EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000021845 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 3032 bases
Position: chr17:34252908-34255939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000030728	LSM	PF01423.22	9.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000031549	-	366	-	ENSAPEP00000030728	121 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000021845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000021845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000021845	-	90	94.495	ENSAPEG00000021851	LSM10	84	94.495
ENSAPEG00000021845	-	60	34.667	ENSAPEG00000006238	lsm4	52	33.766
ENSAPEG00000021845	-	58	32.877	ENSAPEG00000020375	si:ch73-14h10.2	68	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000021845	-	98	67.797	ENSG00000181817	LSM10	96	67.797	Homo_sapiens
ENSAPEG00000021845	-	98	69.492	ENSAMEG00000019854	LSM10	96	69.492	Ailuropoda_melanoleuca
ENSAPEG00000021845	-	98	87.288	ENSACIG00000015420	oscp1a	78	87.288	Amphilophus_citrinellus
ENSAPEG00000021845	-	100	100.000	ENSAOCG00000014654	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000021845	-	100	100.000	ENSAOCG00000015618	LSM10	100	100.000	Amphiprion_ocellaris
ENSAPEG00000021845	-	90	94.495	ENSAOCG00000015607	LSM10	84	94.495	Amphiprion_ocellaris
ENSAPEG00000021845	-	94	85.965	ENSATEG00000006310	oscp1a	84	85.965	Anabas_testudineus
ENSAPEG00000021845	-	95	60.000	ENSACAG00000001231	LSM10	93	60.000	Anolis_carolinensis
ENSAPEG00000021845	-	98	66.102	ENSANAG00000031489	-	97	66.102	Aotus_nancymaae
ENSAPEG00000021845	-	98	67.797	ENSANAG00000018759	-	96	67.797	Aotus_nancymaae
ENSAPEG00000021845	-	100	85.124	ENSACLG00000004728	oscp1a	98	85.124	Astatotilapia_calliptera
ENSAPEG00000021845	-	100	73.554	ENSAMXG00000025301	oscp1a	100	73.554	Astyanax_mexicanus
ENSAPEG00000021845	-	98	67.797	ENSBTAG00000024096	LSM10	97	67.797	Bos_taurus
ENSAPEG00000021845	-	98	68.644	ENSCJAG00000044880	LSM10	96	68.644	Callithrix_jacchus
ENSAPEG00000021845	-	98	69.492	ENSCAFG00000003382	LSM10	96	69.492	Canis_familiaris
ENSAPEG00000021845	-	98	69.492	ENSCAFG00020008920	LSM10	96	69.492	Canis_lupus_dingo
ENSAPEG00000021845	-	98	67.797	ENSCHIG00000009398	LSM10	97	67.797	Capra_hircus
ENSAPEG00000021845	-	98	68.644	ENSCAPG00000012567	LSM10	96	68.644	Cavia_aperea
ENSAPEG00000021845	-	98	68.644	ENSCPOG00000039302	LSM10	96	68.644	Cavia_porcellus
ENSAPEG00000021845	-	98	65.254	ENSCCAG00000008378	-	96	65.254	Cebus_capucinus
ENSAPEG00000021845	-	98	67.797	ENSCCAG00000018913	-	96	67.797	Cebus_capucinus
ENSAPEG00000021845	-	95	68.696	ENSCATG00000006589	LSM10	93	68.696	Cercocebus_atys
ENSAPEG00000021845	-	98	68.644	ENSCLAG00000008633	LSM10	96	68.644	Chinchilla_lanigera
ENSAPEG00000021845	-	95	68.696	ENSCSAG00000000134	LSM10	93	68.696	Chlorocebus_sabaeus
ENSAPEG00000021845	-	98	65.833	ENSCHOG00000008615	LSM10	96	65.833	Choloepus_hoffmanni
ENSAPEG00000021845	-	83	33.000	ENSCSAVG00000001896	-	85	33.000	Ciona_savignyi
ENSAPEG00000021845	-	95	68.696	ENSCANG00000019928	LSM10	93	68.696	Colobus_angolensis_palliatus
ENSAPEG00000021845	-	95	69.565	ENSCGRG00001004317	-	94	69.565	Cricetulus_griseus_chok1gshd
ENSAPEG00000021845	-	94	62.931	ENSCGRG00001022673	-	93	62.931	Cricetulus_griseus_chok1gshd
ENSAPEG00000021845	-	94	62.931	ENSCGRG00000015514	-	93	62.931	Cricetulus_griseus_crigri
ENSAPEG00000021845	-	95	69.565	ENSCGRG00000014935	-	94	69.565	Cricetulus_griseus_crigri
ENSAPEG00000021845	-	99	83.333	ENSCSEG00000010374	oscp1a	81	83.333	Cynoglossus_semilaevis
ENSAPEG00000021845	-	98	84.746	ENSCVAG00000001536	oscp1a	89	84.746	Cyprinodon_variegatus
ENSAPEG00000021845	-	69	72.289	ENSDARG00000109563	CABZ01074453.1	96	72.289	Danio_rerio
ENSAPEG00000021845	-	98	73.729	ENSDARG00000101222	oscp1a	98	73.729	Danio_rerio
ENSAPEG00000021845	-	98	68.644	ENSDNOG00000036662	LSM10	96	68.644	Dasypus_novemcinctus
ENSAPEG00000021845	-	95	70.435	ENSDORG00000007579	Lsm10	93	70.435	Dipodomys_ordii
ENSAPEG00000021845	-	95	67.826	ENSETEG00000005703	LSM10	93	67.826	Echinops_telfairi
ENSAPEG00000021845	-	94	50.000	ENSEBUG00000001312	oscp1a	93	50.000	Eptatretus_burgeri
ENSAPEG00000021845	-	98	68.644	ENSEASG00005012194	LSM10	96	68.644	Equus_asinus_asinus
ENSAPEG00000021845	-	98	68.644	ENSECAG00000005071	LSM10	96	68.644	Equus_caballus
ENSAPEG00000021845	-	98	69.492	ENSEEUG00000012032	LSM10	96	69.492	Erinaceus_europaeus
ENSAPEG00000021845	-	98	80.508	ENSELUG00000007452	oscp1a	97	80.508	Esox_lucius
ENSAPEG00000021845	-	95	65.217	ENSFALG00000000851	LSM10	93	65.217	Ficedula_albicollis
ENSAPEG00000021845	-	98	69.492	ENSFDAG00000021056	LSM10	96	69.492	Fukomys_damarensis
ENSAPEG00000021845	-	93	80.702	ENSFHEG00000001058	oscp1a	98	80.702	Fundulus_heteroclitus
ENSAPEG00000021845	-	95	69.565	ENSGMOG00000019832	oscp1a	97	69.565	Gadus_morhua
ENSAPEG00000021845	-	97	66.667	ENSGALG00000002127	LSM10	95	66.667	Gallus_gallus
ENSAPEG00000021845	-	88	72.897	ENSGAFG00000016445	oscp1a	87	72.897	Gambusia_affinis
ENSAPEG00000021845	-	99	87.500	ENSGACG00000002329	oscp1a	98	87.500	Gasterosteus_aculeatus
ENSAPEG00000021845	-	93	67.257	ENSGAGG00000024848	LSM10	92	67.257	Gopherus_agassizii
ENSAPEG00000021845	-	98	67.797	ENSGGOG00000003556	LSM10	96	67.797	Gorilla_gorilla
ENSAPEG00000021845	-	100	85.950	ENSHBUG00000001722	oscp1a	98	85.950	Haplochromis_burtoni
ENSAPEG00000021845	-	98	66.949	ENSHGLG00000011625	LSM10	96	66.949	Heterocephalus_glaber_female
ENSAPEG00000021845	-	98	66.949	ENSHGLG00100001769	LSM10	96	66.949	Heterocephalus_glaber_male
ENSAPEG00000021845	-	89	72.222	ENSIPUG00000005808	oscp1a	94	72.222	Ictalurus_punctatus
ENSAPEG00000021845	-	98	69.492	ENSSTOG00000000606	LSM10	96	69.492	Ictidomys_tridecemlineatus
ENSAPEG00000021845	-	100	85.950	ENSKMAG00000012143	oscp1a	100	85.950	Kryptolebias_marmoratus
ENSAPEG00000021845	-	93	84.071	ENSLBEG00000017764	oscp1a	93	84.071	Labrus_bergylta
ENSAPEG00000021845	-	96	62.931	ENSLACG00000015904	LSM10	89	62.931	Latimeria_chalumnae
ENSAPEG00000021845	-	99	74.167	ENSLOCG00000018277	oscp1a	98	74.167	Lepisosteus_oculatus
ENSAPEG00000021845	-	95	69.565	ENSLAFG00000009600	LSM10	93	69.565	Loxodonta_africana
ENSAPEG00000021845	-	95	68.696	ENSMFAG00000009115	LSM10	93	68.696	Macaca_fascicularis
ENSAPEG00000021845	-	95	68.696	ENSMMUG00000017338	LSM10	93	68.696	Macaca_mulatta
ENSAPEG00000021845	-	95	68.696	ENSMNEG00000020023	LSM10	93	68.696	Macaca_nemestrina
ENSAPEG00000021845	-	95	68.696	ENSMLEG00000025150	LSM10	93	68.696	Mandrillus_leucophaeus
ENSAPEG00000021845	-	99	85.000	ENSMAMG00000004427	oscp1a	98	85.000	Mastacembelus_armatus
ENSAPEG00000021845	-	100	85.124	ENSMZEG00005026307	oscp1a	98	85.124	Maylandia_zebra
ENSAPEG00000021845	-	97	65.812	ENSMGAG00000015707	LSM10	95	65.812	Meleagris_gallopavo
ENSAPEG00000021845	-	95	70.435	ENSMAUG00000016624	Lsm10	94	70.435	Mesocricetus_auratus
ENSAPEG00000021845	-	95	69.565	ENSMOCG00000021943	Lsm10	94	69.565	Microtus_ochrogaster
ENSAPEG00000021845	-	94	87.719	ENSMMOG00000013597	oscp1a	85	87.719	Mola_mola
ENSAPEG00000021845	-	98	72.034	ENSMODG00000023328	LSM10	96	72.034	Monodelphis_domestica
ENSAPEG00000021845	-	54	84.615	ENSMALG00000012661	oscp1a	51	84.615	Monopterus_albus
ENSAPEG00000021845	-	95	69.565	MGP_CAROLIEiJ_G0026467	Lsm10	95	71.591	Mus_caroli
ENSAPEG00000021845	-	95	69.565	ENSMUSG00000050188	Lsm10	95	71.591	Mus_musculus
ENSAPEG00000021845	-	95	69.565	MGP_PahariEiJ_G0028798	Lsm10	95	71.591	Mus_pahari
ENSAPEG00000021845	-	95	69.565	MGP_SPRETEiJ_G0027446	Lsm10	95	71.591	Mus_spretus
ENSAPEG00000021845	-	98	69.492	ENSMPUG00000018593	LSM10	96	69.492	Mustela_putorius_furo
ENSAPEG00000021845	-	98	68.644	ENSMLUG00000023895	LSM10	96	68.644	Myotis_lucifugus
ENSAPEG00000021845	-	95	68.696	ENSNGAG00000015011	Lsm10	93	68.696	Nannospalax_galili
ENSAPEG00000021845	-	99	86.667	ENSNBRG00000014306	oscp1a	98	86.667	Neolamprologus_brichardi
ENSAPEG00000021845	-	98	67.797	ENSNLEG00000033754	LSM10	96	67.797	Nomascus_leucogenys
ENSAPEG00000021845	-	98	72.034	ENSMEUG00000006313	LSM10	96	72.034	Notamacropus_eugenii
ENSAPEG00000021845	-	95	69.565	ENSOPRG00000001699	LSM10	93	69.565	Ochotona_princeps
ENSAPEG00000021845	-	98	68.644	ENSODEG00000019161	LSM10	96	68.644	Octodon_degus
ENSAPEG00000021845	-	99	86.667	ENSONIG00000020904	oscp1a	98	86.667	Oreochromis_niloticus
ENSAPEG00000021845	-	99	67.769	ENSOANG00000002066	LSM10	98	67.769	Ornithorhynchus_anatinus
ENSAPEG00000021845	-	98	66.949	ENSOCUG00000005333	LSM10	96	66.949	Oryctolagus_cuniculus
ENSAPEG00000021845	-	100	80.992	ENSORLG00000009504	oscp1a	100	80.992	Oryzias_latipes
ENSAPEG00000021845	-	100	80.992	ENSORLG00020016201	oscp1a	100	80.992	Oryzias_latipes_hni
ENSAPEG00000021845	-	100	79.339	ENSORLG00015007794	oscp1a	100	79.339	Oryzias_latipes_hsok
ENSAPEG00000021845	-	98	69.492	ENSOGAG00000002653	LSM10	96	69.492	Otolemur_garnettii
ENSAPEG00000021845	-	98	67.797	ENSOARG00000009596	LSM10	97	67.797	Ovis_aries
ENSAPEG00000021845	-	98	67.797	ENSPPAG00000023465	LSM10	96	67.797	Pan_paniscus
ENSAPEG00000021845	-	98	68.644	ENSPPRG00000014619	LSM10	96	68.644	Panthera_pardus
ENSAPEG00000021845	-	98	68.644	ENSPTIG00000004613	LSM10	96	68.644	Panthera_tigris_altaica
ENSAPEG00000021845	-	98	67.797	ENSPTRG00000000539	LSM10	96	67.797	Pan_troglodytes
ENSAPEG00000021845	-	95	68.696	ENSPANG00000023172	LSM10	93	68.696	Papio_anubis
ENSAPEG00000021845	-	98	73.950	ENSPKIG00000003728	oscp1a	96	73.950	Paramormyrops_kingsleyae
ENSAPEG00000021845	-	93	65.487	ENSPSIG00000000590	LSM10	92	65.487	Pelodiscus_sinensis
ENSAPEG00000021845	-	63	71.053	ENSPMGG00000015718	oscp1a	99	71.053	Periophthalmus_magnuspinnatus
ENSAPEG00000021845	-	83	72.277	ENSPCIG00000014865	LSM10	74	72.277	Phascolarctos_cinereus
ENSAPEG00000021845	-	95	78.261	ENSPFOG00000020490	oscp1a	97	78.261	Poecilia_formosa
ENSAPEG00000021845	-	98	77.119	ENSPLAG00000016537	oscp1a	90	77.119	Poecilia_latipinna
ENSAPEG00000021845	-	93	77.876	ENSPMEG00000000174	oscp1a	98	77.876	Poecilia_mexicana
ENSAPEG00000021845	-	98	77.119	ENSPREG00000009899	oscp1a	90	77.119	Poecilia_reticulata
ENSAPEG00000021845	-	98	67.797	ENSPPYG00000001539	LSM10	96	67.797	Pongo_abelii
ENSAPEG00000021845	-	97	68.376	ENSPCAG00000002520	LSM10	96	68.376	Procavia_capensis
ENSAPEG00000021845	-	98	69.492	ENSPVAG00000008644	LSM10	96	69.492	Pteropus_vampyrus
ENSAPEG00000021845	-	100	85.950	ENSPNYG00000003138	oscp1a	98	85.950	Pundamilia_nyererei
ENSAPEG00000021845	-	100	75.207	ENSPNAG00000028829	oscp1a	100	75.207	Pygocentrus_nattereri
ENSAPEG00000021845	-	95	68.696	ENSRNOG00000025716	Lsm10	94	68.696	Rattus_norvegicus
ENSAPEG00000021845	-	95	68.696	ENSRBIG00000001561	LSM10	93	68.696	Rhinopithecus_bieti
ENSAPEG00000021845	-	95	68.696	ENSRROG00000011414	LSM10	93	68.696	Rhinopithecus_roxellana
ENSAPEG00000021845	-	98	67.797	ENSSBOG00000036413	-	96	67.797	Saimiri_boliviensis_boliviensis
ENSAPEG00000021845	-	98	72.034	ENSSHAG00000018056	LSM10	96	72.034	Sarcophilus_harrisii
ENSAPEG00000021845	-	98	76.271	ENSSFOG00015019954	lsm10	97	76.271	Scleropages_formosus
ENSAPEG00000021845	-	97	88.034	ENSSMAG00000001297	oscp1a	100	88.034	Scophthalmus_maximus
ENSAPEG00000021845	-	98	81.513	ENSSDUG00000007090	oscp1a	97	81.513	Seriola_dumerili
ENSAPEG00000021845	-	100	81.818	ENSSLDG00000000800	oscp1a	100	81.818	Seriola_lalandi_dorsalis
ENSAPEG00000021845	-	98	67.500	ENSSARG00000004211	LSM10	96	67.500	Sorex_araneus
ENSAPEG00000021845	-	100	90.909	ENSSPAG00000009229	oscp1a	100	90.909	Stegastes_partitus
ENSAPEG00000021845	-	98	67.797	ENSSSCG00000038916	LSM10	96	67.797	Sus_scrofa
ENSAPEG00000021845	-	96	66.379	ENSTGUG00000001602	-	95	66.379	Taeniopygia_guttata
ENSAPEG00000021845	-	96	65.517	ENSTGUG00000001600	-	95	65.517	Taeniopygia_guttata
ENSAPEG00000021845	-	98	82.203	ENSTRUG00000010531	oscp1a	95	82.203	Takifugu_rubripes
ENSAPEG00000021845	-	96	68.966	ENSTBEG00000016674	LSM10	94	68.966	Tupaia_belangeri
ENSAPEG00000021845	-	98	69.492	ENSUAMG00000020265	LSM10	96	69.492	Ursus_americanus
ENSAPEG00000021845	-	98	69.492	ENSUMAG00000001438	LSM10	54	69.492	Ursus_maritimus
ENSAPEG00000021845	-	98	69.492	ENSVVUG00000023209	LSM10	96	69.492	Vulpes_vulpes
ENSAPEG00000021845	-	98	62.712	ENSXETG00000027631	lsm10	96	62.712	Xenopus_tropicalis
ENSAPEG00000021845	-	96	75.862	ENSXCOG00000018776	oscp1a	72	76.522	Xiphophorus_couchianus
ENSAPEG00000021845	-	93	76.786	ENSXMAG00000019963	oscp1a	90	76.786	Xiphophorus_maculatus