000013906	SHQ1	75	62.700	Vulpes_vulpes
ENSAPEG00000021686	shq1	70	61.894	ENSXETG00000032215	shq1	71	61.663	Xenopus_tropicalis